Protein–RNA interactions for Protein: P28358

HOXD10, Homeobox protein Hox-D10, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD10P28358 LLPHP1-201ENST00000603571 367 ntBASIC4.31□□□□□ -1.72
HOXD10P28358 AC079880.2-201ENST00000603790 1213 ntBASIC4.31□□□□□ -1.72
HOXD10P28358 AL391834.1-201ENST00000609609 560 ntBASIC4.31□□□□□ -1.72
HOXD10P28358 AC119674.1-212ENST00000641155 993 ntBASIC4.31□□□□□ -1.72
HOXD10P28358 AL365440.1-201ENST00000436135 2167 ntBASIC4.31□□□□□ -1.72
HOXD10P28358 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.31□□□□□ -1.72
HOXD10P28358 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.31□□□□□ -1.72
HOXD10P28358 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
HOXD10P28358 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
HOXD10P28358 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
HOXD10P28358 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
HOXD10P28358 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
HOXD10P28358 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.3□□□□□ -1.72
HOXD10P28358 RHOT1P2-201ENST00000366423 333 ntBASIC4.3□□□□□ -1.72
HOXD10P28358 HDGFP1-201ENST00000405943 252 ntBASIC4.3□□□□□ -1.72
HOXD10P28358 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
HOXD10P28358 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.3□□□□□ -1.72
HOXD10P28358 Z99127.2-201ENST00000441426 334 ntBASIC4.3□□□□□ -1.72
HOXD10P28358 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC4.3□□□□□ -1.72
HOXD10P28358 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC4.3□□□□□ -1.72
HOXD10P28358 UBDP1-202ENST00000457888 382 ntBASIC4.3□□□□□ -1.72
HOXD10P28358 RPL21P103-201ENST00000479921 488 ntBASIC4.3□□□□□ -1.72
HOXD10P28358 AC092451.1-201ENST00000480211 153 ntBASIC4.3□□□□□ -1.72
HOXD10P28358 AL049873.1-201ENST00000480540 376 ntBASIC4.3□□□□□ -1.72
HOXD10P28358 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC4.3□□□□□ -1.72
HOXD10P28358 OR5H4P-201ENST00000510851 923 ntBASIC4.3□□□□□ -1.72
HOXD10P28358 RN7SKP289-201ENST00000517244 295 ntBASIC4.3□□□□□ -1.72
HOXD10P28358 AC067904.2-201ENST00000517322 1283 ntBASIC4.3□□□□□ -1.72
HOXD10P28358 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC4.3□□□□□ -1.72
HOXD10P28358 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC4.3□□□□□ -1.72
HOXD10P28358 AC103843.2-201ENST00000530523 682 ntBASIC4.3□□□□□ -1.72
HOXD10P28358 AP004242.1-201ENST00000533701 349 ntBASIC4.3□□□□□ -1.72
HOXD10P28358 AC024224.1-201ENST00000538284 609 ntBASIC4.3□□□□□ -1.72
HOXD10P28358 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC4.3□□□□□ -1.72
HOXD10P28358 NACA-211ENST00000548563 827 ntTSL 5 BASIC4.3□□□□□ -1.72
HOXD10P28358 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.3□□□□□ -1.72
HOXD10P28358 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC4.3□□□□□ -1.72
HOXD10P28358 AC092868.3-201ENST00000560515 784 ntBASIC4.3□□□□□ -1.72
HOXD10P28358 AC015911.5-201ENST00000587076 451 ntBASIC4.3□□□□□ -1.72
HOXD10P28358 HMGB1P51-201ENST00000605166 638 ntBASIC4.3□□□□□ -1.72
HOXD10P28358 AL513477.2-201ENST00000607858 568 ntBASIC4.3□□□□□ -1.72
HOXD10P28358 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC4.3□□□□□ -1.72
HOXD10P28358 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC4.3□□□□□ -1.72
HOXD10P28358 AL359715.5-201ENST00000623431 443 ntBASIC4.3□□□□□ -1.72
HOXD10P28358 CR392039.4-201ENST00000624968 501 ntBASIC4.3□□□□□ -1.72
HOXD10P28358 RNF6P1-201ENST00000444889 1784 ntBASIC4.3□□□□□ -1.72
HOXD10P28358 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.3□□□□□ -1.72
HOXD10P28358 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
HOXD10P28358 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC4.29□□□□□ -1.72
HOXD10P28358 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
HOXD10P28358 AC067945.1-201ENST00000342609 618 ntBASIC4.29□□□□□ -1.72
HOXD10P28358 RNA5SP52-201ENST00000362448 134 ntBASIC4.29□□□□□ -1.72
HOXD10P28358 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
HOXD10P28358 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
HOXD10P28358 Y_RNA.500-201ENST00000384466 111 ntBASIC4.29□□□□□ -1.72
HOXD10P28358 MIR128-1-201ENST00000384921 82 ntBASIC4.29□□□□□ -1.72
HOXD10P28358 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC4.29□□□□□ -1.72
HOXD10P28358 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.29□□□□□ -1.72
HOXD10P28358 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC4.29□□□□□ -1.72
HOXD10P28358 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.29□□□□□ -1.72
HOXD10P28358 AL353898.1-201ENST00000444055 238 ntBASIC4.29□□□□□ -1.72
HOXD10P28358 AP001486.1-201ENST00000463339 476 ntBASIC4.29□□□□□ -1.72
HOXD10P28358 AP000563.1-201ENST00000490865 758 ntBASIC4.29□□□□□ -1.72
HOXD10P28358 AC108941.1-201ENST00000502853 530 ntBASIC4.29□□□□□ -1.72
HOXD10P28358 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC4.29□□□□□ -1.72
HOXD10P28358 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC4.29□□□□□ -1.72
HOXD10P28358 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC4.29□□□□□ -1.72
HOXD10P28358 SLC25A36P1-201ENST00000590111 465 ntBASIC4.29□□□□□ -1.72
HOXD10P28358 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC4.29□□□□□ -1.72
HOXD10P28358 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.29□□□□□ -1.72
HOXD10P28358 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC4.29□□□□□ -1.72
HOXD10P28358 ATE1-AS1-202ENST00000636460 506 ntBASIC4.29□□□□□ -1.72
HOXD10P28358 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.29□□□□□ -1.72
HOXD10P28358 AL592494.2-201ENST00000425455 1548 ntBASIC4.29□□□□□ -1.72
HOXD10P28358 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
HOXD10P28358 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
HOXD10P28358 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
HOXD10P28358 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
HOXD10P28358 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
HOXD10P28358 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
HOXD10P28358 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
HOXD10P28358 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
HOXD10P28358 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
HOXD10P28358 GNG5P1-201ENST00000255500 204 ntBASIC4.28□□□□□ -1.72
HOXD10P28358 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC4.28□□□□□ -1.72
HOXD10P28358 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC4.28□□□□□ -1.72
HOXD10P28358 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
HOXD10P28358 MIR7-1-201ENST00000384871 110 ntBASIC4.28□□□□□ -1.72
HOXD10P28358 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC4.28□□□□□ -1.72
HOXD10P28358 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.28□□□□□ -1.72
HOXD10P28358 AC236972.1-201ENST00000433225 199 ntBASIC4.28□□□□□ -1.72
HOXD10P28358 AL138799.3-201ENST00000438968 350 ntBASIC4.28□□□□□ -1.72
HOXD10P28358 DCLRE1CP1-201ENST00000454630 470 ntBASIC4.28□□□□□ -1.72
HOXD10P28358 CFTRP1-201ENST00000456646 183 ntBASIC4.28□□□□□ -1.72
HOXD10P28358 AC078785.3-201ENST00000476607 425 ntBASIC4.28□□□□□ -1.72
HOXD10P28358 SYT14P1-201ENST00000481459 721 ntBASIC4.28□□□□□ -1.72
HOXD10P28358 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC4.28□□□□□ -1.72
HOXD10P28358 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC4.28□□□□□ -1.72
HOXD10P28358 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC4.28□□□□□ -1.72
HOXD10P28358 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 10.9 ms