Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.49□□□□□ -1.85
HMGCS1Q01581 MAPK10-372ENST00000641954 3413 ntBASIC3.49□□□□□ -1.85
HMGCS1Q01581 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
HMGCS1Q01581 MIR423-201ENST00000362201 94 ntBASIC3.49□□□□□ -1.85
HMGCS1Q01581 RNA5SP42-201ENST00000364278 115 ntBASIC3.49□□□□□ -1.85
HMGCS1Q01581 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
HMGCS1Q01581 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
HMGCS1Q01581 MTHFD2P2-201ENST00000407725 247 ntBASIC3.49□□□□□ -1.85
HMGCS1Q01581 UBE2V1P15-201ENST00000407776 448 ntBASIC3.49□□□□□ -1.85
HMGCS1Q01581 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.49□□□□□ -1.85
HMGCS1Q01581 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.49□□□□□ -1.85
HMGCS1Q01581 AL357078.2-201ENST00000416486 427 ntBASIC3.49□□□□□ -1.85
HMGCS1Q01581 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.49□□□□□ -1.85
HMGCS1Q01581 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC3.49□□□□□ -1.85
HMGCS1Q01581 TPMTP4-201ENST00000450749 678 ntBASIC3.49□□□□□ -1.85
HMGCS1Q01581 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
HMGCS1Q01581 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC3.49□□□□□ -1.85
HMGCS1Q01581 AC012170.1-201ENST00000495139 359 ntBASIC3.49□□□□□ -1.85
HMGCS1Q01581 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC3.49□□□□□ -1.85
HMGCS1Q01581 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC3.49□□□□□ -1.85
HMGCS1Q01581 AC021146.1-201ENST00000511202 716 ntBASIC3.49□□□□□ -1.85
HMGCS1Q01581 MTND4LP31-201ENST00000514859 294 ntBASIC3.49□□□□□ -1.85
HMGCS1Q01581 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.49□□□□□ -1.85
HMGCS1Q01581 AC007991.1-201ENST00000522680 631 ntBASIC3.49□□□□□ -1.85
HMGCS1Q01581 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC3.49□□□□□ -1.85
HMGCS1Q01581 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC3.49□□□□□ -1.85
HMGCS1Q01581 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.49□□□□□ -1.85
HMGCS1Q01581 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC3.49□□□□□ -1.85
HMGCS1Q01581 AGGF1P8-201ENST00000562979 1000 ntBASIC3.49□□□□□ -1.85
HMGCS1Q01581 CYP2C60P-201ENST00000566088 139 ntBASIC3.49□□□□□ -1.85
HMGCS1Q01581 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC3.49□□□□□ -1.85
HMGCS1Q01581 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC3.49□□□□□ -1.85
HMGCS1Q01581 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.49□□□□□ -1.85
HMGCS1Q01581 AC244505.7-201ENST00000599675 272 ntBASIC3.49□□□□□ -1.85
HMGCS1Q01581 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC3.49□□□□□ -1.85
HMGCS1Q01581 AL450270.1-201ENST00000606160 391 ntBASIC3.49□□□□□ -1.85
HMGCS1Q01581 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
HMGCS1Q01581 AC066616.2-201ENST00000559334 1481 ntBASIC3.48□□□□□ -1.85
HMGCS1Q01581 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
HMGCS1Q01581 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
HMGCS1Q01581 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
HMGCS1Q01581 OR4A15-201ENST00000314706 1035 ntBASIC3.48□□□□□ -1.85
HMGCS1Q01581 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
HMGCS1Q01581 RNA5SP235-201ENST00000365411 114 ntBASIC3.48□□□□□ -1.85
HMGCS1Q01581 CGA-201ENST00000369582 729 ntTSL 5 BASIC3.48□□□□□ -1.85
HMGCS1Q01581 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC3.48□□□□□ -1.85
HMGCS1Q01581 RNU6-317P-201ENST00000384031 107 ntBASIC3.48□□□□□ -1.85
HMGCS1Q01581 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
HMGCS1Q01581 RPL32P23-201ENST00000397237 405 ntBASIC3.48□□□□□ -1.85
HMGCS1Q01581 RN7SKP156-201ENST00000410308 342 ntBASIC3.48□□□□□ -1.85
HMGCS1Q01581 RN7SKP159-201ENST00000410657 292 ntBASIC3.48□□□□□ -1.85
HMGCS1Q01581 SNORA57.3-201ENST00000411095 141 ntBASIC3.48□□□□□ -1.85
HMGCS1Q01581 AC006989.1-201ENST00000427212 131 ntBASIC3.48□□□□□ -1.85
HMGCS1Q01581 AL160175.1-201ENST00000428124 247 ntBASIC3.48□□□□□ -1.85
HMGCS1Q01581 MTCO1P52-201ENST00000433928 531 ntBASIC3.48□□□□□ -1.85
HMGCS1Q01581 KCTD10P1-201ENST00000434203 625 ntBASIC3.48□□□□□ -1.85
HMGCS1Q01581 RPS26P40-201ENST00000435209 294 ntBASIC3.48□□□□□ -1.85
HMGCS1Q01581 PPIAP17-201ENST00000438507 471 ntBASIC3.48□□□□□ -1.85
HMGCS1Q01581 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC3.48□□□□□ -1.85
HMGCS1Q01581 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.48□□□□□ -1.85
HMGCS1Q01581 AC010655.1-201ENST00000449336 292 ntBASIC3.48□□□□□ -1.85
HMGCS1Q01581 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.48□□□□□ -1.85
HMGCS1Q01581 SNORD108-201ENST00000459332 71 ntBASIC3.48□□□□□ -1.85
HMGCS1Q01581 AL133162.1-201ENST00000463228 453 ntBASIC3.48□□□□□ -1.85
HMGCS1Q01581 FTH1P2-201ENST00000466086 412 ntBASIC3.48□□□□□ -1.85
HMGCS1Q01581 AC084357.1-201ENST00000473404 255 ntBASIC3.48□□□□□ -1.85
HMGCS1Q01581 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.48□□□□□ -1.85
HMGCS1Q01581 AC093663.2-201ENST00000484625 313 ntBASIC3.48□□□□□ -1.85
HMGCS1Q01581 RPL30P11-201ENST00000495304 339 ntBASIC3.48□□□□□ -1.85
HMGCS1Q01581 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
HMGCS1Q01581 HMGB1P21-201ENST00000502313 581 ntBASIC3.48□□□□□ -1.85
HMGCS1Q01581 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC3.48□□□□□ -1.85
HMGCS1Q01581 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.48□□□□□ -1.85
HMGCS1Q01581 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.48□□□□□ -1.85
HMGCS1Q01581 NDUFB4P9-201ENST00000511646 388 ntBASIC3.48□□□□□ -1.85
HMGCS1Q01581 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.48□□□□□ -1.85
HMGCS1Q01581 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC3.48□□□□□ -1.85
HMGCS1Q01581 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
HMGCS1Q01581 AC087272.1-201ENST00000523624 533 ntBASIC3.48□□□□□ -1.85
HMGCS1Q01581 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
HMGCS1Q01581 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.48□□□□□ -1.85
HMGCS1Q01581 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC3.48□□□□□ -1.85
HMGCS1Q01581 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.48□□□□□ -1.85
HMGCS1Q01581 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC3.48□□□□□ -1.85
HMGCS1Q01581 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.48□□□□□ -1.85
HMGCS1Q01581 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC3.48□□□□□ -1.85
HMGCS1Q01581 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC3.48□□□□□ -1.85
HMGCS1Q01581 AC006077.1-201ENST00000604746 343 ntBASIC3.48□□□□□ -1.85
HMGCS1Q01581 AL049634.3-201ENST00000604968 457 ntBASIC3.48□□□□□ -1.85
HMGCS1Q01581 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC3.48□□□□□ -1.85
HMGCS1Q01581 MIR7973-1-201ENST00000614683 76 ntBASIC3.48□□□□□ -1.85
HMGCS1Q01581 AL732618.1-201ENST00000623251 301 ntBASIC3.48□□□□□ -1.85
HMGCS1Q01581 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC3.48□□□□□ -1.85
HMGCS1Q01581 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC3.48□□□□□ -1.85
HMGCS1Q01581 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
HMGCS1Q01581 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.48□□□□□ -1.85
HMGCS1Q01581 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
HMGCS1Q01581 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.47□□□□□ -1.85
HMGCS1Q01581 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.47□□□□□ -1.85
HMGCS1Q01581 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms