Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC4.29□□□□□ -1.72
GABPAQ06546 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC4.29□□□□□ -1.72
GABPAQ06546 PNRC2P1-201ENST00000423940 420 ntBASIC4.29□□□□□ -1.72
GABPAQ06546 SDCBPP2-201ENST00000424643 885 ntBASIC4.29□□□□□ -1.72
GABPAQ06546 VN1R42P-201ENST00000424651 344 ntBASIC4.29□□□□□ -1.72
GABPAQ06546 SEC63P1-201ENST00000425785 1258 ntBASIC4.29□□□□□ -1.72
GABPAQ06546 ATP5JP1-201ENST00000431631 322 ntBASIC4.29□□□□□ -1.72
GABPAQ06546 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.29□□□□□ -1.72
GABPAQ06546 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.29□□□□□ -1.72
GABPAQ06546 AP000949.1-201ENST00000438328 629 ntBASIC4.29□□□□□ -1.72
GABPAQ06546 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC4.29□□□□□ -1.72
GABPAQ06546 HMGB3P22-202ENST00000451823 572 ntBASIC4.29□□□□□ -1.72
GABPAQ06546 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
GABPAQ06546 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
GABPAQ06546 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC4.29□□□□□ -1.72
GABPAQ06546 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC4.29□□□□□ -1.72
GABPAQ06546 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.29□□□□□ -1.72
GABPAQ06546 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC4.29□□□□□ -1.72
GABPAQ06546 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC4.29□□□□□ -1.72
GABPAQ06546 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.29□□□□□ -1.72
GABPAQ06546 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC4.29□□□□□ -1.72
GABPAQ06546 AC133963.2-201ENST00000513686 578 ntBASIC4.29□□□□□ -1.72
GABPAQ06546 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC4.29□□□□□ -1.72
GABPAQ06546 OR8I1P-201ENST00000529291 931 ntBASIC4.29□□□□□ -1.72
GABPAQ06546 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC4.29□□□□□ -1.72
GABPAQ06546 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC4.29□□□□□ -1.72
GABPAQ06546 AC008638.3-201ENST00000603341 463 ntBASIC4.29□□□□□ -1.72
GABPAQ06546 AL163642.2-201ENST00000604722 1019 ntBASIC4.29□□□□□ -1.72
GABPAQ06546 AC079610.2-201ENST00000604818 690 ntBASIC4.29□□□□□ -1.72
GABPAQ06546 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC4.29□□□□□ -1.72
GABPAQ06546 MIR7973-1-201ENST00000614683 76 ntBASIC4.29□□□□□ -1.72
GABPAQ06546 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC4.29□□□□□ -1.72
GABPAQ06546 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
GABPAQ06546 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.29□□□□□ -1.72
GABPAQ06546 LINC02471-203ENST00000641941 4752 ntBASIC4.29□□□□□ -1.72
GABPAQ06546 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.29□□□□□ -1.72
GABPAQ06546 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.29□□□□□ -1.72
GABPAQ06546 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
GABPAQ06546 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC4.28□□□□□ -1.72
GABPAQ06546 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
GABPAQ06546 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
GABPAQ06546 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
GABPAQ06546 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.28□□□□□ -1.72
GABPAQ06546 AC007685.1-201ENST00000329806 452 ntBASIC4.28□□□□□ -1.72
GABPAQ06546 RNA5SP387-201ENST00000364226 106 ntBASIC4.28□□□□□ -1.72
GABPAQ06546 RNU6-609P-201ENST00000365459 107 ntBASIC4.28□□□□□ -1.72
GABPAQ06546 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
GABPAQ06546 MIR490-201ENST00000384865 128 ntBASIC4.28□□□□□ -1.72
GABPAQ06546 RNU2-65P-201ENST00000410162 185 ntBASIC4.28□□□□□ -1.72
GABPAQ06546 DBIP2-201ENST00000419076 262 ntBASIC4.28□□□□□ -1.72
GABPAQ06546 AC005189.1-201ENST00000431286 310 ntBASIC4.28□□□□□ -1.72
GABPAQ06546 MED6P1-201ENST00000439659 713 ntBASIC4.28□□□□□ -1.72
GABPAQ06546 AL353748.1-201ENST00000440753 474 ntBASIC4.28□□□□□ -1.72
GABPAQ06546 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
GABPAQ06546 RPL7P49-201ENST00000471402 708 ntBASIC4.28□□□□□ -1.72
GABPAQ06546 RPS26P15-201ENST00000488067 348 ntBASIC4.28□□□□□ -1.72
GABPAQ06546 AC139783.2-201ENST00000504847 1145 ntBASIC4.28□□□□□ -1.72
GABPAQ06546 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
GABPAQ06546 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC4.28□□□□□ -1.72
GABPAQ06546 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC4.28□□□□□ -1.72
GABPAQ06546 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
GABPAQ06546 OR5AK3P-201ENST00000527486 1297 ntBASIC4.28□□□□□ -1.72
GABPAQ06546 AP002812.4-201ENST00000532139 286 ntBASIC4.28□□□□□ -1.72
GABPAQ06546 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC4.28□□□□□ -1.72
GABPAQ06546 AC106785.3-201ENST00000564064 847 ntBASIC4.28□□□□□ -1.72
GABPAQ06546 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC4.28□□□□□ -1.72
GABPAQ06546 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
GABPAQ06546 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC4.28□□□□□ -1.72
GABPAQ06546 AC098483.2-201ENST00000603158 454 ntBASIC4.28□□□□□ -1.72
GABPAQ06546 AC092574.1-201ENST00000609771 420 ntBASIC4.28□□□□□ -1.72
GABPAQ06546 AL163051.2-201ENST00000618976 735 ntBASIC4.28□□□□□ -1.72
GABPAQ06546 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC4.28□□□□□ -1.72
GABPAQ06546 AC068254.2-201ENST00000623938 3577 ntBASIC4.28□□□□□ -1.72
GABPAQ06546 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
GABPAQ06546 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
GABPAQ06546 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
GABPAQ06546 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
GABPAQ06546 AC074029.4-201ENST00000624796 1859 ntBASIC4.28□□□□□ -1.72
GABPAQ06546 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC4.28□□□□□ -1.72
GABPAQ06546 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.28□□□□□ -1.72
GABPAQ06546 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
GABPAQ06546 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.28□□□□□ -1.73
GABPAQ06546 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
GABPAQ06546 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
GABPAQ06546 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC4.27□□□□□ -1.73
GABPAQ06546 PRO1804-201ENST00000623780 2050 ntBASIC4.27□□□□□ -1.73
GABPAQ06546 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
GABPAQ06546 KPNA2P2-201ENST00000419546 1489 ntBASIC4.27□□□□□ -1.73
GABPAQ06546 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
GABPAQ06546 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
GABPAQ06546 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
GABPAQ06546 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
GABPAQ06546 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
GABPAQ06546 MIR218-2-201ENST00000385006 110 ntBASIC4.27□□□□□ -1.73
GABPAQ06546 MTHFD2P2-201ENST00000407725 247 ntBASIC4.27□□□□□ -1.73
GABPAQ06546 MTND4P11-201ENST00000417020 1058 ntBASIC4.27□□□□□ -1.73
GABPAQ06546 AC004552.1-201ENST00000419089 348 ntBASIC4.27□□□□□ -1.73
GABPAQ06546 RPS24P8-201ENST00000431490 402 ntBASIC4.27□□□□□ -1.73
GABPAQ06546 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC4.27□□□□□ -1.73
GABPAQ06546 RPS26P3-201ENST00000470205 348 ntBASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms