Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 AC090246.1-201ENST00000616499 426 ntBASIC4.24□□□□□ -1.73
VCPP55072 FP236240.3-201ENST00000623061 327 ntBASIC4.24□□□□□ -1.73
VCPP55072 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.24□□□□□ -1.73
VCPP55072 AP001486.2-201ENST00000561652 5113 ntBASIC4.24□□□□□ -1.73
VCPP55072 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
VCPP55072 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
VCPP55072 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
VCPP55072 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
VCPP55072 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
VCPP55072 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC4.23□□□□□ -1.73
VCPP55072 RNU6-452P-201ENST00000384406 107 ntBASIC4.23□□□□□ -1.73
VCPP55072 MIR124-3-201ENST00000384866 87 ntBASIC4.23□□□□□ -1.73
VCPP55072 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
VCPP55072 ZNF603P-201ENST00000405613 487 ntBASIC4.23□□□□□ -1.73
VCPP55072 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC4.23□□□□□ -1.73
VCPP55072 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.23□□□□□ -1.73
VCPP55072 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC4.23□□□□□ -1.73
VCPP55072 RPS29P4-201ENST00000414733 161 ntBASIC4.23□□□□□ -1.73
VCPP55072 MTND2P15-201ENST00000418575 892 ntBASIC4.23□□□□□ -1.73
VCPP55072 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC4.23□□□□□ -1.73
VCPP55072 AL031736.2-201ENST00000426573 787 ntBASIC4.23□□□□□ -1.73
VCPP55072 AL160175.1-201ENST00000428124 247 ntBASIC4.23□□□□□ -1.73
VCPP55072 TBCAP1-201ENST00000436520 327 ntBASIC4.23□□□□□ -1.73
VCPP55072 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
VCPP55072 NANOGP10-201ENST00000453325 895 ntBASIC4.23□□□□□ -1.73
VCPP55072 MTND2P6-201ENST00000455337 1030 ntBASIC4.23□□□□□ -1.73
VCPP55072 MTND2P30-201ENST00000456663 382 ntBASIC4.23□□□□□ -1.73
VCPP55072 OR9M1P-201ENST00000459641 921 ntBASIC4.23□□□□□ -1.73
VCPP55072 RPL38P1-201ENST00000460914 211 ntBASIC4.23□□□□□ -1.73
VCPP55072 AC108729.2-201ENST00000476543 840 ntBASIC4.23□□□□□ -1.73
VCPP55072 AL358832.1-201ENST00000497800 389 ntBASIC4.23□□□□□ -1.73
VCPP55072 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
VCPP55072 AC093853.1-201ENST00000515689 483 ntBASIC4.23□□□□□ -1.73
VCPP55072 RN7SKP13-201ENST00000515933 244 ntBASIC4.23□□□□□ -1.73
VCPP55072 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC4.23□□□□□ -1.73
VCPP55072 AC004923.2-201ENST00000529649 369 ntBASIC4.23□□□□□ -1.73
VCPP55072 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC4.23□□□□□ -1.73
VCPP55072 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.23□□□□□ -1.73
VCPP55072 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC4.23□□□□□ -1.73
VCPP55072 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC4.23□□□□□ -1.73
VCPP55072 AC012417.1-201ENST00000582307 1039 ntBASIC4.23□□□□□ -1.73
VCPP55072 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC4.23□□□□□ -1.73
VCPP55072 MIR5684-201ENST00000585074 65 ntBASIC4.23□□□□□ -1.73
VCPP55072 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
VCPP55072 AC092474.3-201ENST00000603022 568 ntBASIC4.23□□□□□ -1.73
VCPP55072 AL671309.1-201ENST00000603750 544 ntBASIC4.23□□□□□ -1.73
VCPP55072 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC4.23□□□□□ -1.73
VCPP55072 AC006213.5-201ENST00000619673 288 ntBASIC4.23□□□□□ -1.73
VCPP55072 C2orf27A-204ENST00000623058 969 ntBASIC4.23□□□□□ -1.73
VCPP55072 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.23□□□□□ -1.73
VCPP55072 AC027287.1-201ENST00000553115 1453 ntBASIC4.23□□□□□ -1.73
VCPP55072 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4.23□□□□□ -1.73
VCPP55072 DCAF13P3-201ENST00000561147 1334 ntBASIC4.22□□□□□ -1.73
VCPP55072 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
VCPP55072 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
VCPP55072 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
VCPP55072 RAD1P1-201ENST00000231383 813 ntBASIC4.22□□□□□ -1.73
VCPP55072 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
VCPP55072 RPL21P17-201ENST00000397467 475 ntBASIC4.22□□□□□ -1.73
VCPP55072 HIST1H2APS3-201ENST00000403259 134 ntBASIC4.22□□□□□ -1.73
VCPP55072 RNU2-72P-201ENST00000411175 163 ntBASIC4.22□□□□□ -1.73
VCPP55072 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.22□□□□□ -1.73
VCPP55072 ARL2BPP3-201ENST00000421226 480 ntBASIC4.22□□□□□ -1.73
VCPP55072 MORF4L1P7-201ENST00000426038 703 ntBASIC4.22□□□□□ -1.73
VCPP55072 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC4.22□□□□□ -1.73
VCPP55072 AC073508.1-201ENST00000428866 656 ntBASIC4.22□□□□□ -1.73
VCPP55072 RPL17P35-201ENST00000432217 549 ntBASIC4.22□□□□□ -1.73
VCPP55072 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC4.22□□□□□ -1.73
VCPP55072 HMGB1P5-202ENST00000451497 985 ntBASIC4.22□□□□□ -1.73
VCPP55072 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.22□□□□□ -1.73
VCPP55072 RPS29P2-201ENST00000479278 136 ntBASIC4.22□□□□□ -1.73
VCPP55072 AL049873.1-201ENST00000480540 376 ntBASIC4.22□□□□□ -1.73
VCPP55072 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC4.22□□□□□ -1.73
VCPP55072 AL360157.1-201ENST00000565962 87 ntBASIC4.22□□□□□ -1.73
VCPP55072 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC4.22□□□□□ -1.73
VCPP55072 MTND4LP24-201ENST00000572277 291 ntBASIC4.22□□□□□ -1.73
VCPP55072 MIR4513-201ENST00000581077 86 ntBASIC4.22□□□□□ -1.73
VCPP55072 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC4.22□□□□□ -1.73
VCPP55072 AL451044.1-201ENST00000604867 238 ntBASIC4.22□□□□□ -1.73
VCPP55072 KATNBL1P5-201ENST00000605015 517 ntBASIC4.22□□□□□ -1.73
VCPP55072 AK6-205ENST00000618980 483 ntTSL 2 BASIC4.22□□□□□ -1.73
VCPP55072 MIR7975-201ENST00000619350 68 ntBASIC4.22□□□□□ -1.73
VCPP55072 AC103858.2-201ENST00000621471 543 ntBASIC4.22□□□□□ -1.73
VCPP55072 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.22□□□□□ -1.73
VCPP55072 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.22□□□□□ -1.73
VCPP55072 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
VCPP55072 AC017007.4-201ENST00000503353 1352 ntBASIC4.22□□□□□ -1.73
VCPP55072 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
VCPP55072 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.22□□□□□ -1.73
VCPP55072 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.73
VCPP55072 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
VCPP55072 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
VCPP55072 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.21□□□□□ -1.74
VCPP55072 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
VCPP55072 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
VCPP55072 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
VCPP55072 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
VCPP55072 SNORD35B-201ENST00000363660 87 ntBASIC4.21□□□□□ -1.74
VCPP55072 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
VCPP55072 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms