Protein–RNA interactions for Protein: O43395

PRPF3, U4/U6 small nuclear ribonucleoprotein Prp3, humanhuman

Known RBP Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3O43395 AC090312.1-201ENST00000580637 348 ntBASIC5.27□□□□□ -1.57
PRPF3O43395 HMGB2P1-201ENST00000591146 634 ntBASIC5.27□□□□□ -1.57
PRPF3O43395 AC103881.1-201ENST00000603476 538 ntBASIC5.27□□□□□ -1.57
PRPF3O43395 AC087283.1-201ENST00000604029 1074 ntBASIC5.27□□□□□ -1.57
PRPF3O43395 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC5.27□□□□□ -1.57
PRPF3O43395 AP001521.1-201ENST00000609150 300 ntBASIC5.27□□□□□ -1.57
PRPF3O43395 AC078899.5-201ENST00000612475 178 ntBASIC5.27□□□□□ -1.57
PRPF3O43395 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC5.27□□□□□ -1.57
PRPF3O43395 AP000843.1-201ENST00000624880 701 ntBASIC5.27□□□□□ -1.57
PRPF3O43395 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC5.27□□□□□ -1.57
PRPF3O43395 AL596275.2-204ENST00000641628 552 ntBASIC5.27□□□□□ -1.57
PRPF3O43395 AL596275.2-206ENST00000641957 626 ntBASIC5.27□□□□□ -1.57
PRPF3O43395 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PRPF3O43395 CPHL1P-201ENST00000461341 3407 ntBASIC5.27□□□□□ -1.57
PRPF3O43395 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
PRPF3O43395 AC009951.1-201ENST00000623674 2614 ntBASIC5.27□□□□□ -1.57
PRPF3O43395 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
PRPF3O43395 OR51H2P-202ENST00000641424 3046 ntBASIC5.26□□□□□ -1.57
PRPF3O43395 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC5.26□□□□□ -1.57
PRPF3O43395 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC5.26□□□□□ -1.57
PRPF3O43395 AL672167.1-203ENST00000641299 2975 ntBASIC5.26□□□□□ -1.57
PRPF3O43395 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC5.26□□□□□ -1.57
PRPF3O43395 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC5.26□□□□□ -1.57
PRPF3O43395 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
PRPF3O43395 LINC00622-201ENST00000562811 1570 ntBASIC5.26□□□□□ -1.57
PRPF3O43395 LYST-202ENST00000389794 12985 ntTSL 5 BASIC5.26□□□□□ -1.57
PRPF3O43395 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
PRPF3O43395 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PRPF3O43395 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
PRPF3O43395 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
PRPF3O43395 RNU4-72P-201ENST00000410754 173 ntBASIC5.26□□□□□ -1.57
PRPF3O43395 RPS15AP40-201ENST00000419621 391 ntBASIC5.26□□□□□ -1.57
PRPF3O43395 RPL36P19-201ENST00000430744 301 ntBASIC5.26□□□□□ -1.57
PRPF3O43395 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC5.26□□□□□ -1.57
PRPF3O43395 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC5.26□□□□□ -1.57
PRPF3O43395 AC092427.1-201ENST00000439177 601 ntBASIC5.26□□□□□ -1.57
PRPF3O43395 RPL23AP93-201ENST00000440847 484 ntBASIC5.26□□□□□ -1.57
PRPF3O43395 AL606662.1-201ENST00000445763 553 ntBASIC5.26□□□□□ -1.57
PRPF3O43395 RPL7P31-201ENST00000450192 724 ntBASIC5.26□□□□□ -1.57
PRPF3O43395 AL133217.1-201ENST00000450980 425 ntBASIC5.26□□□□□ -1.57
PRPF3O43395 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC5.26□□□□□ -1.57
PRPF3O43395 RN7SL354P-201ENST00000469282 294 ntBASIC5.26□□□□□ -1.57
PRPF3O43395 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC5.26□□□□□ -1.57
PRPF3O43395 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC5.26□□□□□ -1.57
PRPF3O43395 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC5.26□□□□□ -1.57
PRPF3O43395 PGBD4P4-201ENST00000509673 613 ntBASIC5.26□□□□□ -1.57
PRPF3O43395 ATP1B1P1-201ENST00000509767 915 ntBASIC5.26□□□□□ -1.57
PRPF3O43395 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC5.26□□□□□ -1.57
PRPF3O43395 RNU6-678P-201ENST00000516832 109 ntBASIC5.26□□□□□ -1.57
PRPF3O43395 NAP1L1P1-201ENST00000524793 1063 ntBASIC5.26□□□□□ -1.57
PRPF3O43395 OR4A45P-201ENST00000529954 901 ntBASIC5.26□□□□□ -1.57
PRPF3O43395 AC008127.2-201ENST00000549925 1075 ntBASIC5.26□□□□□ -1.57
PRPF3O43395 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC5.26□□□□□ -1.57
PRPF3O43395 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC5.26□□□□□ -1.57
PRPF3O43395 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC5.26□□□□□ -1.57
PRPF3O43395 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC5.26□□□□□ -1.57
PRPF3O43395 SNORD39.3-201ENST00000584451 71 ntBASIC5.26□□□□□ -1.57
PRPF3O43395 AC091178.1-203ENST00000584586 279 ntBASIC5.26□□□□□ -1.57
PRPF3O43395 AC067852.4-201ENST00000590314 478 ntBASIC5.26□□□□□ -1.57
PRPF3O43395 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
PRPF3O43395 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC5.26□□□□□ -1.57
PRPF3O43395 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
PRPF3O43395 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
PRPF3O43395 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PRPF3O43395 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
PRPF3O43395 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
PRPF3O43395 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.26□□□□□ -1.57
PRPF3O43395 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
PRPF3O43395 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
PRPF3O43395 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
PRPF3O43395 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
PRPF3O43395 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
PRPF3O43395 OR5BR1P-201ENST00000524992 1330 ntBASIC5.25□□□□□ -1.57
PRPF3O43395 EEF1A1P42-201ENST00000613436 1331 ntBASIC5.25□□□□□ -1.57
PRPF3O43395 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC5.25□□□□□ -1.57
PRPF3O43395 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC5.25□□□□□ -1.57
PRPF3O43395 OR5H2-201ENST00000355273 945 ntBASIC5.25□□□□□ -1.57
PRPF3O43395 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
PRPF3O43395 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
PRPF3O43395 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
PRPF3O43395 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
PRPF3O43395 AC019155.1-201ENST00000382242 574 ntBASIC5.25□□□□□ -1.57
PRPF3O43395 SNORD96B-201ENST00000386148 79 ntBASIC5.25□□□□□ -1.57
PRPF3O43395 CYB5AP4-201ENST00000396692 399 ntBASIC5.25□□□□□ -1.57
PRPF3O43395 AL590084.2-201ENST00000401481 382 ntBASIC5.25□□□□□ -1.57
PRPF3O43395 RPS16P5-201ENST00000406501 404 ntBASIC5.25□□□□□ -1.57
PRPF3O43395 RN7SKP216-201ENST00000411050 312 ntBASIC5.25□□□□□ -1.57
PRPF3O43395 RPL37P18-201ENST00000411602 243 ntBASIC5.25□□□□□ -1.57
PRPF3O43395 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC5.25□□□□□ -1.57
PRPF3O43395 AL022400.1-201ENST00000423946 935 ntBASIC5.25□□□□□ -1.57
PRPF3O43395 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
PRPF3O43395 RPS25P9-201ENST00000435591 252 ntBASIC5.25□□□□□ -1.57
PRPF3O43395 UBE2D3P1-201ENST00000436669 444 ntBASIC5.25□□□□□ -1.57
PRPF3O43395 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC5.25□□□□□ -1.57
PRPF3O43395 MTND2P22-201ENST00000444325 1033 ntBASIC5.25□□□□□ -1.57
PRPF3O43395 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC5.25□□□□□ -1.57
PRPF3O43395 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
PRPF3O43395 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC5.25□□□□□ -1.57
PRPF3O43395 KRTAP5-14P-201ENST00000502328 121 ntBASIC5.25□□□□□ -1.57
PRPF3O43395 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms