Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.13□□□□□ -1.75
CHRNA1P02708 RPL31P61-201ENST00000496160 376 ntBASIC4.13□□□□□ -1.75
CHRNA1P02708 AC068305.1-201ENST00000497406 726 ntBASIC4.13□□□□□ -1.75
CHRNA1P02708 AC108941.1-201ENST00000502853 530 ntBASIC4.13□□□□□ -1.75
CHRNA1P02708 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
CHRNA1P02708 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC4.13□□□□□ -1.75
CHRNA1P02708 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC4.13□□□□□ -1.75
CHRNA1P02708 OR5B10P-201ENST00000532869 642 ntBASIC4.13□□□□□ -1.75
CHRNA1P02708 UBTFL9-201ENST00000534504 1148 ntBASIC4.13□□□□□ -1.75
CHRNA1P02708 AC006960.3-201ENST00000561845 705 ntBASIC4.13□□□□□ -1.75
CHRNA1P02708 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC4.13□□□□□ -1.75
CHRNA1P02708 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC4.13□□□□□ -1.75
CHRNA1P02708 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC4.13□□□□□ -1.75
CHRNA1P02708 AC115085.1-201ENST00000588924 229 ntBASIC4.13□□□□□ -1.75
CHRNA1P02708 AC018618.2-201ENST00000604770 446 ntBASIC4.13□□□□□ -1.75
CHRNA1P02708 AL354760.1-201ENST00000608357 643 ntBASIC4.13□□□□□ -1.75
CHRNA1P02708 AC004943.3-201ENST00000624116 600 ntBASIC4.13□□□□□ -1.75
CHRNA1P02708 HPVC1-201ENST00000629899 1198 ntBASIC4.13□□□□□ -1.75
CHRNA1P02708 AL163152.1-201ENST00000642001 374 ntBASIC4.13□□□□□ -1.75
CHRNA1P02708 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CHRNA1P02708 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CHRNA1P02708 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CHRNA1P02708 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC4.13□□□□□ -1.75
CHRNA1P02708 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.13□□□□□ -1.75
CHRNA1P02708 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CHRNA1P02708 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.12□□□□□ -1.75
CHRNA1P02708 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.12□□□□□ -1.75
CHRNA1P02708 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CHRNA1P02708 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CHRNA1P02708 MTCO1P12-201ENST00000414273 1543 ntBASIC4.12□□□□□ -1.75
CHRNA1P02708 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CHRNA1P02708 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
CHRNA1P02708 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CHRNA1P02708 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.12□□□□□ -1.75
CHRNA1P02708 MIR1183-201ENST00000408856 89 ntBASIC4.12□□□□□ -1.75
CHRNA1P02708 TATDN1P1-201ENST00000414123 891 ntBASIC4.12□□□□□ -1.75
CHRNA1P02708 AC245052.5-201ENST00000416320 649 ntBASIC4.12□□□□□ -1.75
CHRNA1P02708 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC4.12□□□□□ -1.75
CHRNA1P02708 KCTD9P3-201ENST00000434597 1169 ntBASIC4.12□□□□□ -1.75
CHRNA1P02708 RPS3AP46-201ENST00000448352 682 ntBASIC4.12□□□□□ -1.75
CHRNA1P02708 PPIAP3-201ENST00000450588 505 ntBASIC4.12□□□□□ -1.75
CHRNA1P02708 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.12□□□□□ -1.75
CHRNA1P02708 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CHRNA1P02708 AC074250.1-201ENST00000511117 192 ntBASIC4.12□□□□□ -1.75
CHRNA1P02708 RNA5SP309-201ENST00000516670 106 ntBASIC4.12□□□□□ -1.75
CHRNA1P02708 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC4.12□□□□□ -1.75
CHRNA1P02708 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CHRNA1P02708 AC025260.1-201ENST00000548858 430 ntBASIC4.12□□□□□ -1.75
CHRNA1P02708 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC4.12□□□□□ -1.75
CHRNA1P02708 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.12□□□□□ -1.75
CHRNA1P02708 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC4.12□□□□□ -1.75
CHRNA1P02708 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC4.12□□□□□ -1.75
CHRNA1P02708 LINC00557-201ENST00000563184 1279 ntBASIC4.12□□□□□ -1.75
CHRNA1P02708 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC4.12□□□□□ -1.75
CHRNA1P02708 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.12□□□□□ -1.75
CHRNA1P02708 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC4.12□□□□□ -1.75
CHRNA1P02708 AC079610.2-201ENST00000604818 690 ntBASIC4.12□□□□□ -1.75
CHRNA1P02708 AC135178.6-201ENST00000605314 398 ntBASIC4.12□□□□□ -1.75
CHRNA1P02708 AL159169.3-201ENST00000608871 561 ntBASIC4.12□□□□□ -1.75
CHRNA1P02708 MIR7975-201ENST00000619350 68 ntBASIC4.12□□□□□ -1.75
CHRNA1P02708 AC233309.1-201ENST00000619522 751 ntBASIC4.12□□□□□ -1.75
CHRNA1P02708 AC091948.2-201ENST00000636510 279 ntBASIC4.12□□□□□ -1.75
CHRNA1P02708 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.12□□□□□ -1.75
CHRNA1P02708 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CHRNA1P02708 AC138393.1-206ENST00000540997 1886 ntBASIC4.11□□□□□ -1.75
CHRNA1P02708 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.11□□□□□ -1.75
CHRNA1P02708 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC4.11□□□□□ -1.75
CHRNA1P02708 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC4.11□□□□□ -1.75
CHRNA1P02708 JKAMPP1-201ENST00000413804 919 ntBASIC4.11□□□□□ -1.75
CHRNA1P02708 XKRYP4-201ENST00000414395 483 ntBASIC4.11□□□□□ -1.75
CHRNA1P02708 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.11□□□□□ -1.75
CHRNA1P02708 TPTE2P6-202ENST00000445572 1007 ntBASIC4.11□□□□□ -1.75
CHRNA1P02708 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
CHRNA1P02708 XKRYP5-201ENST00000449659 483 ntBASIC4.11□□□□□ -1.75
CHRNA1P02708 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC4.11□□□□□ -1.75
CHRNA1P02708 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC4.11□□□□□ -1.75
CHRNA1P02708 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.11□□□□□ -1.75
CHRNA1P02708 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC4.11□□□□□ -1.75
CHRNA1P02708 RN7SKP13-201ENST00000515933 244 ntBASIC4.11□□□□□ -1.75
CHRNA1P02708 SNORA70.14-201ENST00000516205 110 ntBASIC4.11□□□□□ -1.75
CHRNA1P02708 AC103833.1-201ENST00000517442 172 ntBASIC4.11□□□□□ -1.75
CHRNA1P02708 IGKV2-36-201ENST00000519999 223 ntBASIC4.11□□□□□ -1.75
CHRNA1P02708 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC4.11□□□□□ -1.75
CHRNA1P02708 AC106785.3-201ENST00000564064 847 ntBASIC4.11□□□□□ -1.75
CHRNA1P02708 AC009101.1-201ENST00000568135 242 ntBASIC4.11□□□□□ -1.75
CHRNA1P02708 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC4.11□□□□□ -1.75
CHRNA1P02708 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC4.11□□□□□ -1.75
CHRNA1P02708 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC4.11□□□□□ -1.75
CHRNA1P02708 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC4.11□□□□□ -1.75
CHRNA1P02708 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC4.11□□□□□ -1.75
CHRNA1P02708 AC103858.2-201ENST00000621471 543 ntBASIC4.11□□□□□ -1.75
CHRNA1P02708 AC091953.5-201ENST00000622919 233 ntBASIC4.11□□□□□ -1.75
CHRNA1P02708 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
CHRNA1P02708 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
CHRNA1P02708 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.11□□□□□ -1.75
CHRNA1P02708 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CHRNA1P02708 AL353743.4-201ENST00000422653 1547 ntBASIC4.11□□□□□ -1.75
CHRNA1P02708 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CHRNA1P02708 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CHRNA1P02708 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms