Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC4.31□□□□□ -1.72
CTNNA1P35221 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
CTNNA1P35221 USP8P1-201ENST00000494673 3183 ntBASIC4.31□□□□□ -1.72
CTNNA1P35221 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
CTNNA1P35221 AL031985.3-201ENST00000565390 2449 ntBASIC4.31□□□□□ -1.72
CTNNA1P35221 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CTNNA1P35221 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.31□□□□□ -1.72
CTNNA1P35221 ZNF33BP1-201ENST00000452497 1834 ntBASIC4.3□□□□□ -1.72
CTNNA1P35221 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC4.3□□□□□ -1.72
CTNNA1P35221 RNU6-600P-201ENST00000362524 99 ntBASIC4.3□□□□□ -1.72
CTNNA1P35221 RNU1-132P-201ENST00000364300 164 ntBASIC4.3□□□□□ -1.72
CTNNA1P35221 RNU6-619P-201ENST00000365146 108 ntBASIC4.3□□□□□ -1.72
CTNNA1P35221 Y_RNA.493-201ENST00000384422 102 ntBASIC4.3□□□□□ -1.72
CTNNA1P35221 TMSB4XP8-201ENST00000402089 135 ntBASIC4.3□□□□□ -1.72
CTNNA1P35221 FAR2P2-201ENST00000413041 594 ntBASIC4.3□□□□□ -1.72
CTNNA1P35221 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC4.3□□□□□ -1.72
CTNNA1P35221 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC4.3□□□□□ -1.72
CTNNA1P35221 AC019070.1-201ENST00000415008 1024 ntBASIC4.3□□□□□ -1.72
CTNNA1P35221 TMSB4XP6-201ENST00000415187 135 ntBASIC4.3□□□□□ -1.72
CTNNA1P35221 TMSB4XP1-201ENST00000424567 135 ntBASIC4.3□□□□□ -1.72
CTNNA1P35221 USP12PY-201ENST00000427677 1064 ntBASIC4.3□□□□□ -1.72
CTNNA1P35221 AL138878.2-201ENST00000440581 1241 ntBASIC4.3□□□□□ -1.72
CTNNA1P35221 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC4.3□□□□□ -1.72
CTNNA1P35221 AC006011.1-201ENST00000442758 349 ntBASIC4.3□□□□□ -1.72
CTNNA1P35221 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.3□□□□□ -1.72
CTNNA1P35221 AL162151.2-201ENST00000448875 158 ntBASIC4.3□□□□□ -1.72
CTNNA1P35221 AC025674.1-201ENST00000507074 324 ntBASIC4.3□□□□□ -1.72
CTNNA1P35221 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC4.3□□□□□ -1.72
CTNNA1P35221 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC4.3□□□□□ -1.72
CTNNA1P35221 AP003385.6-201ENST00000531603 374 ntBASIC4.3□□□□□ -1.72
CTNNA1P35221 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC4.3□□□□□ -1.72
CTNNA1P35221 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC4.3□□□□□ -1.72
CTNNA1P35221 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CTNNA1P35221 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.3□□□□□ -1.72
CTNNA1P35221 RPL23AP87-202ENST00000573039 466 ntBASIC4.3□□□□□ -1.72
CTNNA1P35221 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC4.3□□□□□ -1.72
CTNNA1P35221 AC002487.1-201ENST00000604565 994 ntBASIC4.3□□□□□ -1.72
CTNNA1P35221 AL513477.2-201ENST00000607858 568 ntBASIC4.3□□□□□ -1.72
CTNNA1P35221 AL354760.1-201ENST00000608357 643 ntBASIC4.3□□□□□ -1.72
CTNNA1P35221 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.3□□□□□ -1.72
CTNNA1P35221 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
CTNNA1P35221 RN7SL722P-201ENST00000617780 284 ntBASIC4.3□□□□□ -1.72
CTNNA1P35221 RN7SL565P-201ENST00000618246 284 ntBASIC4.3□□□□□ -1.72
CTNNA1P35221 AC112200.1-201ENST00000625015 234 ntBASIC4.3□□□□□ -1.72
CTNNA1P35221 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.3□□□□□ -1.72
CTNNA1P35221 AL592494.2-201ENST00000425455 1548 ntBASIC4.3□□□□□ -1.72
CTNNA1P35221 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CTNNA1P35221 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CTNNA1P35221 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
CTNNA1P35221 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CTNNA1P35221 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
CTNNA1P35221 FAM91A3P-201ENST00000456826 2544 ntBASIC4.29□□□□□ -1.72
CTNNA1P35221 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
CTNNA1P35221 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
CTNNA1P35221 RNA5SP447-201ENST00000363749 119 ntBASIC4.29□□□□□ -1.72
CTNNA1P35221 RNU6-263P-201ENST00000363811 107 ntBASIC4.29□□□□□ -1.72
CTNNA1P35221 RNU6-353P-201ENST00000364266 108 ntBASIC4.29□□□□□ -1.72
CTNNA1P35221 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
CTNNA1P35221 MIR649-201ENST00000384843 97 ntBASIC4.29□□□□□ -1.72
CTNNA1P35221 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
CTNNA1P35221 HSPE1P26-201ENST00000405341 275 ntBASIC4.29□□□□□ -1.72
CTNNA1P35221 RN7SKP182-201ENST00000410772 298 ntBASIC4.29□□□□□ -1.72
CTNNA1P35221 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC4.29□□□□□ -1.72
CTNNA1P35221 OFD1P18Y-201ENST00000420889 959 ntBASIC4.29□□□□□ -1.72
CTNNA1P35221 RPS27AP7-201ENST00000422792 455 ntBASIC4.29□□□□□ -1.72
CTNNA1P35221 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC4.29□□□□□ -1.72
CTNNA1P35221 FO393414.1-201ENST00000428697 1184 ntBASIC4.29□□□□□ -1.72
CTNNA1P35221 IFNNP1-201ENST00000429219 553 ntBASIC4.29□□□□□ -1.72
CTNNA1P35221 B3GNT2P1-201ENST00000434960 952 ntBASIC4.29□□□□□ -1.72
CTNNA1P35221 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC4.29□□□□□ -1.72
CTNNA1P35221 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC4.29□□□□□ -1.72
CTNNA1P35221 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.29□□□□□ -1.72
CTNNA1P35221 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.29□□□□□ -1.72
CTNNA1P35221 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC4.29□□□□□ -1.72
CTNNA1P35221 AC231760.1-201ENST00000498002 260 ntBASIC4.29□□□□□ -1.72
CTNNA1P35221 AC093720.1-201ENST00000505681 714 ntBASIC4.29□□□□□ -1.72
CTNNA1P35221 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.29□□□□□ -1.72
CTNNA1P35221 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC4.29□□□□□ -1.72
CTNNA1P35221 AC010342.1-201ENST00000514047 877 ntBASIC4.29□□□□□ -1.72
CTNNA1P35221 MIR2114-201ENST00000516645 80 ntBASIC4.29□□□□□ -1.72
CTNNA1P35221 RNA5SP143-201ENST00000516936 115 ntBASIC4.29□□□□□ -1.72
CTNNA1P35221 AP004371.1-201ENST00000525240 214 ntBASIC4.29□□□□□ -1.72
CTNNA1P35221 OR4R2P-201ENST00000530815 597 ntBASIC4.29□□□□□ -1.72
CTNNA1P35221 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.29□□□□□ -1.72
CTNNA1P35221 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC4.29□□□□□ -1.72
CTNNA1P35221 AC022968.1-201ENST00000567372 442 ntBASIC4.29□□□□□ -1.72
CTNNA1P35221 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC4.29□□□□□ -1.72
CTNNA1P35221 MTATP6P2-201ENST00000603319 678 ntBASIC4.29□□□□□ -1.72
CTNNA1P35221 AC025588.3-201ENST00000604182 274 ntBASIC4.29□□□□□ -1.72
CTNNA1P35221 AL158211.2-201ENST00000607282 395 ntBASIC4.29□□□□□ -1.72
CTNNA1P35221 AC019193.2-201ENST00000610012 634 ntBASIC4.29□□□□□ -1.72
CTNNA1P35221 AC012531.5-201ENST00000611375 151 ntBASIC4.29□□□□□ -1.72
CTNNA1P35221 AC084824.5-201ENST00000612009 413 ntBASIC4.29□□□□□ -1.72
CTNNA1P35221 AL354976.1-201ENST00000613843 387 ntBASIC4.29□□□□□ -1.72
CTNNA1P35221 AC090246.1-201ENST00000616499 426 ntBASIC4.29□□□□□ -1.72
CTNNA1P35221 MIR7151-201ENST00000617477 60 ntBASIC4.29□□□□□ -1.72
CTNNA1P35221 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC4.29□□□□□ -1.72
CTNNA1P35221 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC4.29□□□□□ -1.72
CTNNA1P35221 BX649567.1-201ENST00000642071 1134 ntBASIC4.29□□□□□ -1.72
CTNNA1P35221 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms