Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC4.12□□□□□ -1.75
CHRNA3P32297 AC092451.2-201ENST00000538746 658 ntBASIC4.12□□□□□ -1.75
CHRNA3P32297 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC4.12□□□□□ -1.75
CHRNA3P32297 CR383656.14-201ENST00000551951 406 ntBASIC4.12□□□□□ -1.75
CHRNA3P32297 SERPINE4P-201ENST00000554978 281 ntBASIC4.12□□□□□ -1.75
CHRNA3P32297 CENPUP2-201ENST00000555897 1186 ntBASIC4.12□□□□□ -1.75
CHRNA3P32297 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC4.12□□□□□ -1.75
CHRNA3P32297 AL133457.1-201ENST00000564251 987 ntBASIC4.12□□□□□ -1.75
CHRNA3P32297 AC106734.1-201ENST00000568646 663 ntBASIC4.12□□□□□ -1.75
CHRNA3P32297 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CHRNA3P32297 AC022916.3-201ENST00000592961 742 ntBASIC4.12□□□□□ -1.75
CHRNA3P32297 AC144521.1-201ENST00000607148 956 ntBASIC4.12□□□□□ -1.75
CHRNA3P32297 AC099676.1-201ENST00000608886 657 ntBASIC4.12□□□□□ -1.75
CHRNA3P32297 AC092608.3-201ENST00000625017 386 ntBASIC4.12□□□□□ -1.75
CHRNA3P32297 AC097372.4-201ENST00000625025 466 ntBASIC4.12□□□□□ -1.75
CHRNA3P32297 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CHRNA3P32297 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.12□□□□□ -1.75
CHRNA3P32297 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CHRNA3P32297 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
CHRNA3P32297 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CHRNA3P32297 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
CHRNA3P32297 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CHRNA3P32297 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
CHRNA3P32297 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CHRNA3P32297 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC4.11□□□□□ -1.75
CHRNA3P32297 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CHRNA3P32297 RNU6-1339P-201ENST00000363574 91 ntBASIC4.11□□□□□ -1.75
CHRNA3P32297 RNU6-650P-201ENST00000365658 111 ntBASIC4.11□□□□□ -1.75
CHRNA3P32297 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC4.11□□□□□ -1.75
CHRNA3P32297 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.11□□□□□ -1.75
CHRNA3P32297 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.11□□□□□ -1.75
CHRNA3P32297 RNU6-1005P-201ENST00000384519 107 ntBASIC4.11□□□□□ -1.75
CHRNA3P32297 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.11□□□□□ -1.75
CHRNA3P32297 HIGD1AP4-201ENST00000430194 280 ntBASIC4.11□□□□□ -1.75
CHRNA3P32297 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.11□□□□□ -1.75
CHRNA3P32297 RPL17P35-201ENST00000432217 549 ntBASIC4.11□□□□□ -1.75
CHRNA3P32297 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC4.11□□□□□ -1.75
CHRNA3P32297 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.11□□□□□ -1.75
CHRNA3P32297 RPS17P13-201ENST00000448974 407 ntBASIC4.11□□□□□ -1.75
CHRNA3P32297 MTCO3P20-201ENST00000454926 688 ntBASIC4.11□□□□□ -1.75
CHRNA3P32297 DNAJC19P1-201ENST00000455312 319 ntBASIC4.11□□□□□ -1.75
CHRNA3P32297 AC146507.1-201ENST00000468335 354 ntBASIC4.11□□□□□ -1.75
CHRNA3P32297 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC4.11□□□□□ -1.75
CHRNA3P32297 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC4.11□□□□□ -1.75
CHRNA3P32297 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.11□□□□□ -1.75
CHRNA3P32297 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC4.11□□□□□ -1.75
CHRNA3P32297 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CHRNA3P32297 OSBPL9P3-201ENST00000534523 595 ntBASIC4.11□□□□□ -1.75
CHRNA3P32297 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC4.11□□□□□ -1.75
CHRNA3P32297 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.11□□□□□ -1.75
CHRNA3P32297 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.11□□□□□ -1.75
CHRNA3P32297 AC104229.1-201ENST00000561364 255 ntBASIC4.11□□□□□ -1.75
CHRNA3P32297 ATP5F1P7-201ENST00000567330 760 ntBASIC4.11□□□□□ -1.75
CHRNA3P32297 AC053481.4-201ENST00000583164 216 ntBASIC4.11□□□□□ -1.75
CHRNA3P32297 AC015911.5-201ENST00000587076 451 ntBASIC4.11□□□□□ -1.75
CHRNA3P32297 AC093227.2-201ENST00000589357 285 ntBASIC4.11□□□□□ -1.75
CHRNA3P32297 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.11□□□□□ -1.75
CHRNA3P32297 AL390816.3-201ENST00000604527 1066 ntBASIC4.11□□□□□ -1.75
CHRNA3P32297 AL109618.2-201ENST00000605527 211 ntBASIC4.11□□□□□ -1.75
CHRNA3P32297 AC016542.1-201ENST00000608259 493 ntBASIC4.11□□□□□ -1.75
CHRNA3P32297 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.11□□□□□ -1.75
CHRNA3P32297 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC4.11□□□□□ -1.75
CHRNA3P32297 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CHRNA3P32297 DCAF13P1-201ENST00000495256 1330 ntBASIC4.11□□□□□ -1.75
CHRNA3P32297 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.11□□□□□ -1.75
CHRNA3P32297 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CHRNA3P32297 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
CHRNA3P32297 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CHRNA3P32297 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.1□□□□□ -1.75
CHRNA3P32297 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CHRNA3P32297 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
CHRNA3P32297 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.1□□□□□ -1.75
CHRNA3P32297 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
CHRNA3P32297 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.1□□□□□ -1.75
CHRNA3P32297 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CHRNA3P32297 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CHRNA3P32297 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CHRNA3P32297 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CHRNA3P32297 RNU6-356P-201ENST00000384140 107 ntBASIC4.1□□□□□ -1.75
CHRNA3P32297 ATP5F1P4-201ENST00000397288 746 ntBASIC4.1□□□□□ -1.75
CHRNA3P32297 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC4.1□□□□□ -1.75
CHRNA3P32297 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.1□□□□□ -1.75
CHRNA3P32297 AL691449.1-201ENST00000426570 421 ntBASIC4.1□□□□□ -1.75
CHRNA3P32297 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.1□□□□□ -1.75
CHRNA3P32297 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC4.1□□□□□ -1.75
CHRNA3P32297 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC4.1□□□□□ -1.75
CHRNA3P32297 AC007537.2-201ENST00000472093 511 ntBASIC4.1□□□□□ -1.75
CHRNA3P32297 AC073522.1-201ENST00000483312 377 ntBASIC4.1□□□□□ -1.75
CHRNA3P32297 AC110792.1-201ENST00000491826 472 ntBASIC4.1□□□□□ -1.75
CHRNA3P32297 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC4.1□□□□□ -1.75
CHRNA3P32297 AC010460.1-201ENST00000507087 466 ntBASIC4.1□□□□□ -1.75
CHRNA3P32297 AC008885.2-201ENST00000509506 930 ntBASIC4.1□□□□□ -1.75
CHRNA3P32297 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC4.1□□□□□ -1.75
CHRNA3P32297 RFESD-208ENST00000513950 464 ntTSL 5 BASIC4.1□□□□□ -1.75
CHRNA3P32297 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4.1□□□□□ -1.75
CHRNA3P32297 IGLVIV-53-201ENST00000520107 367 ntBASIC4.1□□□□□ -1.75
CHRNA3P32297 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.1□□□□□ -1.75
CHRNA3P32297 AC019227.1-201ENST00000526902 510 ntBASIC4.1□□□□□ -1.75
CHRNA3P32297 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC4.1□□□□□ -1.75
CHRNA3P32297 AC092747.2-201ENST00000545069 983 ntBASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms