Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 EIF4EBP2P3-201ENST00000403144 334 ntBASIC4.23□□□□□ -1.73
CCNA1P78396 Z92545.1-201ENST00000411782 234 ntBASIC4.23□□□□□ -1.73
CCNA1P78396 AC096638.2-201ENST00000434965 711 ntBASIC4.23□□□□□ -1.73
CCNA1P78396 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC4.23□□□□□ -1.73
CCNA1P78396 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC4.23□□□□□ -1.73
CCNA1P78396 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC4.23□□□□□ -1.73
CCNA1P78396 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CCNA1P78396 AP002345.1-201ENST00000456493 928 ntBASIC4.23□□□□□ -1.73
CCNA1P78396 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC4.23□□□□□ -1.73
CCNA1P78396 AC084198.1-201ENST00000477747 402 ntBASIC4.23□□□□□ -1.73
CCNA1P78396 HSPD1P15-201ENST00000505573 1122 ntBASIC4.23□□□□□ -1.73
CCNA1P78396 AC025554.1-201ENST00000505641 188 ntBASIC4.23□□□□□ -1.73
CCNA1P78396 IGKV2-36-201ENST00000519999 223 ntBASIC4.23□□□□□ -1.73
CCNA1P78396 OR7E13P-201ENST00000526052 910 ntBASIC4.23□□□□□ -1.73
CCNA1P78396 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC4.23□□□□□ -1.73
CCNA1P78396 AC025946.2-201ENST00000603398 234 ntBASIC4.23□□□□□ -1.73
CCNA1P78396 AL163642.2-201ENST00000604722 1019 ntBASIC4.23□□□□□ -1.73
CCNA1P78396 AL392112.1-201ENST00000605115 829 ntBASIC4.23□□□□□ -1.73
CCNA1P78396 AC110792.4-201ENST00000609843 298 ntBASIC4.23□□□□□ -1.73
CCNA1P78396 RMST_9.1-201ENST00000619945 193 ntBASIC4.23□□□□□ -1.73
CCNA1P78396 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC4.23□□□□□ -1.73
CCNA1P78396 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC4.23□□□□□ -1.73
CCNA1P78396 ABBA01000935.2-201ENST00000637477 838 ntBASIC4.23□□□□□ -1.73
CCNA1P78396 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC4.23□□□□□ -1.73
CCNA1P78396 MAPK10-373ENST00000641983 6772 ntBASIC4.23□□□□□ -1.73
CCNA1P78396 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CCNA1P78396 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.22□□□□□ -1.73
CCNA1P78396 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
CCNA1P78396 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CCNA1P78396 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC4.22□□□□□ -1.73
CCNA1P78396 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CCNA1P78396 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CCNA1P78396 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CCNA1P78396 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC4.22□□□□□ -1.73
CCNA1P78396 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
CCNA1P78396 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC4.22□□□□□ -1.73
CCNA1P78396 MIR153-1-201ENST00000384914 90 ntBASIC4.22□□□□□ -1.73
CCNA1P78396 MIR93-201ENST00000385024 80 ntBASIC4.22□□□□□ -1.73
CCNA1P78396 MIR513A2-201ENST00000385249 127 ntBASIC4.22□□□□□ -1.73
CCNA1P78396 HNRNPDP2-201ENST00000406475 478 ntBASIC4.22□□□□□ -1.73
CCNA1P78396 AC234782.4-201ENST00000417646 1048 ntBASIC4.22□□□□□ -1.73
CCNA1P78396 AC004552.1-201ENST00000419089 348 ntBASIC4.22□□□□□ -1.73
CCNA1P78396 AC245054.1-201ENST00000420944 258 ntBASIC4.22□□□□□ -1.73
CCNA1P78396 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.22□□□□□ -1.73
CCNA1P78396 OR5AW1P-201ENST00000426334 1006 ntBASIC4.22□□□□□ -1.73
CCNA1P78396 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CCNA1P78396 TVP23BP2-201ENST00000455082 615 ntBASIC4.22□□□□□ -1.73
CCNA1P78396 AP000873.1-201ENST00000463987 400 ntBASIC4.22□□□□□ -1.73
CCNA1P78396 RPS26P3-201ENST00000470205 348 ntBASIC4.22□□□□□ -1.73
CCNA1P78396 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
CCNA1P78396 AC090543.2-201ENST00000483963 348 ntBASIC4.22□□□□□ -1.73
CCNA1P78396 AC004057.1-201ENST00000485827 348 ntBASIC4.22□□□□□ -1.73
CCNA1P78396 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC4.22□□□□□ -1.73
CCNA1P78396 RPL31P61-201ENST00000496160 376 ntBASIC4.22□□□□□ -1.73
CCNA1P78396 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC4.22□□□□□ -1.73
CCNA1P78396 AC110792.2-201ENST00000510278 224 ntBASIC4.22□□□□□ -1.73
CCNA1P78396 AC104997.1-201ENST00000519761 717 ntBASIC4.22□□□□□ -1.73
CCNA1P78396 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC4.22□□□□□ -1.73
CCNA1P78396 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC4.22□□□□□ -1.73
CCNA1P78396 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.22□□□□□ -1.73
CCNA1P78396 AC007458.1-201ENST00000542812 373 ntBASIC4.22□□□□□ -1.73
CCNA1P78396 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC4.22□□□□□ -1.73
CCNA1P78396 AL121766.1-201ENST00000547436 487 ntBASIC4.22□□□□□ -1.73
CCNA1P78396 NACA-211ENST00000548563 827 ntTSL 5 BASIC4.22□□□□□ -1.73
CCNA1P78396 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC4.22□□□□□ -1.73
CCNA1P78396 AC107016.1-201ENST00000550463 337 ntBASIC4.22□□□□□ -1.73
CCNA1P78396 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC4.22□□□□□ -1.73
CCNA1P78396 NCAPGP2-201ENST00000557911 754 ntBASIC4.22□□□□□ -1.73
CCNA1P78396 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC4.22□□□□□ -1.73
CCNA1P78396 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC4.22□□□□□ -1.73
CCNA1P78396 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CCNA1P78396 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC4.22□□□□□ -1.73
CCNA1P78396 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CCNA1P78396 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CCNA1P78396 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC4.22□□□□□ -1.73
CCNA1P78396 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CCNA1P78396 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CCNA1P78396 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CCNA1P78396 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CCNA1P78396 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CCNA1P78396 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
CCNA1P78396 IPO8P1-201ENST00000455509 3109 ntBASIC4.21□□□□□ -1.73
CCNA1P78396 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.73
CCNA1P78396 AL049737.1-201ENST00000413920 1403 ntBASIC4.21□□□□□ -1.73
CCNA1P78396 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC4.21□□□□□ -1.73
CCNA1P78396 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC4.21□□□□□ -1.73
CCNA1P78396 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.21□□□□□ -1.74
CCNA1P78396 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.21□□□□□ -1.74
CCNA1P78396 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
CCNA1P78396 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
CCNA1P78396 RHOT1P2-201ENST00000366423 333 ntBASIC4.21□□□□□ -1.74
CCNA1P78396 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CCNA1P78396 MIR490-201ENST00000384865 128 ntBASIC4.21□□□□□ -1.74
CCNA1P78396 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CCNA1P78396 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC4.21□□□□□ -1.74
CCNA1P78396 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC4.21□□□□□ -1.74
CCNA1P78396 AC010655.1-201ENST00000449336 292 ntBASIC4.21□□□□□ -1.74
CCNA1P78396 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC4.21□□□□□ -1.74
CCNA1P78396 AC093770.1-201ENST00000511559 571 ntBASIC4.21□□□□□ -1.74
CCNA1P78396 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms