Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 AC105031.1-201ENST00000518550 476 ntBASIC6.13□□□□□ -1.43
HRH3Q9Y5N1 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC6.13□□□□□ -1.43
HRH3Q9Y5N1 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC6.13□□□□□ -1.43
HRH3Q9Y5N1 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC6.13□□□□□ -1.43
HRH3Q9Y5N1 FLVCR2-204ENST00000553587 584 ntTSL 2 BASIC6.13□□□□□ -1.43
HRH3Q9Y5N1 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC6.13□□□□□ -1.43
HRH3Q9Y5N1 AL136084.2-222ENST00000589105 885 ntTSL 5 BASIC6.13□□□□□ -1.43
HRH3Q9Y5N1 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC6.13□□□□□ -1.43
HRH3Q9Y5N1 AC012368.3-201ENST00000604190 219 ntBASIC6.13□□□□□ -1.43
HRH3Q9Y5N1 AL354984.3-201ENST00000604803 325 ntBASIC6.13□□□□□ -1.43
HRH3Q9Y5N1 SNORD96A-201ENST00000606577 79 ntBASIC6.13□□□□□ -1.43
HRH3Q9Y5N1 AL591167.1-201ENST00000607321 456 ntBASIC6.13□□□□□ -1.43
HRH3Q9Y5N1 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC6.13□□□□□ -1.43
HRH3Q9Y5N1 AL355365.1-201ENST00000616480 294 ntBASIC6.13□□□□□ -1.43
HRH3Q9Y5N1 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC6.13□□□□□ -1.43
HRH3Q9Y5N1 AC025034.2-201ENST00000623264 286 ntBASIC6.13□□□□□ -1.43
HRH3Q9Y5N1 AC120057.5-201ENST00000623840 154 ntBASIC6.13□□□□□ -1.43
HRH3Q9Y5N1 AC068213.1-201ENST00000625124 226 ntBASIC6.13□□□□□ -1.43
HRH3Q9Y5N1 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
HRH3Q9Y5N1 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
HRH3Q9Y5N1 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
HRH3Q9Y5N1 OR5M2P-202ENST00000641241 4242 ntBASIC6.13□□□□□ -1.43
HRH3Q9Y5N1 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
HRH3Q9Y5N1 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
HRH3Q9Y5N1 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC6.13□□□□□ -1.43
HRH3Q9Y5N1 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
HRH3Q9Y5N1 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC6.13□□□□□ -1.43
HRH3Q9Y5N1 AC104118.1-201ENST00000607625 1589 ntBASIC6.13□□□□□ -1.43
HRH3Q9Y5N1 ZNF519P1-201ENST00000449011 1626 ntBASIC6.13□□□□□ -1.43
HRH3Q9Y5N1 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC6.13□□□□□ -1.43
HRH3Q9Y5N1 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC6.13□□□□□ -1.43
HRH3Q9Y5N1 ZFP90-201ENST00000398253 4384 ntAPPRIS P1 TSL 4 BASIC6.13□□□□□ -1.43
HRH3Q9Y5N1 DPYD-202ENST00000370192 4412 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
HRH3Q9Y5N1 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC6.12□□□□□ -1.43
HRH3Q9Y5N1 LRRC37A16P-202ENST00000586022 3725 ntBASIC6.12□□□□□ -1.43
HRH3Q9Y5N1 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
HRH3Q9Y5N1 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
HRH3Q9Y5N1 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
HRH3Q9Y5N1 RNA5SP140-201ENST00000364524 92 ntBASIC6.12□□□□□ -1.43
HRH3Q9Y5N1 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
HRH3Q9Y5N1 Y_RNA.493-201ENST00000384422 102 ntBASIC6.12□□□□□ -1.43
HRH3Q9Y5N1 UBBP1-201ENST00000392399 473 ntBASIC6.12□□□□□ -1.43
HRH3Q9Y5N1 MIR450B-201ENST00000401182 78 ntBASIC6.12□□□□□ -1.43
HRH3Q9Y5N1 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
HRH3Q9Y5N1 NDUFS5P1-201ENST00000405668 289 ntBASIC6.12□□□□□ -1.43
HRH3Q9Y5N1 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC6.12□□□□□ -1.43
HRH3Q9Y5N1 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
HRH3Q9Y5N1 AC080125.1-201ENST00000414888 684 ntBASIC6.12□□□□□ -1.43
HRH3Q9Y5N1 Z93019.1-201ENST00000416450 973 ntBASIC6.12□□□□□ -1.43
HRH3Q9Y5N1 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
HRH3Q9Y5N1 FGF13-AS1-201ENST00000438238 849 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
HRH3Q9Y5N1 MIR4432HG-201ENST00000441598 470 ntTSL 3 BASIC6.12□□□□□ -1.43
HRH3Q9Y5N1 GAPDHP37-201ENST00000442317 968 ntBASIC6.12□□□□□ -1.43
HRH3Q9Y5N1 AC019185.1-201ENST00000442718 389 ntBASIC6.12□□□□□ -1.43
HRH3Q9Y5N1 CRYGGP-201ENST00000443337 145 ntBASIC6.12□□□□□ -1.43
HRH3Q9Y5N1 EEF1B2P3-201ENST00000447718 678 ntBASIC6.12□□□□□ -1.43
HRH3Q9Y5N1 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC6.12□□□□□ -1.43
HRH3Q9Y5N1 AL162388.1-201ENST00000450912 352 ntBASIC6.12□□□□□ -1.43
HRH3Q9Y5N1 GAS5-223ENST00000452197 483 ntTSL 3 BASIC6.12□□□□□ -1.43
HRH3Q9Y5N1 AL133244.1-201ENST00000456007 258 ntBASIC6.12□□□□□ -1.43
HRH3Q9Y5N1 RNU7-59P-201ENST00000459101 61 ntBASIC6.12□□□□□ -1.43
HRH3Q9Y5N1 AC011476.1-201ENST00000466725 307 ntBASIC6.12□□□□□ -1.43
HRH3Q9Y5N1 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC6.12□□□□□ -1.43
HRH3Q9Y5N1 AC020893.1-201ENST00000502452 580 ntBASIC6.12□□□□□ -1.43
HRH3Q9Y5N1 HIGD1AP13-201ENST00000509878 289 ntBASIC6.12□□□□□ -1.43
HRH3Q9Y5N1 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC6.12□□□□□ -1.43
HRH3Q9Y5N1 AC093853.1-201ENST00000515689 483 ntBASIC6.12□□□□□ -1.43
HRH3Q9Y5N1 SNORD116.3-201ENST00000517176 78 ntBASIC6.12□□□□□ -1.43
HRH3Q9Y5N1 AC087854.1-201ENST00000519706 414 ntBASIC6.12□□□□□ -1.43
HRH3Q9Y5N1 IGHV3-57-201ENST00000520143 280 ntBASIC6.12□□□□□ -1.43
HRH3Q9Y5N1 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC6.12□□□□□ -1.43
HRH3Q9Y5N1 OR8R1P-201ENST00000543943 764 ntBASIC6.12□□□□□ -1.43
HRH3Q9Y5N1 OR11H5P-201ENST00000554039 926 ntBASIC6.12□□□□□ -1.43
HRH3Q9Y5N1 AC005519.1-201ENST00000554490 601 ntBASIC6.12□□□□□ -1.43
HRH3Q9Y5N1 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC6.12□□□□□ -1.43
HRH3Q9Y5N1 AL390718.1-201ENST00000566904 506 ntTSL 3 BASIC6.12□□□□□ -1.43
HRH3Q9Y5N1 AC106782.4-201ENST00000568264 210 ntBASIC6.12□□□□□ -1.43
HRH3Q9Y5N1 MIR4504-201ENST00000577413 92 ntBASIC6.12□□□□□ -1.43
HRH3Q9Y5N1 MIR5583-1-201ENST00000580941 59 ntBASIC6.12□□□□□ -1.43
HRH3Q9Y5N1 AC062029.1-202ENST00000606164 3651 ntBASIC6.12□□□□□ -1.43
HRH3Q9Y5N1 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC6.12□□□□□ -1.43
HRH3Q9Y5N1 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC6.12□□□□□ -1.43
HRH3Q9Y5N1 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC6.12□□□□□ -1.43
HRH3Q9Y5N1 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC6.12□□□□□ -1.43
HRH3Q9Y5N1 AL357559.1-201ENST00000622228 274 ntBASIC6.12□□□□□ -1.43
HRH3Q9Y5N1 PWAR1-201ENST00000624188 2414 ntBASIC6.12□□□□□ -1.43
HRH3Q9Y5N1 AC073488.9-201ENST00000631601 754 ntBASIC6.12□□□□□ -1.43
HRH3Q9Y5N1 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
HRH3Q9Y5N1 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
HRH3Q9Y5N1 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
HRH3Q9Y5N1 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
HRH3Q9Y5N1 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
HRH3Q9Y5N1 AL592148.3-201ENST00000608771 2646 ntBASIC6.12□□□□□ -1.43
HRH3Q9Y5N1 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC6.12□□□□□ -1.43
HRH3Q9Y5N1 VPS8-201ENST00000287546 5047 ntAPPRIS ALT1 TSL 1 (best) BASIC6.11□□□□□ -1.43
HRH3Q9Y5N1 AL138713.1-201ENST00000624026 2130 ntBASIC6.11□□□□□ -1.43
HRH3Q9Y5N1 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
HRH3Q9Y5N1 AL442128.2-201ENST00000620246 1824 ntBASIC6.11□□□□□ -1.43
HRH3Q9Y5N1 SELE-203ENST00000367775 3389 ntTSL 5 BASIC6.11□□□□□ -1.43
HRH3Q9Y5N1 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 137.9 ms