Protein–RNA interactions for Protein: A0A578

TCRBV5S1A1T, T-cell receptor beta variable 5-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV5S1A1TA0A578 RPL23AP35-201ENST00000451906 501 ntBASIC4.65□□□□□ -1.67
TCRBV5S1A1TA0A578 KATNBL1P6-201ENST00000453433 915 ntBASIC4.65□□□□□ -1.67
TCRBV5S1A1TA0A578 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC4.65□□□□□ -1.67
TCRBV5S1A1TA0A578 RN7SL41P-201ENST00000476144 297 ntBASIC4.65□□□□□ -1.67
TCRBV5S1A1TA0A578 AC116337.2-201ENST00000477662 156 ntBASIC4.65□□□□□ -1.67
TCRBV5S1A1TA0A578 AC109486.1-201ENST00000486833 374 ntBASIC4.65□□□□□ -1.67
TCRBV5S1A1TA0A578 AC093281.2-201ENST00000510153 597 ntBASIC4.65□□□□□ -1.67
TCRBV5S1A1TA0A578 AC109471.1-201ENST00000511631 612 ntBASIC4.65□□□□□ -1.67
TCRBV5S1A1TA0A578 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC4.65□□□□□ -1.67
TCRBV5S1A1TA0A578 AC108471.1-201ENST00000513977 287 ntBASIC4.65□□□□□ -1.67
TCRBV5S1A1TA0A578 RNU6-720P-201ENST00000516363 108 ntBASIC4.65□□□□□ -1.67
TCRBV5S1A1TA0A578 AP001189.2-201ENST00000527320 189 ntBASIC4.65□□□□□ -1.67
TCRBV5S1A1TA0A578 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC4.65□□□□□ -1.67
TCRBV5S1A1TA0A578 AP002963.1-201ENST00000530590 184 ntBASIC4.65□□□□□ -1.67
TCRBV5S1A1TA0A578 RERGL-202ENST00000536890 367 ntTSL 3 BASIC4.65□□□□□ -1.67
TCRBV5S1A1TA0A578 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
TCRBV5S1A1TA0A578 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.65□□□□□ -1.67
TCRBV5S1A1TA0A578 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.65□□□□□ -1.67
TCRBV5S1A1TA0A578 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.65□□□□□ -1.67
TCRBV5S1A1TA0A578 AC069061.3-201ENST00000582254 823 ntBASIC4.65□□□□□ -1.67
TCRBV5S1A1TA0A578 AC079089.3-201ENST00000603094 673 ntBASIC4.65□□□□□ -1.67
TCRBV5S1A1TA0A578 AL390816.3-201ENST00000604527 1066 ntBASIC4.65□□□□□ -1.67
TCRBV5S1A1TA0A578 AC091946.2-201ENST00000606105 291 ntBASIC4.65□□□□□ -1.67
TCRBV5S1A1TA0A578 AL031775.1-201ENST00000607014 887 ntBASIC4.65□□□□□ -1.67
TCRBV5S1A1TA0A578 Z98200.1-201ENST00000607298 470 ntBASIC4.65□□□□□ -1.67
TCRBV5S1A1TA0A578 AC092354.2-201ENST00000607786 514 ntBASIC4.65□□□□□ -1.67
TCRBV5S1A1TA0A578 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC4.65□□□□□ -1.67
TCRBV5S1A1TA0A578 AC015540.1-201ENST00000615828 501 ntBASIC4.65□□□□□ -1.67
TCRBV5S1A1TA0A578 AC100827.5-201ENST00000615883 426 ntBASIC4.65□□□□□ -1.67
TCRBV5S1A1TA0A578 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC4.65□□□□□ -1.67
TCRBV5S1A1TA0A578 uc_338.9-201ENST00000617424 182 ntBASIC4.65□□□□□ -1.67
TCRBV5S1A1TA0A578 AC018755.4-201ENST00000619715 454 ntBASIC4.65□□□□□ -1.67
TCRBV5S1A1TA0A578 AC099842.1-201ENST00000619919 596 ntBASIC4.65□□□□□ -1.67
TCRBV5S1A1TA0A578 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
TCRBV5S1A1TA0A578 AC099063.3-201ENST00000642066 185 ntBASIC4.65□□□□□ -1.67
TCRBV5S1A1TA0A578 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
TCRBV5S1A1TA0A578 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
TCRBV5S1A1TA0A578 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
TCRBV5S1A1TA0A578 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
TCRBV5S1A1TA0A578 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
TCRBV5S1A1TA0A578 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
TCRBV5S1A1TA0A578 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
TCRBV5S1A1TA0A578 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
TCRBV5S1A1TA0A578 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.64□□□□□ -1.67
TCRBV5S1A1TA0A578 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
TCRBV5S1A1TA0A578 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.64□□□□□ -1.67
TCRBV5S1A1TA0A578 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
TCRBV5S1A1TA0A578 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
TCRBV5S1A1TA0A578 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC4.64□□□□□ -1.67
TCRBV5S1A1TA0A578 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
TCRBV5S1A1TA0A578 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.64□□□□□ -1.67
TCRBV5S1A1TA0A578 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC4.64□□□□□ -1.67
TCRBV5S1A1TA0A578 RNU4-21P-201ENST00000362802 126 ntBASIC4.64□□□□□ -1.67
TCRBV5S1A1TA0A578 RNA5SP505-201ENST00000364748 108 ntBASIC4.64□□□□□ -1.67
TCRBV5S1A1TA0A578 MIR129-1-201ENST00000384972 72 ntBASIC4.64□□□□□ -1.67
TCRBV5S1A1TA0A578 MIR3065-201ENST00000390137 79 ntBASIC4.64□□□□□ -1.67
TCRBV5S1A1TA0A578 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
TCRBV5S1A1TA0A578 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
TCRBV5S1A1TA0A578 HDGFP1-201ENST00000405943 252 ntBASIC4.64□□□□□ -1.67
TCRBV5S1A1TA0A578 PGBD4P8-201ENST00000412993 562 ntBASIC4.64□□□□□ -1.67
TCRBV5S1A1TA0A578 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC4.64□□□□□ -1.67
TCRBV5S1A1TA0A578 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC4.64□□□□□ -1.67
TCRBV5S1A1TA0A578 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.64□□□□□ -1.67
TCRBV5S1A1TA0A578 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.64□□□□□ -1.67
TCRBV5S1A1TA0A578 AC092641.1-201ENST00000440229 772 ntBASIC4.64□□□□□ -1.67
TCRBV5S1A1TA0A578 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.64□□□□□ -1.67
TCRBV5S1A1TA0A578 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC4.64□□□□□ -1.67
TCRBV5S1A1TA0A578 YWHAQP9-201ENST00000445891 512 ntBASIC4.64□□□□□ -1.67
TCRBV5S1A1TA0A578 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC4.64□□□□□ -1.67
TCRBV5S1A1TA0A578 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC4.64□□□□□ -1.67
TCRBV5S1A1TA0A578 RPL36AP33-201ENST00000450395 310 ntBASIC4.64□□□□□ -1.67
TCRBV5S1A1TA0A578 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.64□□□□□ -1.67
TCRBV5S1A1TA0A578 RPL23AP71-201ENST00000470966 469 ntBASIC4.64□□□□□ -1.67
TCRBV5S1A1TA0A578 AC012158.1-204ENST00000483430 465 ntBASIC4.64□□□□□ -1.67
TCRBV5S1A1TA0A578 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC4.64□□□□□ -1.67
TCRBV5S1A1TA0A578 AC022447.1-201ENST00000515358 464 ntBASIC4.64□□□□□ -1.67
TCRBV5S1A1TA0A578 RNA5SP497-201ENST00000516081 97 ntBASIC4.64□□□□□ -1.67
TCRBV5S1A1TA0A578 IGLV3-26-201ENST00000520756 302 ntBASIC4.64□□□□□ -1.67
TCRBV5S1A1TA0A578 COX6B1P6-201ENST00000522347 255 ntBASIC4.64□□□□□ -1.67
TCRBV5S1A1TA0A578 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC4.64□□□□□ -1.67
TCRBV5S1A1TA0A578 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.64□□□□□ -1.67
TCRBV5S1A1TA0A578 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC4.64□□□□□ -1.67
TCRBV5S1A1TA0A578 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.64□□□□□ -1.67
TCRBV5S1A1TA0A578 AC068831.4-201ENST00000556118 109 ntBASIC4.64□□□□□ -1.67
TCRBV5S1A1TA0A578 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC4.64□□□□□ -1.67
TCRBV5S1A1TA0A578 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.64□□□□□ -1.67
TCRBV5S1A1TA0A578 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC4.64□□□□□ -1.67
TCRBV5S1A1TA0A578 MTCYBP22-201ENST00000603788 447 ntBASIC4.64□□□□□ -1.67
TCRBV5S1A1TA0A578 AC079587.1-201ENST00000603846 277 ntBASIC4.64□□□□□ -1.67
TCRBV5S1A1TA0A578 AC092354.1-201ENST00000606057 376 ntBASIC4.64□□□□□ -1.67
TCRBV5S1A1TA0A578 AC012409.3-201ENST00000611343 981 ntBASIC4.64□□□□□ -1.67
TCRBV5S1A1TA0A578 AC005332.10-201ENST00000612725 619 ntBASIC4.64□□□□□ -1.67
TCRBV5S1A1TA0A578 MIR7154-201ENST00000620673 73 ntBASIC4.64□□□□□ -1.67
TCRBV5S1A1TA0A578 AC015726.3-201ENST00000624501 418 ntBASIC4.64□□□□□ -1.67
TCRBV5S1A1TA0A578 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.64□□□□□ -1.67
TCRBV5S1A1TA0A578 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
TCRBV5S1A1TA0A578 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.64□□□□□ -1.67
TCRBV5S1A1TA0A578 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.64□□□□□ -1.67
TCRBV5S1A1TA0A578 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
TCRBV5S1A1TA0A578 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 522 ms