Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
RFX1P22670 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
RFX1P22670 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC6.59□□□□□ -1.35
RFX1P22670 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
RFX1P22670 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.35
RFX1P22670 RNA5SP242-201ENST00000364171 118 ntBASIC6.59□□□□□ -1.35
RFX1P22670 GNG5P2-201ENST00000372054 207 ntBASIC6.59□□□□□ -1.35
RFX1P22670 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
RFX1P22670 RNU2-62P-201ENST00000410868 191 ntBASIC6.59□□□□□ -1.35
RFX1P22670 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC6.59□□□□□ -1.35
RFX1P22670 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC6.59□□□□□ -1.35
RFX1P22670 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC6.59□□□□□ -1.35
RFX1P22670 MTND6P12-201ENST00000428247 522 ntBASIC6.59□□□□□ -1.35
RFX1P22670 RPL23AP30-201ENST00000432419 501 ntBASIC6.59□□□□□ -1.35
RFX1P22670 TAAR7P-201ENST00000436141 242 ntBASIC6.59□□□□□ -1.35
RFX1P22670 AC012075.1-201ENST00000436549 580 ntBASIC6.59□□□□□ -1.35
RFX1P22670 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC6.59□□□□□ -1.35
RFX1P22670 AC140076.1-201ENST00000449897 361 ntBASIC6.59□□□□□ -1.35
RFX1P22670 AL162739.1-201ENST00000450606 307 ntBASIC6.59□□□□□ -1.35
RFX1P22670 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC6.59□□□□□ -1.35
RFX1P22670 AC010683.1-201ENST00000473673 378 ntBASIC6.59□□□□□ -1.35
RFX1P22670 AC108693.1-201ENST00000496068 432 ntBASIC6.59□□□□□ -1.35
RFX1P22670 RPL38P4-201ENST00000502376 214 ntBASIC6.59□□□□□ -1.35
RFX1P22670 AC110792.2-201ENST00000510278 224 ntBASIC6.59□□□□□ -1.35
RFX1P22670 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC6.59□□□□□ -1.35
RFX1P22670 AC016065.2-201ENST00000514530 444 ntBASIC6.59□□□□□ -1.35
RFX1P22670 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC6.59□□□□□ -1.35
RFX1P22670 IGLV2-28-201ENST00000520681 304 ntBASIC6.59□□□□□ -1.35
RFX1P22670 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
RFX1P22670 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC6.59□□□□□ -1.35
RFX1P22670 OR5B19P-201ENST00000531766 928 ntBASIC6.59□□□□□ -1.35
RFX1P22670 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC6.59□□□□□ -1.35
RFX1P22670 AC090022.1-201ENST00000546569 311 ntBASIC6.59□□□□□ -1.35
RFX1P22670 SMARCE1P3-201ENST00000553649 1231 ntBASIC6.59□□□□□ -1.35
RFX1P22670 AC007956.1-201ENST00000555623 542 ntBASIC6.59□□□□□ -1.35
RFX1P22670 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC6.59□□□□□ -1.35
RFX1P22670 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC6.59□□□□□ -1.35
RFX1P22670 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC6.59□□□□□ -1.35
RFX1P22670 RNU4ATAC-201ENST00000580972 127 ntBASIC6.59□□□□□ -1.35
RFX1P22670 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC6.59□□□□□ -1.35
RFX1P22670 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC6.59□□□□□ -1.35
RFX1P22670 AL132765.2-201ENST00000610812 351 ntBASIC6.59□□□□□ -1.35
RFX1P22670 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC6.59□□□□□ -1.35
RFX1P22670 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC6.59□□□□□ -1.35
RFX1P22670 MVP-219ENST00000629059 120 ntTSL 5 BASIC6.59□□□□□ -1.35
RFX1P22670 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
RFX1P22670 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
RFX1P22670 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
RFX1P22670 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC6.59□□□□□ -1.35
RFX1P22670 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
RFX1P22670 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
RFX1P22670 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC6.59□□□□□ -1.35
RFX1P22670 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
RFX1P22670 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
RFX1P22670 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC6.59□□□□□ -1.35
RFX1P22670 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
RFX1P22670 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC6.59□□□□□ -1.36
RFX1P22670 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
RFX1P22670 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC6.59□□□□□ -1.36
RFX1P22670 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.36
RFX1P22670 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC6.59□□□□□ -1.36
RFX1P22670 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC6.58□□□□□ -1.36
RFX1P22670 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC6.58□□□□□ -1.36
RFX1P22670 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC6.58□□□□□ -1.36
RFX1P22670 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
RFX1P22670 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC6.58□□□□□ -1.36
RFX1P22670 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC6.58□□□□□ -1.36
RFX1P22670 AC006020.1-201ENST00000420179 1854 ntBASIC6.58□□□□□ -1.36
RFX1P22670 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
RFX1P22670 AC005725.1-201ENST00000577346 2607 ntBASIC6.58□□□□□ -1.36
RFX1P22670 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
RFX1P22670 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC6.58□□□□□ -1.36
RFX1P22670 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
RFX1P22670 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
RFX1P22670 RPL7P26-201ENST00000333817 754 ntBASIC6.58□□□□□ -1.36
RFX1P22670 RNU4-79P-201ENST00000362764 141 ntBASIC6.58□□□□□ -1.36
RFX1P22670 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC6.58□□□□□ -1.36
RFX1P22670 AL356432.1-201ENST00000405809 419 ntBASIC6.58□□□□□ -1.36
RFX1P22670 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC6.58□□□□□ -1.36
RFX1P22670 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC6.58□□□□□ -1.36
RFX1P22670 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
RFX1P22670 AC104651.2-201ENST00000447549 528 ntBASIC6.58□□□□□ -1.36
RFX1P22670 EIF4A1P6-201ENST00000448133 1210 ntBASIC6.58□□□□□ -1.36
RFX1P22670 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC6.58□□□□□ -1.36
RFX1P22670 PPIAP7-201ENST00000454070 489 ntBASIC6.58□□□□□ -1.36
RFX1P22670 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC6.58□□□□□ -1.36
RFX1P22670 RNU7-63P-201ENST00000459054 62 ntBASIC6.58□□□□□ -1.36
RFX1P22670 RN7SL717P-201ENST00000478343 297 ntBASIC6.58□□□□□ -1.36
RFX1P22670 RPS3AP50-201ENST00000487064 803 ntBASIC6.58□□□□□ -1.36
RFX1P22670 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC6.58□□□□□ -1.36
RFX1P22670 HMGN1P13-201ENST00000505795 138 ntBASIC6.58□□□□□ -1.36
RFX1P22670 SCARNA24.1-201ENST00000516465 137 ntBASIC6.58□□□□□ -1.36
RFX1P22670 WBP1LP3-201ENST00000523033 208 ntBASIC6.58□□□□□ -1.36
RFX1P22670 AP000620.1-201ENST00000527147 504 ntBASIC6.58□□□□□ -1.36
RFX1P22670 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC6.58□□□□□ -1.36
RFX1P22670 AC243972.3-201ENST00000539655 198 ntBASIC6.58□□□□□ -1.36
RFX1P22670 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
RFX1P22670 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC6.58□□□□□ -1.36
RFX1P22670 AC063949.1-201ENST00000552900 865 ntBASIC6.58□□□□□ -1.36
RFX1P22670 AL442663.2-201ENST00000554385 511 ntBASIC6.58□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms