Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.06□□□□□ -1.76
APOBEC1P41238 CU459211.1-201ENST00000635667 749 ntBASIC4.06□□□□□ -1.76
APOBEC1P41238 AC093535.2-201ENST00000624769 2326 ntBASIC4.06□□□□□ -1.76
APOBEC1P41238 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
APOBEC1P41238 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
APOBEC1P41238 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
APOBEC1P41238 SAGE2P-201ENST00000420011 2126 ntBASIC4.06□□□□□ -1.76
APOBEC1P41238 SGO1P2-201ENST00000429458 1589 ntBASIC4.06□□□□□ -1.76
APOBEC1P41238 MTND5P28-201ENST00000438005 1594 ntBASIC4.06□□□□□ -1.76
APOBEC1P41238 AC104118.1-201ENST00000607625 1589 ntBASIC4.06□□□□□ -1.76
APOBEC1P41238 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
APOBEC1P41238 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
APOBEC1P41238 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.05□□□□□ -1.76
APOBEC1P41238 ASNSP1-201ENST00000518311 1939 ntBASIC4.05□□□□□ -1.76
APOBEC1P41238 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
APOBEC1P41238 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.05□□□□□ -1.76
APOBEC1P41238 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
APOBEC1P41238 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
APOBEC1P41238 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC4.05□□□□□ -1.76
APOBEC1P41238 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
APOBEC1P41238 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.05□□□□□ -1.76
APOBEC1P41238 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.05□□□□□ -1.76
APOBEC1P41238 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
APOBEC1P41238 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
APOBEC1P41238 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC4.05□□□□□ -1.76
APOBEC1P41238 RNU1-94P-201ENST00000362627 173 ntBASIC4.05□□□□□ -1.76
APOBEC1P41238 RNA5SP307-201ENST00000362863 116 ntBASIC4.05□□□□□ -1.76
APOBEC1P41238 RNU1-20P-201ENST00000363314 162 ntBASIC4.05□□□□□ -1.76
APOBEC1P41238 Y_RNA.169-201ENST00000363745 96 ntBASIC4.05□□□□□ -1.76
APOBEC1P41238 RNA5SP151-201ENST00000365632 117 ntBASIC4.05□□□□□ -1.76
APOBEC1P41238 RNU1-44P-201ENST00000384453 163 ntBASIC4.05□□□□□ -1.76
APOBEC1P41238 MIR192-201ENST00000384915 110 ntBASIC4.05□□□□□ -1.76
APOBEC1P41238 MIR506-201ENST00000384998 124 ntBASIC4.05□□□□□ -1.76
APOBEC1P41238 CASP3-203ENST00000393588 677 ntTSL 4 BASIC4.05□□□□□ -1.76
APOBEC1P41238 GLULP6-201ENST00000399502 913 ntBASIC4.05□□□□□ -1.76
APOBEC1P41238 RPS4XP9-201ENST00000405151 780 ntBASIC4.05□□□□□ -1.76
APOBEC1P41238 EIF4A1P3-201ENST00000411521 244 ntBASIC4.05□□□□□ -1.76
APOBEC1P41238 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC4.05□□□□□ -1.76
APOBEC1P41238 AC009237.10-201ENST00000414112 510 ntBASIC4.05□□□□□ -1.76
APOBEC1P41238 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC4.05□□□□□ -1.76
APOBEC1P41238 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC4.05□□□□□ -1.76
APOBEC1P41238 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC4.05□□□□□ -1.76
APOBEC1P41238 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.05□□□□□ -1.76
APOBEC1P41238 TIMM9P2-201ENST00000419324 266 ntBASIC4.05□□□□□ -1.76
APOBEC1P41238 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.05□□□□□ -1.76
APOBEC1P41238 MTND4P20-201ENST00000424125 869 ntBASIC4.05□□□□□ -1.76
APOBEC1P41238 AC096632.1-201ENST00000427395 310 ntBASIC4.05□□□□□ -1.76
APOBEC1P41238 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC4.05□□□□□ -1.76
APOBEC1P41238 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.05□□□□□ -1.76
APOBEC1P41238 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC4.05□□□□□ -1.76
APOBEC1P41238 AL133217.1-201ENST00000450980 425 ntBASIC4.05□□□□□ -1.76
APOBEC1P41238 DDX39BP2-208ENST00000453923 258 ntBASIC4.05□□□□□ -1.76
APOBEC1P41238 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC4.05□□□□□ -1.76
APOBEC1P41238 ANK3-207ENST00000460468 677 ntTSL 3 BASIC4.05□□□□□ -1.76
APOBEC1P41238 RPS29P22-201ENST00000472363 168 ntBASIC4.05□□□□□ -1.76
APOBEC1P41238 AC010301.1-201ENST00000473936 355 ntBASIC4.05□□□□□ -1.76
APOBEC1P41238 RPL23AP72-201ENST00000492447 435 ntBASIC4.05□□□□□ -1.76
APOBEC1P41238 SNX5P1-201ENST00000505757 1041 ntBASIC4.05□□□□□ -1.76
APOBEC1P41238 MTATP6P22-201ENST00000507369 598 ntBASIC4.05□□□□□ -1.76
APOBEC1P41238 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
APOBEC1P41238 AC018797.3-201ENST00000513388 1241 ntBASIC4.05□□□□□ -1.76
APOBEC1P41238 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.05□□□□□ -1.76
APOBEC1P41238 SNORD116-26-201ENST00000516006 96 ntBASIC4.05□□□□□ -1.76
APOBEC1P41238 RN7SKP92-201ENST00000517266 244 ntBASIC4.05□□□□□ -1.76
APOBEC1P41238 PTK2-220ENST00000520151 573 ntTSL 4 BASIC4.05□□□□□ -1.76
APOBEC1P41238 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.05□□□□□ -1.76
APOBEC1P41238 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.05□□□□□ -1.76
APOBEC1P41238 GSTP1P1-201ENST00000548078 319 ntBASIC4.05□□□□□ -1.76
APOBEC1P41238 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC4.05□□□□□ -1.76
APOBEC1P41238 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC4.05□□□□□ -1.76
APOBEC1P41238 AC090181.2-201ENST00000602975 672 ntBASIC4.05□□□□□ -1.76
APOBEC1P41238 HSPE1P14-201ENST00000605812 302 ntBASIC4.05□□□□□ -1.76
APOBEC1P41238 AC048344.4-201ENST00000619744 527 ntBASIC4.05□□□□□ -1.76
APOBEC1P41238 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.05□□□□□ -1.76
APOBEC1P41238 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
APOBEC1P41238 NEAT1-202ENST00000501122 22743 ntBASIC4.05□□□□□ -1.76
APOBEC1P41238 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.05□□□□□ -1.76
APOBEC1P41238 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
APOBEC1P41238 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
APOBEC1P41238 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.05□□□□□ -1.76
APOBEC1P41238 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
APOBEC1P41238 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.05□□□□□ -1.76
APOBEC1P41238 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.05□□□□□ -1.76
APOBEC1P41238 AC073429.2-201ENST00000569694 1444 ntBASIC4.04□□□□□ -1.76
APOBEC1P41238 ERCC6-202ENST00000374127 1782 ntBASIC4.04□□□□□ -1.76
APOBEC1P41238 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
APOBEC1P41238 LINC01109-201ENST00000603837 3081 ntBASIC4.04□□□□□ -1.76
APOBEC1P41238 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.04□□□□□ -1.76
APOBEC1P41238 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.04□□□□□ -1.76
APOBEC1P41238 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
APOBEC1P41238 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.04□□□□□ -1.76
APOBEC1P41238 RNU6-216P-201ENST00000363282 104 ntBASIC4.04□□□□□ -1.76
APOBEC1P41238 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC4.04□□□□□ -1.76
APOBEC1P41238 SNORD116-8-201ENST00000384365 95 ntBASIC4.04□□□□□ -1.76
APOBEC1P41238 MIR649-201ENST00000384843 97 ntBASIC4.04□□□□□ -1.76
APOBEC1P41238 MIR659-201ENST00000384963 97 ntBASIC4.04□□□□□ -1.76
APOBEC1P41238 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
APOBEC1P41238 RNA5SP146-201ENST00000410743 123 ntBASIC4.04□□□□□ -1.76
APOBEC1P41238 AC068533.2-201ENST00000411872 306 ntBASIC4.04□□□□□ -1.76
APOBEC1P41238 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms