Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
HLA-DRB4X5D2U9 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
HLA-DRB4X5D2U9 RNA5SP479-201ENST00000364858 117 ntBASIC2.7□□□□□ -1.98
HLA-DRB4X5D2U9 AL445189.1-201ENST00000405722 338 ntBASIC2.7□□□□□ -1.98
HLA-DRB4X5D2U9 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
HLA-DRB4X5D2U9 ELOCP6-201ENST00000429066 328 ntBASIC2.7□□□□□ -1.98
HLA-DRB4X5D2U9 RPS7P5-201ENST00000441482 581 ntBASIC2.7□□□□□ -1.98
HLA-DRB4X5D2U9 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
HLA-DRB4X5D2U9 HMGN2P21-201ENST00000447764 270 ntBASIC2.7□□□□□ -1.98
HLA-DRB4X5D2U9 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC2.7□□□□□ -1.98
HLA-DRB4X5D2U9 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC2.7□□□□□ -1.98
HLA-DRB4X5D2U9 CALM1P2-201ENST00000452941 448 ntBASIC2.7□□□□□ -1.98
HLA-DRB4X5D2U9 RPS4XP2-201ENST00000458402 793 ntBASIC2.7□□□□□ -1.98
HLA-DRB4X5D2U9 ELOCP12-201ENST00000458706 328 ntBASIC2.7□□□□□ -1.98
HLA-DRB4X5D2U9 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC2.7□□□□□ -1.98
HLA-DRB4X5D2U9 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC2.7□□□□□ -1.98
HLA-DRB4X5D2U9 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC2.7□□□□□ -1.98
HLA-DRB4X5D2U9 AC021146.5-201ENST00000503544 545 ntBASIC2.7□□□□□ -1.98
HLA-DRB4X5D2U9 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC2.7□□□□□ -1.98
HLA-DRB4X5D2U9 IL7R-208ENST00000511982 612 ntTSL 2 BASIC2.7□□□□□ -1.98
HLA-DRB4X5D2U9 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC2.7□□□□□ -1.98
HLA-DRB4X5D2U9 RNU6-579P-201ENST00000516879 102 ntBASIC2.7□□□□□ -1.98
HLA-DRB4X5D2U9 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC2.7□□□□□ -1.98
HLA-DRB4X5D2U9 RANP9-201ENST00000519957 271 ntBASIC2.7□□□□□ -1.98
HLA-DRB4X5D2U9 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC2.7□□□□□ -1.98
HLA-DRB4X5D2U9 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC2.7□□□□□ -1.98
HLA-DRB4X5D2U9 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC2.7□□□□□ -1.98
HLA-DRB4X5D2U9 AC087888.1-201ENST00000550884 1254 ntBASIC2.7□□□□□ -1.98
HLA-DRB4X5D2U9 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC2.7□□□□□ -1.98
HLA-DRB4X5D2U9 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
HLA-DRB4X5D2U9 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC2.7□□□□□ -1.98
HLA-DRB4X5D2U9 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC2.7□□□□□ -1.98
HLA-DRB4X5D2U9 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC2.7□□□□□ -1.98
HLA-DRB4X5D2U9 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC2.7□□□□□ -1.98
HLA-DRB4X5D2U9 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC2.7□□□□□ -1.98
HLA-DRB4X5D2U9 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC2.7□□□□□ -1.98
HLA-DRB4X5D2U9 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC2.7□□□□□ -1.98
HLA-DRB4X5D2U9 AP003117.2-201ENST00000606010 545 ntBASIC2.7□□□□□ -1.98
HLA-DRB4X5D2U9 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC2.7□□□□□ -1.98
HLA-DRB4X5D2U9 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC2.7□□□□□ -1.98
HLA-DRB4X5D2U9 AC005183.1-201ENST00000603687 1979 ntBASIC2.7□□□□□ -1.98
HLA-DRB4X5D2U9 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC2.7□□□□□ -1.98
HLA-DRB4X5D2U9 MTND5P27-201ENST00000428871 1720 ntBASIC2.7□□□□□ -1.98
HLA-DRB4X5D2U9 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
HLA-DRB4X5D2U9 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC2.69□□□□□ -1.98
HLA-DRB4X5D2U9 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC2.69□□□□□ -1.98
HLA-DRB4X5D2U9 AL592494.2-201ENST00000425455 1548 ntBASIC2.69□□□□□ -1.98
HLA-DRB4X5D2U9 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
HLA-DRB4X5D2U9 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
HLA-DRB4X5D2U9 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
HLA-DRB4X5D2U9 HMGB1P10-201ENST00000395823 563 ntBASIC2.69□□□□□ -1.98
HLA-DRB4X5D2U9 AC126124.2-201ENST00000413542 321 ntBASIC2.69□□□□□ -1.98
HLA-DRB4X5D2U9 AC245291.1-201ENST00000419501 328 ntBASIC2.69□□□□□ -1.98
HLA-DRB4X5D2U9 GTF2IP23-201ENST00000423746 351 ntBASIC2.69□□□□□ -1.98
HLA-DRB4X5D2U9 SETP5-201ENST00000437270 562 ntBASIC2.69□□□□□ -1.98
HLA-DRB4X5D2U9 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC2.69□□□□□ -1.98
HLA-DRB4X5D2U9 NOTCH2P1-201ENST00000443481 624 ntBASIC2.69□□□□□ -1.98
HLA-DRB4X5D2U9 RPS3AP46-201ENST00000448352 682 ntBASIC2.69□□□□□ -1.98
HLA-DRB4X5D2U9 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC2.69□□□□□ -1.98
HLA-DRB4X5D2U9 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC2.69□□□□□ -1.98
HLA-DRB4X5D2U9 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC2.69□□□□□ -1.98
HLA-DRB4X5D2U9 AC006511.1-201ENST00000470614 315 ntBASIC2.69□□□□□ -1.98
HLA-DRB4X5D2U9 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
HLA-DRB4X5D2U9 OR5H4P-201ENST00000510851 923 ntBASIC2.69□□□□□ -1.98
HLA-DRB4X5D2U9 MTND4LP31-201ENST00000514859 294 ntBASIC2.69□□□□□ -1.98
HLA-DRB4X5D2U9 AC068657.1-201ENST00000520807 306 ntBASIC2.69□□□□□ -1.98
HLA-DRB4X5D2U9 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC2.69□□□□□ -1.98
HLA-DRB4X5D2U9 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC2.69□□□□□ -1.98
HLA-DRB4X5D2U9 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC2.69□□□□□ -1.98
HLA-DRB4X5D2U9 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC2.69□□□□□ -1.98
HLA-DRB4X5D2U9 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC2.69□□□□□ -1.98
HLA-DRB4X5D2U9 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC2.69□□□□□ -1.98
HLA-DRB4X5D2U9 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC2.69□□□□□ -1.98
HLA-DRB4X5D2U9 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC2.69□□□□□ -1.98
HLA-DRB4X5D2U9 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
HLA-DRB4X5D2U9 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC2.69□□□□□ -1.98
HLA-DRB4X5D2U9 AL161912.2-201ENST00000565707 3007 ntBASIC2.68□□□□□ -1.98
HLA-DRB4X5D2U9 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
HLA-DRB4X5D2U9 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
HLA-DRB4X5D2U9 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
HLA-DRB4X5D2U9 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
HLA-DRB4X5D2U9 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC2.68□□□□□ -1.98
HLA-DRB4X5D2U9 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC2.68□□□□□ -1.98
HLA-DRB4X5D2U9 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
HLA-DRB4X5D2U9 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC2.68□□□□□ -1.98
HLA-DRB4X5D2U9 RNA5SP383-201ENST00000362934 120 ntBASIC2.68□□□□□ -1.98
HLA-DRB4X5D2U9 RNU1-64P-201ENST00000365443 163 ntBASIC2.68□□□□□ -1.98
HLA-DRB4X5D2U9 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
HLA-DRB4X5D2U9 CGA-201ENST00000369582 729 ntTSL 5 BASIC2.68□□□□□ -1.98
HLA-DRB4X5D2U9 U8.11-201ENST00000384699 133 ntBASIC2.68□□□□□ -1.98
HLA-DRB4X5D2U9 U8.12-201ENST00000384701 133 ntBASIC2.68□□□□□ -1.98
HLA-DRB4X5D2U9 AC007066.1-201ENST00000392902 381 ntBASIC2.68□□□□□ -1.98
HLA-DRB4X5D2U9 AL034403.1-201ENST00000399414 885 ntBASIC2.68□□□□□ -1.98
HLA-DRB4X5D2U9 HMGB1P13-201ENST00000406019 642 ntBASIC2.68□□□□□ -1.98
HLA-DRB4X5D2U9 RN7SKP159-201ENST00000410657 292 ntBASIC2.68□□□□□ -1.98
HLA-DRB4X5D2U9 ATP5A1P2-201ENST00000412323 255 ntBASIC2.68□□□□□ -1.98
HLA-DRB4X5D2U9 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC2.68□□□□□ -1.98
HLA-DRB4X5D2U9 AC245054.1-201ENST00000420944 258 ntBASIC2.68□□□□□ -1.98
HLA-DRB4X5D2U9 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
HLA-DRB4X5D2U9 GLRXP1-201ENST00000423261 334 ntBASIC2.68□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms