Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC3.06□□□□□ -1.92
UBA52P62987 SETD6P1-201ENST00000444575 317 ntBASIC3.06□□□□□ -1.92
UBA52P62987 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.06□□□□□ -1.92
UBA52P62987 PPIAP3-201ENST00000450588 505 ntBASIC3.06□□□□□ -1.92
UBA52P62987 CYCSP35-201ENST00000451978 304 ntBASIC3.06□□□□□ -1.92
UBA52P62987 CFTRP1-201ENST00000456646 183 ntBASIC3.06□□□□□ -1.92
UBA52P62987 HMGN1P18-201ENST00000457642 277 ntBASIC3.06□□□□□ -1.92
UBA52P62987 AC078785.3-201ENST00000476607 425 ntBASIC3.06□□□□□ -1.92
UBA52P62987 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.06□□□□□ -1.92
UBA52P62987 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
UBA52P62987 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
UBA52P62987 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.06□□□□□ -1.92
UBA52P62987 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.06□□□□□ -1.92
UBA52P62987 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC3.06□□□□□ -1.92
UBA52P62987 SNORA64.4-201ENST00000516632 81 ntBASIC3.06□□□□□ -1.92
UBA52P62987 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.06□□□□□ -1.92
UBA52P62987 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
UBA52P62987 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.06□□□□□ -1.92
UBA52P62987 MIR5195-201ENST00000583555 115 ntBASIC3.06□□□□□ -1.92
UBA52P62987 MIR3922-201ENST00000585192 84 ntBASIC3.06□□□□□ -1.92
UBA52P62987 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.06□□□□□ -1.92
UBA52P62987 MIR7975-201ENST00000619350 68 ntBASIC3.06□□□□□ -1.92
UBA52P62987 AC004943.3-201ENST00000624116 600 ntBASIC3.06□□□□□ -1.92
UBA52P62987 CR382285.2-201ENST00000624662 1495 ntBASIC3.06□□□□□ -1.92
UBA52P62987 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.06□□□□□ -1.92
UBA52P62987 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
UBA52P62987 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.06□□□□□ -1.92
UBA52P62987 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
UBA52P62987 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.05□□□□□ -1.92
UBA52P62987 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.05□□□□□ -1.92
UBA52P62987 AL592494.2-201ENST00000425455 1548 ntBASIC3.05□□□□□ -1.92
UBA52P62987 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.05□□□□□ -1.92
UBA52P62987 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
UBA52P62987 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.05□□□□□ -1.92
UBA52P62987 NR1H5P-201ENST00000452683 1377 ntBASIC3.05□□□□□ -1.92
UBA52P62987 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC3.05□□□□□ -1.92
UBA52P62987 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
UBA52P62987 RNVU1-14-201ENST00000384770 164 ntBASIC3.05□□□□□ -1.92
UBA52P62987 AL138785.1-201ENST00000425821 331 ntBASIC3.05□□□□□ -1.92
UBA52P62987 AL390879.2-203ENST00000426943 1121 ntBASIC3.05□□□□□ -1.92
UBA52P62987 AL159987.2-201ENST00000432754 307 ntBASIC3.05□□□□□ -1.92
UBA52P62987 Z74696.2-201ENST00000436514 498 ntBASIC3.05□□□□□ -1.92
UBA52P62987 AC105402.2-201ENST00000438503 358 ntBASIC3.05□□□□□ -1.92
UBA52P62987 AC074367.1-201ENST00000438685 1125 ntBASIC3.05□□□□□ -1.92
UBA52P62987 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.05□□□□□ -1.92
UBA52P62987 AL358832.1-201ENST00000497800 389 ntBASIC3.05□□□□□ -1.92
UBA52P62987 KCTD9P5-201ENST00000504141 1170 ntBASIC3.05□□□□□ -1.92
UBA52P62987 RNA5SP208-201ENST00000516156 78 ntBASIC3.05□□□□□ -1.92
UBA52P62987 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.05□□□□□ -1.92
UBA52P62987 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.05□□□□□ -1.92
UBA52P62987 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC3.05□□□□□ -1.92
UBA52P62987 ZNF415P1-201ENST00000582279 1166 ntBASIC3.05□□□□□ -1.92
UBA52P62987 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.05□□□□□ -1.92
UBA52P62987 AC116447.1-201ENST00000613153 453 ntBASIC3.05□□□□□ -1.92
UBA52P62987 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC3.05□□□□□ -1.92
UBA52P62987 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.05□□□□□ -1.92
UBA52P62987 AL732372.2-225ENST00000642124 456 ntBASIC3.05□□□□□ -1.92
UBA52P62987 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.05□□□□□ -1.92
UBA52P62987 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
UBA52P62987 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.05□□□□□ -1.92
UBA52P62987 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.05□□□□□ -1.92
UBA52P62987 AC000367.1-201ENST00000452711 1766 ntBASIC3.05□□□□□ -1.92
UBA52P62987 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
UBA52P62987 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.04□□□□□ -1.92
UBA52P62987 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
UBA52P62987 OR51B4-201ENST00000380224 933 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
UBA52P62987 MIR199A2-201ENST00000385289 110 ntBASIC3.04□□□□□ -1.92
UBA52P62987 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
UBA52P62987 HMGB3P23-201ENST00000414981 585 ntBASIC3.04□□□□□ -1.92
UBA52P62987 RPS7P15-201ENST00000415804 584 ntBASIC3.04□□□□□ -1.92
UBA52P62987 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.04□□□□□ -1.92
UBA52P62987 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC3.04□□□□□ -1.92
UBA52P62987 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.04□□□□□ -1.92
UBA52P62987 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.04□□□□□ -1.92
UBA52P62987 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.04□□□□□ -1.92
UBA52P62987 AL035551.1-201ENST00000446931 348 ntBASIC3.04□□□□□ -1.92
UBA52P62987 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC3.04□□□□□ -1.92
UBA52P62987 HIGD1AP10-201ENST00000527837 282 ntBASIC3.04□□□□□ -1.92
UBA52P62987 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC3.04□□□□□ -1.92
UBA52P62987 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC3.04□□□□□ -1.92
UBA52P62987 OR5D17P-201ENST00000531492 978 ntBASIC3.04□□□□□ -1.92
UBA52P62987 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC3.04□□□□□ -1.92
UBA52P62987 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.04□□□□□ -1.92
UBA52P62987 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.04□□□□□ -1.92
UBA52P62987 AC123786.2-201ENST00000603459 275 ntBASIC3.04□□□□□ -1.92
UBA52P62987 AL442067.2-201ENST00000614033 363 ntBASIC3.04□□□□□ -1.92
UBA52P62987 AC110801.1-201ENST00000623590 212 ntBASIC3.04□□□□□ -1.92
UBA52P62987 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.04□□□□□ -1.92
UBA52P62987 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
UBA52P62987 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
UBA52P62987 AC007496.3-201ENST00000624987 3443 ntBASIC3.04□□□□□ -1.92
UBA52P62987 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.04□□□□□ -1.92
UBA52P62987 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
UBA52P62987 SEPT7P7-201ENST00000420492 1301 ntBASIC3.03□□□□□ -1.92
UBA52P62987 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.03□□□□□ -1.92
UBA52P62987 RNA5SP51-201ENST00000364750 119 ntBASIC3.03□□□□□ -1.92
UBA52P62987 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.03□□□□□ -1.92
UBA52P62987 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC3.03□□□□□ -1.92
UBA52P62987 RNU6-603P-201ENST00000411403 107 ntBASIC3.03□□□□□ -1.92
UBA52P62987 ATP5A1P2-201ENST00000412323 255 ntBASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms