Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 AC083982.1-201ENST00000485679 344 ntBASIC4.46□□□□□ -1.7
TCRBV7S3A2A0A539 RPL7L1P13-201ENST00000511702 739 ntBASIC4.46□□□□□ -1.7
TCRBV7S3A2A0A539 RNU6-202P-201ENST00000515998 96 ntBASIC4.46□□□□□ -1.7
TCRBV7S3A2A0A539 RNU6-759P-201ENST00000516740 103 ntBASIC4.46□□□□□ -1.7
TCRBV7S3A2A0A539 HMGB1P19-201ENST00000517578 577 ntBASIC4.46□□□□□ -1.7
TCRBV7S3A2A0A539 SOD1P3-201ENST00000518682 454 ntBASIC4.46□□□□□ -1.7
TCRBV7S3A2A0A539 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
TCRBV7S3A2A0A539 ARL2BPP5-201ENST00000523141 481 ntBASIC4.46□□□□□ -1.7
TCRBV7S3A2A0A539 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
TCRBV7S3A2A0A539 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.46□□□□□ -1.7
TCRBV7S3A2A0A539 AC084824.1-201ENST00000550917 1005 ntBASIC4.46□□□□□ -1.7
TCRBV7S3A2A0A539 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC4.46□□□□□ -1.7
TCRBV7S3A2A0A539 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
TCRBV7S3A2A0A539 NBR2-204ENST00000587322 63 ntBASIC4.46□□□□□ -1.7
TCRBV7S3A2A0A539 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC4.46□□□□□ -1.7
TCRBV7S3A2A0A539 AC006539.2-201ENST00000601729 572 ntBASIC4.46□□□□□ -1.7
TCRBV7S3A2A0A539 AC087283.1-201ENST00000604029 1074 ntBASIC4.46□□□□□ -1.7
TCRBV7S3A2A0A539 AC010738.1-201ENST00000604970 987 ntBASIC4.46□□□□□ -1.7
TCRBV7S3A2A0A539 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC4.46□□□□□ -1.7
TCRBV7S3A2A0A539 AL031666.3-201ENST00000609320 1006 ntBASIC4.46□□□□□ -1.7
TCRBV7S3A2A0A539 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC4.46□□□□□ -1.7
TCRBV7S3A2A0A539 AL136981.2-201ENST00000617319 734 ntBASIC4.46□□□□□ -1.7
TCRBV7S3A2A0A539 AC007546.1-201ENST00000619452 559 ntBASIC4.46□□□□□ -1.7
TCRBV7S3A2A0A539 AP003072.4-201ENST00000624580 310 ntBASIC4.46□□□□□ -1.7
TCRBV7S3A2A0A539 WDR75-207ENST00000631047 270 ntTSL 5 BASIC4.46□□□□□ -1.7
TCRBV7S3A2A0A539 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.46□□□□□ -1.7
TCRBV7S3A2A0A539 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC4.46□□□□□ -1.7
TCRBV7S3A2A0A539 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
TCRBV7S3A2A0A539 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
TCRBV7S3A2A0A539 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
TCRBV7S3A2A0A539 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
TCRBV7S3A2A0A539 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
TCRBV7S3A2A0A539 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.46□□□□□ -1.7
TCRBV7S3A2A0A539 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
TCRBV7S3A2A0A539 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
TCRBV7S3A2A0A539 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.45□□□□□ -1.7
TCRBV7S3A2A0A539 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
TCRBV7S3A2A0A539 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.45□□□□□ -1.7
TCRBV7S3A2A0A539 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC4.45□□□□□ -1.7
TCRBV7S3A2A0A539 OFD1P5Y-201ENST00000447585 2590 ntBASIC4.45□□□□□ -1.7
TCRBV7S3A2A0A539 Z98755.1-201ENST00000407015 1384 ntBASIC4.45□□□□□ -1.7
TCRBV7S3A2A0A539 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
TCRBV7S3A2A0A539 AC008033.1-201ENST00000216407 1162 ntBASIC4.45□□□□□ -1.7
TCRBV7S3A2A0A539 AC016716.1-201ENST00000265882 708 ntBASIC4.45□□□□□ -1.7
TCRBV7S3A2A0A539 MIR506-201ENST00000384998 124 ntBASIC4.45□□□□□ -1.7
TCRBV7S3A2A0A539 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC4.45□□□□□ -1.7
TCRBV7S3A2A0A539 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.45□□□□□ -1.7
TCRBV7S3A2A0A539 TPT1P2-201ENST00000413105 503 ntBASIC4.45□□□□□ -1.7
TCRBV7S3A2A0A539 PRELID3BP11-201ENST00000414230 479 ntBASIC4.45□□□□□ -1.7
TCRBV7S3A2A0A539 P2RY10P2-201ENST00000416730 913 ntBASIC4.45□□□□□ -1.7
TCRBV7S3A2A0A539 RBMY2KP-201ENST00000418221 992 ntBASIC4.45□□□□□ -1.7
TCRBV7S3A2A0A539 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC4.45□□□□□ -1.7
TCRBV7S3A2A0A539 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.45□□□□□ -1.7
TCRBV7S3A2A0A539 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC4.45□□□□□ -1.7
TCRBV7S3A2A0A539 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC4.45□□□□□ -1.7
TCRBV7S3A2A0A539 AC019178.2-201ENST00000423595 505 ntBASIC4.45□□□□□ -1.7
TCRBV7S3A2A0A539 PRELID3BP10-201ENST00000431957 584 ntBASIC4.45□□□□□ -1.7
TCRBV7S3A2A0A539 AC010881.1-201ENST00000433830 235 ntBASIC4.45□□□□□ -1.7
TCRBV7S3A2A0A539 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.45□□□□□ -1.7
TCRBV7S3A2A0A539 AL359265.2-201ENST00000434367 631 ntBASIC4.45□□□□□ -1.7
TCRBV7S3A2A0A539 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC4.45□□□□□ -1.7
TCRBV7S3A2A0A539 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.45□□□□□ -1.7
TCRBV7S3A2A0A539 AL591503.2-201ENST00000442314 1005 ntBASIC4.45□□□□□ -1.7
TCRBV7S3A2A0A539 AC118469.1-201ENST00000442943 488 ntBASIC4.45□□□□□ -1.7
TCRBV7S3A2A0A539 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC4.45□□□□□ -1.7
TCRBV7S3A2A0A539 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC4.45□□□□□ -1.7
TCRBV7S3A2A0A539 RPS27AP8-201ENST00000452665 445 ntBASIC4.45□□□□□ -1.7
TCRBV7S3A2A0A539 AC002553.2-201ENST00000453217 340 ntBASIC4.45□□□□□ -1.7
TCRBV7S3A2A0A539 HMGN3P1-201ENST00000453847 193 ntBASIC4.45□□□□□ -1.7
TCRBV7S3A2A0A539 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC4.45□□□□□ -1.7
TCRBV7S3A2A0A539 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC4.45□□□□□ -1.7
TCRBV7S3A2A0A539 AC018638.3-201ENST00000461273 132 ntBASIC4.45□□□□□ -1.7
TCRBV7S3A2A0A539 RPL7P22-201ENST00000466005 733 ntBASIC4.45□□□□□ -1.7
TCRBV7S3A2A0A539 AC006967.1-201ENST00000467608 589 ntBASIC4.45□□□□□ -1.7
TCRBV7S3A2A0A539 RPL35AP15-201ENST00000468042 339 ntBASIC4.45□□□□□ -1.7
TCRBV7S3A2A0A539 RN7SL354P-201ENST00000469282 294 ntBASIC4.45□□□□□ -1.7
TCRBV7S3A2A0A539 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC4.45□□□□□ -1.7
TCRBV7S3A2A0A539 RN7SL826P-201ENST00000479724 288 ntBASIC4.45□□□□□ -1.7
TCRBV7S3A2A0A539 AC112198.1-201ENST00000505369 1220 ntBASIC4.45□□□□□ -1.7
TCRBV7S3A2A0A539 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC4.45□□□□□ -1.7
TCRBV7S3A2A0A539 ATP1B1P1-201ENST00000509767 915 ntBASIC4.45□□□□□ -1.7
TCRBV7S3A2A0A539 HSPE1P23-201ENST00000509838 286 ntBASIC4.45□□□□□ -1.7
TCRBV7S3A2A0A539 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC4.45□□□□□ -1.7
TCRBV7S3A2A0A539 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC4.45□□□□□ -1.7
TCRBV7S3A2A0A539 AC090819.1-201ENST00000523800 1111 ntBASIC4.45□□□□□ -1.7
TCRBV7S3A2A0A539 PHBP17-201ENST00000528576 541 ntBASIC4.45□□□□□ -1.7
TCRBV7S3A2A0A539 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC4.45□□□□□ -1.7
TCRBV7S3A2A0A539 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC4.45□□□□□ -1.7
TCRBV7S3A2A0A539 NDUFAF4P1-201ENST00000559425 519 ntBASIC4.45□□□□□ -1.7
TCRBV7S3A2A0A539 AC090515.3-201ENST00000560431 315 ntBASIC4.45□□□□□ -1.7
TCRBV7S3A2A0A539 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC4.45□□□□□ -1.7
TCRBV7S3A2A0A539 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC4.45□□□□□ -1.7
TCRBV7S3A2A0A539 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC4.45□□□□□ -1.7
TCRBV7S3A2A0A539 AC013244.1-201ENST00000604279 193 ntBASIC4.45□□□□□ -1.7
TCRBV7S3A2A0A539 CLPTM1LP1-201ENST00000604519 484 ntBASIC4.45□□□□□ -1.7
TCRBV7S3A2A0A539 AL163642.2-201ENST00000604722 1019 ntBASIC4.45□□□□□ -1.7
TCRBV7S3A2A0A539 AC005962.2-201ENST00000611427 652 ntBASIC4.45□□□□□ -1.7
TCRBV7S3A2A0A539 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC4.45□□□□□ -1.7
TCRBV7S3A2A0A539 AL133243.1-201ENST00000614487 366 ntBASIC4.45□□□□□ -1.7
TCRBV7S3A2A0A539 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 124.3 ms