Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.16□□□□□ -1.58
GFRA1P56159 RPS15AP40-201ENST00000419621 391 ntBASIC5.16□□□□□ -1.58
GFRA1P56159 AC069213.2-201ENST00000420238 366 ntBASIC5.16□□□□□ -1.58
GFRA1P56159 AC113412.1-201ENST00000425840 504 ntBASIC5.16□□□□□ -1.58
GFRA1P56159 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5.16□□□□□ -1.58
GFRA1P56159 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.16□□□□□ -1.58
GFRA1P56159 GTF2IP20-201ENST00000431663 360 ntBASIC5.16□□□□□ -1.58
GFRA1P56159 GPR143P-201ENST00000434155 205 ntBASIC5.16□□□□□ -1.58
GFRA1P56159 AL353597.2-202ENST00000434901 373 ntBASIC5.16□□□□□ -1.58
GFRA1P56159 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC5.16□□□□□ -1.58
GFRA1P56159 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC5.16□□□□□ -1.58
GFRA1P56159 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC5.16□□□□□ -1.58
GFRA1P56159 AC092001.1-201ENST00000453012 261 ntBASIC5.16□□□□□ -1.58
GFRA1P56159 YWHAEP1-201ENST00000453697 763 ntBASIC5.16□□□□□ -1.58
GFRA1P56159 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
GFRA1P56159 AMD1P1-201ENST00000457220 922 ntBASIC5.16□□□□□ -1.58
GFRA1P56159 PMCHL2-203ENST00000457791 237 ntBASIC5.16□□□□□ -1.58
GFRA1P56159 AC022364.2-201ENST00000457963 554 ntBASIC5.16□□□□□ -1.58
GFRA1P56159 RPS20P21-201ENST00000466859 343 ntBASIC5.16□□□□□ -1.58
GFRA1P56159 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC5.16□□□□□ -1.58
GFRA1P56159 HMGN1P12-201ENST00000499125 195 ntBASIC5.16□□□□□ -1.58
GFRA1P56159 ACTR3BP4-201ENST00000503033 1244 ntBASIC5.16□□□□□ -1.58
GFRA1P56159 NAF1-205ENST00000509434 385 ntTSL 3 BASIC5.16□□□□□ -1.58
GFRA1P56159 AC016065.2-201ENST00000514530 444 ntBASIC5.16□□□□□ -1.58
GFRA1P56159 MTCO1P35-201ENST00000515270 228 ntBASIC5.16□□□□□ -1.58
GFRA1P56159 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC5.16□□□□□ -1.58
GFRA1P56159 AC100784.1-201ENST00000522790 310 ntBASIC5.16□□□□□ -1.58
GFRA1P56159 AC022616.3-201ENST00000523940 148 ntBASIC5.16□□□□□ -1.58
GFRA1P56159 AP003072.2-201ENST00000527756 676 ntBASIC5.16□□□□□ -1.58
GFRA1P56159 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC5.16□□□□□ -1.58
GFRA1P56159 AP003497.1-201ENST00000528472 562 ntBASIC5.16□□□□□ -1.58
GFRA1P56159 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.16□□□□□ -1.58
GFRA1P56159 AC034105.3-201ENST00000565294 442 ntBASIC5.16□□□□□ -1.58
GFRA1P56159 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.16□□□□□ -1.58
GFRA1P56159 MIR4505-201ENST00000582238 73 ntBASIC5.16□□□□□ -1.58
GFRA1P56159 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC5.16□□□□□ -1.58
GFRA1P56159 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
GFRA1P56159 AC087283.1-201ENST00000604029 1074 ntBASIC5.16□□□□□ -1.58
GFRA1P56159 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
GFRA1P56159 AC090607.5-201ENST00000615692 224 ntBASIC5.16□□□□□ -1.58
GFRA1P56159 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
GFRA1P56159 CU639417.4-201ENST00000623928 207 ntBASIC5.16□□□□□ -1.58
GFRA1P56159 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC5.16□□□□□ -1.58
GFRA1P56159 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC5.16□□□□□ -1.58
GFRA1P56159 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
GFRA1P56159 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
GFRA1P56159 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
GFRA1P56159 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC5.16□□□□□ -1.58
GFRA1P56159 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.16□□□□□ -1.58
GFRA1P56159 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.16□□□□□ -1.58
GFRA1P56159 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
GFRA1P56159 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
GFRA1P56159 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
GFRA1P56159 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC5.15□□□□□ -1.58
GFRA1P56159 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.15□□□□□ -1.58
GFRA1P56159 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.15□□□□□ -1.58
GFRA1P56159 SRRM1P3-201ENST00000426911 2678 ntBASIC5.15□□□□□ -1.58
GFRA1P56159 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC5.15□□□□□ -1.58
GFRA1P56159 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.58
GFRA1P56159 CKAP2P1-201ENST00000555477 2049 ntBASIC5.15□□□□□ -1.58
GFRA1P56159 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.15□□□□□ -1.58
GFRA1P56159 RNU6-1097P-201ENST00000363586 107 ntBASIC5.15□□□□□ -1.59
GFRA1P56159 RNA5SP131-201ENST00000365452 119 ntBASIC5.15□□□□□ -1.59
GFRA1P56159 RNA5SP30-201ENST00000365552 115 ntBASIC5.15□□□□□ -1.59
GFRA1P56159 RNU6-146P-201ENST00000384602 108 ntBASIC5.15□□□□□ -1.59
GFRA1P56159 MIR323B-201ENST00000385269 82 ntBASIC5.15□□□□□ -1.59
GFRA1P56159 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
GFRA1P56159 RPL31P2-201ENST00000413849 377 ntBASIC5.15□□□□□ -1.59
GFRA1P56159 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC5.15□□□□□ -1.59
GFRA1P56159 AC007283.2-201ENST00000424739 197 ntBASIC5.15□□□□□ -1.59
GFRA1P56159 CRIP1P1-201ENST00000427567 185 ntBASIC5.15□□□□□ -1.59
GFRA1P56159 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
GFRA1P56159 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.15□□□□□ -1.59
GFRA1P56159 AC093019.1-201ENST00000443135 252 ntBASIC5.15□□□□□ -1.59
GFRA1P56159 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC5.15□□□□□ -1.59
GFRA1P56159 EEF1B2P6-201ENST00000445713 673 ntBASIC5.15□□□□□ -1.59
GFRA1P56159 SLC25A18P1-201ENST00000449385 454 ntBASIC5.15□□□□□ -1.59
GFRA1P56159 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC5.15□□□□□ -1.59
GFRA1P56159 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.15□□□□□ -1.59
GFRA1P56159 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC5.15□□□□□ -1.59
GFRA1P56159 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC5.15□□□□□ -1.59
GFRA1P56159 SSX6-203ENST00000509958 336 ntTSL 3 BASIC5.15□□□□□ -1.59
GFRA1P56159 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.15□□□□□ -1.59
GFRA1P56159 RNU6-941P-201ENST00000516346 108 ntBASIC5.15□□□□□ -1.59
GFRA1P56159 IGLVIV-53-201ENST00000520107 367 ntBASIC5.15□□□□□ -1.59
GFRA1P56159 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC5.15□□□□□ -1.59
GFRA1P56159 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC5.15□□□□□ -1.59
GFRA1P56159 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.15□□□□□ -1.59
GFRA1P56159 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC5.15□□□□□ -1.59
GFRA1P56159 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC5.15□□□□□ -1.59
GFRA1P56159 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC5.15□□□□□ -1.59
GFRA1P56159 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC5.15□□□□□ -1.59
GFRA1P56159 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC5.15□□□□□ -1.59
GFRA1P56159 AL109766.1-201ENST00000555080 552 ntBASIC5.15□□□□□ -1.59
GFRA1P56159 AC022404.1-201ENST00000555320 273 ntBASIC5.15□□□□□ -1.59
GFRA1P56159 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC5.15□□□□□ -1.59
GFRA1P56159 MIR3146-201ENST00000580367 79 ntBASIC5.15□□□□□ -1.59
GFRA1P56159 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC5.15□□□□□ -1.59
GFRA1P56159 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC5.15□□□□□ -1.59
GFRA1P56159 AC007566.2-201ENST00000603642 413 ntBASIC5.15□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms