Protein–RNA interactions for Protein: Q9Y2Q9

MRPS28, 28S ribosomal protein S28, mitochondrial, humanhuman

Known RBP Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28Q9Y2Q9 MIR217-201ENST00000384817 110 ntBASIC3.79□□□□□ -1.8
MRPS28Q9Y2Q9 MIR16-1-201ENST00000385271 89 ntBASIC3.79□□□□□ -1.8
MRPS28Q9Y2Q9 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
MRPS28Q9Y2Q9 ATP5F1P3-201ENST00000397213 657 ntBASIC3.79□□□□□ -1.8
MRPS28Q9Y2Q9 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
MRPS28Q9Y2Q9 AL356131.1-201ENST00000405826 414 ntBASIC3.79□□□□□ -1.8
MRPS28Q9Y2Q9 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC3.79□□□□□ -1.8
MRPS28Q9Y2Q9 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
MRPS28Q9Y2Q9 RPL7P53-201ENST00000421245 739 ntBASIC3.79□□□□□ -1.8
MRPS28Q9Y2Q9 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC3.79□□□□□ -1.8
MRPS28Q9Y2Q9 AC011233.1-201ENST00000422812 283 ntBASIC3.79□□□□□ -1.8
MRPS28Q9Y2Q9 AC104837.2-201ENST00000427236 424 ntBASIC3.79□□□□□ -1.8
MRPS28Q9Y2Q9 AL365396.1-201ENST00000430854 671 ntBASIC3.79□□□□□ -1.8
MRPS28Q9Y2Q9 RPEP2-201ENST00000432149 701 ntBASIC3.79□□□□□ -1.8
MRPS28Q9Y2Q9 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC3.79□□□□□ -1.8
MRPS28Q9Y2Q9 UBE2V1P3-201ENST00000439651 417 ntBASIC3.79□□□□□ -1.8
MRPS28Q9Y2Q9 RPL23AP76-201ENST00000441860 458 ntBASIC3.79□□□□□ -1.8
MRPS28Q9Y2Q9 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC3.79□□□□□ -1.8
MRPS28Q9Y2Q9 AL606662.1-201ENST00000445763 553 ntBASIC3.79□□□□□ -1.8
MRPS28Q9Y2Q9 RPL23AP43-201ENST00000446445 471 ntBASIC3.79□□□□□ -1.8
MRPS28Q9Y2Q9 COX6CP18-201ENST00000448769 222 ntBASIC3.79□□□□□ -1.8
MRPS28Q9Y2Q9 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
MRPS28Q9Y2Q9 ZNF736P5Y-201ENST00000451173 805 ntBASIC3.79□□□□□ -1.8
MRPS28Q9Y2Q9 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
MRPS28Q9Y2Q9 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC3.79□□□□□ -1.8
MRPS28Q9Y2Q9 AC092324.1-201ENST00000468671 324 ntBASIC3.79□□□□□ -1.8
MRPS28Q9Y2Q9 CREM-226ENST00000469949 721 ntTSL 3 BASIC3.79□□□□□ -1.8
MRPS28Q9Y2Q9 S100A11P1-201ENST00000477525 312 ntBASIC3.79□□□□□ -1.8
MRPS28Q9Y2Q9 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC3.79□□□□□ -1.8
MRPS28Q9Y2Q9 AC111193.1-201ENST00000504097 155 ntBASIC3.79□□□□□ -1.8
MRPS28Q9Y2Q9 CDV3-208ENST00000511392 554 ntTSL 5 BASIC3.79□□□□□ -1.8
MRPS28Q9Y2Q9 AC093755.1-201ENST00000512950 1023 ntBASIC3.79□□□□□ -1.8
MRPS28Q9Y2Q9 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
MRPS28Q9Y2Q9 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC3.79□□□□□ -1.8
MRPS28Q9Y2Q9 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC3.79□□□□□ -1.8
MRPS28Q9Y2Q9 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC3.79□□□□□ -1.8
MRPS28Q9Y2Q9 MIR4458-201ENST00000578872 75 ntBASIC3.79□□□□□ -1.8
MRPS28Q9Y2Q9 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC3.79□□□□□ -1.8
MRPS28Q9Y2Q9 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC3.79□□□□□ -1.8
MRPS28Q9Y2Q9 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC3.79□□□□□ -1.8
MRPS28Q9Y2Q9 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC3.79□□□□□ -1.8
MRPS28Q9Y2Q9 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC3.79□□□□□ -1.8
MRPS28Q9Y2Q9 AC010857.1-201ENST00000606398 594 ntBASIC3.79□□□□□ -1.8
MRPS28Q9Y2Q9 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
MRPS28Q9Y2Q9 AC105227.2-201ENST00000615075 605 ntBASIC3.79□□□□□ -1.8
MRPS28Q9Y2Q9 AC006065.6-201ENST00000625201 545 ntBASIC3.79□□□□□ -1.8
MRPS28Q9Y2Q9 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC3.79□□□□□ -1.8
MRPS28Q9Y2Q9 ZNF663P-202ENST00000641770 1131 ntBASIC3.79□□□□□ -1.8
MRPS28Q9Y2Q9 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
MRPS28Q9Y2Q9 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC3.79□□□□□ -1.8
MRPS28Q9Y2Q9 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
MRPS28Q9Y2Q9 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC3.79□□□□□ -1.8
MRPS28Q9Y2Q9 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
MRPS28Q9Y2Q9 SGO1P1-201ENST00000603525 1447 ntBASIC3.78□□□□□ -1.8
MRPS28Q9Y2Q9 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
MRPS28Q9Y2Q9 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
MRPS28Q9Y2Q9 AL133412.1-201ENST00000380194 2992 ntBASIC3.78□□□□□ -1.8
MRPS28Q9Y2Q9 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
MRPS28Q9Y2Q9 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
MRPS28Q9Y2Q9 AC090229.1-201ENST00000590983 1609 ntBASIC3.78□□□□□ -1.8
MRPS28Q9Y2Q9 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
MRPS28Q9Y2Q9 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
MRPS28Q9Y2Q9 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
MRPS28Q9Y2Q9 MIR937-201ENST00000401271 86 ntBASIC3.78□□□□□ -1.8
MRPS28Q9Y2Q9 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC3.78□□□□□ -1.8
MRPS28Q9Y2Q9 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC3.78□□□□□ -1.8
MRPS28Q9Y2Q9 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC3.78□□□□□ -1.8
MRPS28Q9Y2Q9 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC3.78□□□□□ -1.8
MRPS28Q9Y2Q9 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC3.78□□□□□ -1.8
MRPS28Q9Y2Q9 PAICSP7-201ENST00000419829 962 ntBASIC3.78□□□□□ -1.8
MRPS28Q9Y2Q9 MFSD13B-201ENST00000420133 1290 ntBASIC3.78□□□□□ -1.8
MRPS28Q9Y2Q9 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC3.78□□□□□ -1.8
MRPS28Q9Y2Q9 AC007435.1-201ENST00000421086 415 ntBASIC3.78□□□□□ -1.8
MRPS28Q9Y2Q9 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC3.78□□□□□ -1.8
MRPS28Q9Y2Q9 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC3.78□□□□□ -1.8
MRPS28Q9Y2Q9 AL390023.1-201ENST00000428836 262 ntBASIC3.78□□□□□ -1.8
MRPS28Q9Y2Q9 CNOT7P1-201ENST00000429006 852 ntBASIC3.78□□□□□ -1.8
MRPS28Q9Y2Q9 UBE2V1P1-201ENST00000430836 445 ntBASIC3.78□□□□□ -1.8
MRPS28Q9Y2Q9 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC3.78□□□□□ -1.8
MRPS28Q9Y2Q9 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC3.78□□□□□ -1.8
MRPS28Q9Y2Q9 PSMD10P3-201ENST00000437000 448 ntBASIC3.78□□□□□ -1.8
MRPS28Q9Y2Q9 AL117351.1-201ENST00000438864 766 ntBASIC3.78□□□□□ -1.8
MRPS28Q9Y2Q9 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC3.78□□□□□ -1.8
MRPS28Q9Y2Q9 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC3.78□□□□□ -1.8
MRPS28Q9Y2Q9 YWHAQP9-201ENST00000445891 512 ntBASIC3.78□□□□□ -1.8
MRPS28Q9Y2Q9 EEF1A1P1-201ENST00000447052 739 ntBASIC3.78□□□□□ -1.8
MRPS28Q9Y2Q9 ABCF2P2-201ENST00000450549 296 ntBASIC3.78□□□□□ -1.8
MRPS28Q9Y2Q9 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC3.78□□□□□ -1.8
MRPS28Q9Y2Q9 TPTE2P5-203ENST00000458118 728 ntBASIC3.78□□□□□ -1.8
MRPS28Q9Y2Q9 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC3.78□□□□□ -1.8
MRPS28Q9Y2Q9 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC3.78□□□□□ -1.8
MRPS28Q9Y2Q9 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC3.78□□□□□ -1.8
MRPS28Q9Y2Q9 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC3.78□□□□□ -1.8
MRPS28Q9Y2Q9 AP003461.1-201ENST00000528866 78 ntBASIC3.78□□□□□ -1.8
MRPS28Q9Y2Q9 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC3.78□□□□□ -1.8
MRPS28Q9Y2Q9 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC3.78□□□□□ -1.8
MRPS28Q9Y2Q9 AC069240.1-201ENST00000548774 375 ntBASIC3.78□□□□□ -1.8
MRPS28Q9Y2Q9 AC010198.2-201ENST00000550612 259 ntBASIC3.78□□□□□ -1.8
MRPS28Q9Y2Q9 AC008015.1-201ENST00000555505 465 ntBASIC3.78□□□□□ -1.8
MRPS28Q9Y2Q9 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms