Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC3.79□□□□□ -1.8
CDH6P55285 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC3.79□□□□□ -1.8
CDH6P55285 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.79□□□□□ -1.8
CDH6P55285 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.79□□□□□ -1.8
CDH6P55285 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC3.79□□□□□ -1.8
CDH6P55285 AC012531.5-201ENST00000611375 151 ntBASIC3.79□□□□□ -1.8
CDH6P55285 AL732372.2-225ENST00000642124 456 ntBASIC3.79□□□□□ -1.8
CDH6P55285 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CDH6P55285 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CDH6P55285 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.79□□□□□ -1.8
CDH6P55285 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.79□□□□□ -1.8
CDH6P55285 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CDH6P55285 ZNF33CP-201ENST00000432492 2030 ntBASIC3.78□□□□□ -1.8
CDH6P55285 MTND4P10-201ENST00000446199 1363 ntBASIC3.78□□□□□ -1.8
CDH6P55285 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CDH6P55285 AC007656.2-201ENST00000624902 4547 ntBASIC3.78□□□□□ -1.8
CDH6P55285 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CDH6P55285 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CDH6P55285 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
CDH6P55285 RNU6-328P-201ENST00000390887 106 ntBASIC3.78□□□□□ -1.8
CDH6P55285 AL445189.1-201ENST00000405722 338 ntBASIC3.78□□□□□ -1.8
CDH6P55285 MTHFD2P2-201ENST00000407725 247 ntBASIC3.78□□□□□ -1.8
CDH6P55285 AC004987.3-201ENST00000413879 771 ntBASIC3.78□□□□□ -1.8
CDH6P55285 AL035458.1-201ENST00000433096 585 ntBASIC3.78□□□□□ -1.8
CDH6P55285 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC3.78□□□□□ -1.8
CDH6P55285 RPL23AP62-201ENST00000463396 453 ntBASIC3.78□□□□□ -1.8
CDH6P55285 AC007688.1-201ENST00000475592 759 ntBASIC3.78□□□□□ -1.8
CDH6P55285 RPL21P103-201ENST00000479921 488 ntBASIC3.78□□□□□ -1.8
CDH6P55285 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC3.78□□□□□ -1.8
CDH6P55285 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.78□□□□□ -1.8
CDH6P55285 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.78□□□□□ -1.8
CDH6P55285 Vault.1-201ENST00000516474 102 ntBASIC3.78□□□□□ -1.8
CDH6P55285 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC3.78□□□□□ -1.8
CDH6P55285 AC007991.1-201ENST00000522680 631 ntBASIC3.78□□□□□ -1.8
CDH6P55285 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.78□□□□□ -1.8
CDH6P55285 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC3.78□□□□□ -1.8
CDH6P55285 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.78□□□□□ -1.8
CDH6P55285 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.78□□□□□ -1.8
CDH6P55285 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC3.78□□□□□ -1.8
CDH6P55285 AC141257.3-201ENST00000572906 215 ntBASIC3.78□□□□□ -1.8
CDH6P55285 AP000919.1-202ENST00000581139 1264 ntBASIC3.78□□□□□ -1.8
CDH6P55285 AC093227.2-201ENST00000589357 285 ntBASIC3.78□□□□□ -1.8
CDH6P55285 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC3.78□□□□□ -1.8
CDH6P55285 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC3.78□□□□□ -1.8
CDH6P55285 AL732618.1-201ENST00000623251 301 ntBASIC3.78□□□□□ -1.8
CDH6P55285 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.78□□□□□ -1.8
CDH6P55285 MFSD8-236ENST00000641509 4050 ntBASIC3.78□□□□□ -1.8
CDH6P55285 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
CDH6P55285 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CDH6P55285 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CDH6P55285 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
CDH6P55285 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CDH6P55285 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
CDH6P55285 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CDH6P55285 METTL21EP-201ENST00000298105 713 ntBASIC3.77□□□□□ -1.81
CDH6P55285 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CDH6P55285 RNA5SP391-201ENST00000363456 119 ntBASIC3.77□□□□□ -1.81
CDH6P55285 RNU1-64P-201ENST00000365443 163 ntBASIC3.77□□□□□ -1.81
CDH6P55285 AC083799.1-201ENST00000366451 910 ntBASIC3.77□□□□□ -1.81
CDH6P55285 CGA-201ENST00000369582 729 ntTSL 5 BASIC3.77□□□□□ -1.81
CDH6P55285 RNU6-98P-201ENST00000384173 107 ntBASIC3.77□□□□□ -1.81
CDH6P55285 RN7SKP159-201ENST00000410657 292 ntBASIC3.77□□□□□ -1.81
CDH6P55285 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.77□□□□□ -1.81
CDH6P55285 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.77□□□□□ -1.81
CDH6P55285 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
CDH6P55285 AC006989.1-201ENST00000427212 131 ntBASIC3.77□□□□□ -1.81
CDH6P55285 AC008065.1-201ENST00000428525 348 ntBASIC3.77□□□□□ -1.81
CDH6P55285 RPL7P29-201ENST00000437151 728 ntBASIC3.77□□□□□ -1.81
CDH6P55285 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.77□□□□□ -1.81
CDH6P55285 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.77□□□□□ -1.81
CDH6P55285 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.77□□□□□ -1.81
CDH6P55285 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC3.77□□□□□ -1.81
CDH6P55285 TVP23BP2-201ENST00000455082 615 ntBASIC3.77□□□□□ -1.81
CDH6P55285 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC3.77□□□□□ -1.81
CDH6P55285 RNU6-775P-201ENST00000459318 96 ntBASIC3.77□□□□□ -1.81
CDH6P55285 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
CDH6P55285 OR9N1P-202ENST00000494289 481 ntBASIC3.77□□□□□ -1.81
CDH6P55285 AP001086.1-201ENST00000494882 321 ntBASIC3.77□□□□□ -1.81
CDH6P55285 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC3.77□□□□□ -1.81
CDH6P55285 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC3.77□□□□□ -1.81
CDH6P55285 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC3.77□□□□□ -1.81
CDH6P55285 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC3.77□□□□□ -1.81
CDH6P55285 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.77□□□□□ -1.81
CDH6P55285 AC106785.1-201ENST00000565935 262 ntBASIC3.77□□□□□ -1.81
CDH6P55285 LLPHP1-201ENST00000603571 367 ntBASIC3.77□□□□□ -1.81
CDH6P55285 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.77□□□□□ -1.81
CDH6P55285 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.77□□□□□ -1.81
CDH6P55285 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CDH6P55285 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.77□□□□□ -1.81
CDH6P55285 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.76□□□□□ -1.81
CDH6P55285 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.76□□□□□ -1.81
CDH6P55285 DCAF13P1-201ENST00000495256 1330 ntBASIC3.76□□□□□ -1.81
CDH6P55285 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
CDH6P55285 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
CDH6P55285 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
CDH6P55285 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC3.76□□□□□ -1.81
CDH6P55285 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC3.76□□□□□ -1.81
CDH6P55285 RNU6-40P-201ENST00000384254 107 ntBASIC3.76□□□□□ -1.81
CDH6P55285 FABP12P1-201ENST00000401911 322 ntBASIC3.76□□□□□ -1.81
CDH6P55285 AL590704.1-201ENST00000402856 794 ntBASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms