Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC6.13□□□□□ -1.43
RNF144AP50876 AC068305.1-201ENST00000497406 726 ntBASIC6.13□□□□□ -1.43
RNF144AP50876 AC022493.2-201ENST00000506122 481 ntBASIC6.13□□□□□ -1.43
RNF144AP50876 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC6.13□□□□□ -1.43
RNF144AP50876 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC6.13□□□□□ -1.43
RNF144AP50876 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC6.13□□□□□ -1.43
RNF144AP50876 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC6.13□□□□□ -1.43
RNF144AP50876 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC6.13□□□□□ -1.43
RNF144AP50876 LINC02392-202ENST00000549313 574 ntTSL 4 BASIC6.13□□□□□ -1.43
RNF144AP50876 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
RNF144AP50876 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC6.13□□□□□ -1.43
RNF144AP50876 LYRM1-208ENST00000567954 460 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
RNF144AP50876 AC090615.1-201ENST00000577519 154 ntBASIC6.13□□□□□ -1.43
RNF144AP50876 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC6.13□□□□□ -1.43
RNF144AP50876 AL136084.2-222ENST00000589105 885 ntTSL 5 BASIC6.13□□□□□ -1.43
RNF144AP50876 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
RNF144AP50876 SNORD96A-201ENST00000606577 79 ntBASIC6.13□□□□□ -1.43
RNF144AP50876 AC103705.1-201ENST00000619013 241 ntBASIC6.13□□□□□ -1.43
RNF144AP50876 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC6.13□□□□□ -1.43
RNF144AP50876 MRPL57P1-201ENST00000621486 265 ntBASIC6.13□□□□□ -1.43
RNF144AP50876 AL357559.1-201ENST00000622228 274 ntBASIC6.13□□□□□ -1.43
RNF144AP50876 AC073488.9-201ENST00000631601 754 ntBASIC6.13□□□□□ -1.43
RNF144AP50876 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC6.13□□□□□ -1.43
RNF144AP50876 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC6.13□□□□□ -1.43
RNF144AP50876 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC6.13□□□□□ -1.43
RNF144AP50876 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC6.13□□□□□ -1.43
RNF144AP50876 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC6.13□□□□□ -1.43
RNF144AP50876 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC6.13□□□□□ -1.43
RNF144AP50876 HSPA8P14-201ENST00000552265 1805 ntBASIC6.13□□□□□ -1.43
RNF144AP50876 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC6.13□□□□□ -1.43
RNF144AP50876 AL731566.1-201ENST00000620490 1937 ntBASIC6.13□□□□□ -1.43
RNF144AP50876 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
RNF144AP50876 AC107081.3-201ENST00000612715 2034 ntBASIC6.13□□□□□ -1.43
RNF144AP50876 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
RNF144AP50876 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
RNF144AP50876 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
RNF144AP50876 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
RNF144AP50876 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
RNF144AP50876 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC6.12□□□□□ -1.43
RNF144AP50876 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
RNF144AP50876 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
RNF144AP50876 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
RNF144AP50876 IARS-213ENST00000627121 4587 ntTSL 5 BASIC6.12□□□□□ -1.43
RNF144AP50876 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC6.12□□□□□ -1.43
RNF144AP50876 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
RNF144AP50876 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC6.12□□□□□ -1.43
RNF144AP50876 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
RNF144AP50876 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC6.12□□□□□ -1.43
RNF144AP50876 STAG3L4-201ENST00000352103 530 ntBASIC6.12□□□□□ -1.43
RNF144AP50876 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
RNF144AP50876 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
RNF144AP50876 Y_RNA.60-201ENST00000362831 98 ntBASIC6.12□□□□□ -1.43
RNF144AP50876 SNORD115-7-201ENST00000365306 82 ntBASIC6.12□□□□□ -1.43
RNF144AP50876 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC6.12□□□□□ -1.43
RNF144AP50876 RNU6-225P-201ENST00000384613 103 ntBASIC6.12□□□□□ -1.43
RNF144AP50876 SNORA7A-201ENST00000384765 139 ntBASIC6.12□□□□□ -1.43
RNF144AP50876 TRBV6-7-201ENST00000390373 344 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
RNF144AP50876 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
RNF144AP50876 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
RNF144AP50876 RNU2-23P-201ENST00000410545 195 ntBASIC6.12□□□□□ -1.43
RNF144AP50876 RN7SKP205-201ENST00000410999 307 ntBASIC6.12□□□□□ -1.43
RNF144AP50876 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC6.12□□□□□ -1.43
RNF144AP50876 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC6.12□□□□□ -1.43
RNF144AP50876 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
RNF144AP50876 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC6.12□□□□□ -1.43
RNF144AP50876 RPL21P89-201ENST00000444021 467 ntBASIC6.12□□□□□ -1.43
RNF144AP50876 LAMTOR5P1-201ENST00000444290 270 ntBASIC6.12□□□□□ -1.43
RNF144AP50876 AC147651.1-201ENST00000453149 572 ntTSL 2 BASIC6.12□□□□□ -1.43
RNF144AP50876 SNORD127-201ENST00000458892 86 ntBASIC6.12□□□□□ -1.43
RNF144AP50876 AC011476.1-201ENST00000466725 307 ntBASIC6.12□□□□□ -1.43
RNF144AP50876 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC6.12□□□□□ -1.43
RNF144AP50876 RPL21P93-201ENST00000480465 489 ntBASIC6.12□□□□□ -1.43
RNF144AP50876 AC005017.1-201ENST00000482002 490 ntBASIC6.12□□□□□ -1.43
RNF144AP50876 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
RNF144AP50876 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC6.12□□□□□ -1.43
RNF144AP50876 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC6.12□□□□□ -1.43
RNF144AP50876 HIGD1AP13-201ENST00000509878 289 ntBASIC6.12□□□□□ -1.43
RNF144AP50876 RNU6-475P-201ENST00000516073 104 ntBASIC6.12□□□□□ -1.43
RNF144AP50876 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
RNF144AP50876 AC022616.4-201ENST00000522985 181 ntBASIC6.12□□□□□ -1.43
RNF144AP50876 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC6.12□□□□□ -1.43
RNF144AP50876 RN7SL199P-201ENST00000578752 281 ntBASIC6.12□□□□□ -1.43
RNF144AP50876 RN7SL656P-201ENST00000579044 281 ntBASIC6.12□□□□□ -1.43
RNF144AP50876 RN7SL404P-201ENST00000582421 281 ntBASIC6.12□□□□□ -1.43
RNF144AP50876 AC010139.1-201ENST00000596963 445 ntTSL 5 BASIC6.12□□□□□ -1.43
RNF144AP50876 AL031320.1-201ENST00000604177 357 ntBASIC6.12□□□□□ -1.43
RNF144AP50876 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC6.12□□□□□ -1.43
RNF144AP50876 AP001486.3-201ENST00000615334 372 ntBASIC6.12□□□□□ -1.43
RNF144AP50876 AC025034.2-201ENST00000623264 286 ntBASIC6.12□□□□□ -1.43
RNF144AP50876 AC244517.6-202ENST00000623884 566 ntAPPRIS P1 TSL 4 BASIC6.12□□□□□ -1.43
RNF144AP50876 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC6.12□□□□□ -1.43
RNF144AP50876 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
RNF144AP50876 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC6.12□□□□□ -1.43
RNF144AP50876 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
RNF144AP50876 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC6.12□□□□□ -1.43
RNF144AP50876 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
RNF144AP50876 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC6.12□□□□□ -1.43
RNF144AP50876 MEF2C-254ENST00000637732 3347 ntTSL 5 BASIC6.12□□□□□ -1.43
RNF144AP50876 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
RNF144AP50876 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC6.11□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms