Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 MIR6885-201ENST00000612241 66 ntBASIC1.71□□□□□ -2.14
LINC01558Q9Y6Z2 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC1.71□□□□□ -2.14
LINC01558Q9Y6Z2 MIR6837-201ENST00000620884 64 ntBASIC1.71□□□□□ -2.14
LINC01558Q9Y6Z2 AC091903.1-201ENST00000624322 454 ntBASIC1.71□□□□□ -2.14
LINC01558Q9Y6Z2 CCT7-217ENST00000626868 249 ntTSL 5 BASIC1.71□□□□□ -2.14
LINC01558Q9Y6Z2 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
LINC01558Q9Y6Z2 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC1.71□□□□□ -2.14
LINC01558Q9Y6Z2 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC1.71□□□□□ -2.14
LINC01558Q9Y6Z2 AP000553.6-201ENST00000641242 118 ntBASIC1.71□□□□□ -2.14
LINC01558Q9Y6Z2 BCLAF1P1-201ENST00000505813 2752 ntBASIC1.71□□□□□ -2.14
LINC01558Q9Y6Z2 CD36-221ENST00000534394 1741 ntTSL 2 BASIC1.71□□□□□ -2.14
LINC01558Q9Y6Z2 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC1.71□□□□□ -2.14
LINC01558Q9Y6Z2 AP001350.1-201ENST00000601906 1524 ntBASIC1.71□□□□□ -2.14
LINC01558Q9Y6Z2 AC026951.1-201ENST00000559530 2459 ntBASIC1.71□□□□□ -2.14
LINC01558Q9Y6Z2 ASNSP3-201ENST00000451989 1306 ntBASIC1.7□□□□□ -2.14
LINC01558Q9Y6Z2 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
LINC01558Q9Y6Z2 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
LINC01558Q9Y6Z2 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
LINC01558Q9Y6Z2 AP003122.5-201ENST00000527668 3766 ntBASIC1.7□□□□□ -2.14
LINC01558Q9Y6Z2 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
LINC01558Q9Y6Z2 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
LINC01558Q9Y6Z2 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
LINC01558Q9Y6Z2 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
LINC01558Q9Y6Z2 CGA-201ENST00000369582 729 ntTSL 5 BASIC1.7□□□□□ -2.14
LINC01558Q9Y6Z2 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
LINC01558Q9Y6Z2 RNU1-138P-201ENST00000384093 164 ntBASIC1.7□□□□□ -2.14
LINC01558Q9Y6Z2 HIST1H2BPS2-201ENST00000402707 340 ntBASIC1.7□□□□□ -2.14
LINC01558Q9Y6Z2 AL049697.2-201ENST00000403708 294 ntBASIC1.7□□□□□ -2.14
LINC01558Q9Y6Z2 AL355379.1-201ENST00000405542 640 ntBASIC1.7□□□□□ -2.14
LINC01558Q9Y6Z2 SNORA81-201ENST00000408493 178 ntBASIC1.7□□□□□ -2.14
LINC01558Q9Y6Z2 SNX10-203ENST00000409367 746 ntTSL 5 BASIC1.7□□□□□ -2.14
LINC01558Q9Y6Z2 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC1.7□□□□□ -2.14
LINC01558Q9Y6Z2 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC1.7□□□□□ -2.14
LINC01558Q9Y6Z2 GTF3AP1-201ENST00000416942 1004 ntBASIC1.7□□□□□ -2.14
LINC01558Q9Y6Z2 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC1.7□□□□□ -2.14
LINC01558Q9Y6Z2 AC012065.2-201ENST00000421295 375 ntBASIC1.7□□□□□ -2.14
LINC01558Q9Y6Z2 COX6CP17-201ENST00000421389 185 ntBASIC1.7□□□□□ -2.14
LINC01558Q9Y6Z2 AL139158.1-201ENST00000424719 340 ntBASIC1.7□□□□□ -2.14
LINC01558Q9Y6Z2 AC233728.2-201ENST00000425348 757 ntBASIC1.7□□□□□ -2.14
LINC01558Q9Y6Z2 KRT18P53-201ENST00000431919 117 ntBASIC1.7□□□□□ -2.14
LINC01558Q9Y6Z2 AC129850.1-201ENST00000436203 508 ntBASIC1.7□□□□□ -2.14
LINC01558Q9Y6Z2 AC127537.2-201ENST00000439258 465 ntBASIC1.7□□□□□ -2.14
LINC01558Q9Y6Z2 AL645931.1-201ENST00000439737 410 ntBASIC1.7□□□□□ -2.14
LINC01558Q9Y6Z2 RPS11P1-201ENST00000451072 473 ntBASIC1.7□□□□□ -2.14
LINC01558Q9Y6Z2 CYCSP35-201ENST00000451978 304 ntBASIC1.7□□□□□ -2.14
LINC01558Q9Y6Z2 AL445669.2-201ENST00000454425 421 ntBASIC1.7□□□□□ -2.14
LINC01558Q9Y6Z2 AL109741.2-201ENST00000455561 343 ntBASIC1.7□□□□□ -2.14
LINC01558Q9Y6Z2 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC1.7□□□□□ -2.14
LINC01558Q9Y6Z2 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC1.7□□□□□ -2.14
LINC01558Q9Y6Z2 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC1.7□□□□□ -2.14
LINC01558Q9Y6Z2 RNU7-27P-201ENST00000459281 62 ntBASIC1.7□□□□□ -2.14
LINC01558Q9Y6Z2 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC1.7□□□□□ -2.14
LINC01558Q9Y6Z2 HMGB1P25-201ENST00000468402 607 ntBASIC1.7□□□□□ -2.14
LINC01558Q9Y6Z2 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC1.7□□□□□ -2.14
LINC01558Q9Y6Z2 AC103975.1-201ENST00000482506 483 ntBASIC1.7□□□□□ -2.14
LINC01558Q9Y6Z2 RN7SL691P-201ENST00000494487 301 ntBASIC1.7□□□□□ -2.14
LINC01558Q9Y6Z2 AC111000.2-201ENST00000507775 550 ntBASIC1.7□□□□□ -2.14
LINC01558Q9Y6Z2 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC1.7□□□□□ -2.14
LINC01558Q9Y6Z2 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC1.7□□□□□ -2.14
LINC01558Q9Y6Z2 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC1.7□□□□□ -2.14
LINC01558Q9Y6Z2 AC099522.1-202ENST00000514718 367 ntBASIC1.7□□□□□ -2.14
LINC01558Q9Y6Z2 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC1.7□□□□□ -2.14
LINC01558Q9Y6Z2 CHCHD7-205ENST00000517933 580 ntAPPRIS P1 TSL 4 BASIC1.7□□□□□ -2.14
LINC01558Q9Y6Z2 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC1.7□□□□□ -2.14
LINC01558Q9Y6Z2 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC1.7□□□□□ -2.14
LINC01558Q9Y6Z2 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC1.7□□□□□ -2.14
LINC01558Q9Y6Z2 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC1.7□□□□□ -2.14
LINC01558Q9Y6Z2 AC107016.2-201ENST00000547968 190 ntBASIC1.7□□□□□ -2.14
LINC01558Q9Y6Z2 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC1.7□□□□□ -2.14
LINC01558Q9Y6Z2 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC1.7□□□□□ -2.14
LINC01558Q9Y6Z2 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC1.7□□□□□ -2.14
LINC01558Q9Y6Z2 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC1.7□□□□□ -2.14
LINC01558Q9Y6Z2 AC087763.1-201ENST00000603391 286 ntBASIC1.7□□□□□ -2.14
LINC01558Q9Y6Z2 AC012511.1-201ENST00000608140 449 ntBASIC1.7□□□□□ -2.14
LINC01558Q9Y6Z2 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC1.7□□□□□ -2.14
LINC01558Q9Y6Z2 AC126915.2-201ENST00000610957 190 ntBASIC1.7□□□□□ -2.14
LINC01558Q9Y6Z2 AC126175.1-201ENST00000617041 758 ntBASIC1.7□□□□□ -2.14
LINC01558Q9Y6Z2 Z99129.2-201ENST00000619967 314 ntBASIC1.7□□□□□ -2.14
LINC01558Q9Y6Z2 FO624990.1-201ENST00000636373 85 ntBASIC1.7□□□□□ -2.14
LINC01558Q9Y6Z2 Clostridiales-1.2-201ENST00000636724 160 ntBASIC1.7□□□□□ -2.14
LINC01558Q9Y6Z2 AL049767.1-202ENST00000637826 242 ntBASIC1.7□□□□□ -2.14
LINC01558Q9Y6Z2 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
LINC01558Q9Y6Z2 OSBPL9P4-201ENST00000371707 1800 ntBASIC1.7□□□□□ -2.14
LINC01558Q9Y6Z2 AC032011.1-201ENST00000611703 1549 ntBASIC1.7□□□□□ -2.14
LINC01558Q9Y6Z2 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC1.7□□□□□ -2.14
LINC01558Q9Y6Z2 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC1.69□□□□□ -2.14
LINC01558Q9Y6Z2 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
LINC01558Q9Y6Z2 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC1.69□□□□□ -2.14
LINC01558Q9Y6Z2 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC1.69□□□□□ -2.14
LINC01558Q9Y6Z2 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
LINC01558Q9Y6Z2 MRPL47-201ENST00000259038 1126 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
LINC01558Q9Y6Z2 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
LINC01558Q9Y6Z2 SNORA25.6-201ENST00000364121 118 ntBASIC1.69□□□□□ -2.14
LINC01558Q9Y6Z2 SNORA14A-201ENST00000364773 135 ntBASIC1.69□□□□□ -2.14
LINC01558Q9Y6Z2 RNA5SP427-201ENST00000365323 119 ntBASIC1.69□□□□□ -2.14
LINC01558Q9Y6Z2 AL356057.2-201ENST00000403318 432 ntBASIC1.69□□□□□ -2.14
LINC01558Q9Y6Z2 MIR1231-201ENST00000408101 92 ntBASIC1.69□□□□□ -2.14
LINC01558Q9Y6Z2 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC1.69□□□□□ -2.14
LINC01558Q9Y6Z2 AL451074.5-201ENST00000415894 435 ntBASIC1.69□□□□□ -2.14
LINC01558Q9Y6Z2 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC1.69□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms