Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 RN7SKP55-201ENST00000364888 307 ntBASIC6.97□□□□□ -1.29
VPS9D1Q9Y2B5 REG1CP-201ENST00000377435 1705 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
VPS9D1Q9Y2B5 RNU6-434P-201ENST00000384376 107 ntBASIC6.97□□□□□ -1.29
VPS9D1Q9Y2B5 MIR640-201ENST00000385086 96 ntBASIC6.97□□□□□ -1.29
VPS9D1Q9Y2B5 U3.39-201ENST00000408569 239 ntBASIC6.97□□□□□ -1.29
VPS9D1Q9Y2B5 RN7SKP271-201ENST00000410528 320 ntBASIC6.97□□□□□ -1.29
VPS9D1Q9Y2B5 RN7SKP296-201ENST00000411185 341 ntBASIC6.97□□□□□ -1.29
VPS9D1Q9Y2B5 RPL19P1-201ENST00000411635 428 ntBASIC6.97□□□□□ -1.29
VPS9D1Q9Y2B5 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC6.97□□□□□ -1.29
VPS9D1Q9Y2B5 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC6.97□□□□□ -1.29
VPS9D1Q9Y2B5 GAPDHP57-201ENST00000424400 585 ntBASIC6.97□□□□□ -1.29
VPS9D1Q9Y2B5 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
VPS9D1Q9Y2B5 OR1M1-201ENST00000429566 1035 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
VPS9D1Q9Y2B5 AL590233.1-201ENST00000430017 456 ntBASIC6.97□□□□□ -1.29
VPS9D1Q9Y2B5 CR391992.1-201ENST00000438601 394 ntBASIC6.97□□□□□ -1.29
VPS9D1Q9Y2B5 AC108463.2-201ENST00000451230 412 ntTSL 5 BASIC6.97□□□□□ -1.29
VPS9D1Q9Y2B5 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC6.97□□□□□ -1.29
VPS9D1Q9Y2B5 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC6.97□□□□□ -1.29
VPS9D1Q9Y2B5 AC005229.2-201ENST00000456995 399 ntBASIC6.97□□□□□ -1.29
VPS9D1Q9Y2B5 RPLP0P1-201ENST00000457002 361 ntBASIC6.97□□□□□ -1.29
VPS9D1Q9Y2B5 COX6CP14-201ENST00000469580 174 ntBASIC6.97□□□□□ -1.29
VPS9D1Q9Y2B5 KCNMB3P1-202ENST00000493696 3389 ntBASIC6.97□□□□□ -1.29
VPS9D1Q9Y2B5 RPL7P47-201ENST00000497299 556 ntBASIC6.97□□□□□ -1.29
VPS9D1Q9Y2B5 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC6.97□□□□□ -1.29
VPS9D1Q9Y2B5 MRPL57P6-201ENST00000506570 309 ntBASIC6.97□□□□□ -1.29
VPS9D1Q9Y2B5 AL359273.1-201ENST00000510918 627 ntBASIC6.97□□□□□ -1.29
VPS9D1Q9Y2B5 AC092436.3-201ENST00000511788 257 ntBASIC6.97□□□□□ -1.29
VPS9D1Q9Y2B5 SCARNA24.2-201ENST00000516968 130 ntBASIC6.97□□□□□ -1.29
VPS9D1Q9Y2B5 RN7SKP233-201ENST00000517005 110 ntBASIC6.97□□□□□ -1.29
VPS9D1Q9Y2B5 C14orf159-213ENST00000519019 834 ntTSL 3 BASIC6.97□□□□□ -1.29
VPS9D1Q9Y2B5 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC6.97□□□□□ -1.29
VPS9D1Q9Y2B5 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC6.97□□□□□ -1.29
VPS9D1Q9Y2B5 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC6.97□□□□□ -1.29
VPS9D1Q9Y2B5 FXNP1-201ENST00000555153 337 ntBASIC6.97□□□□□ -1.29
VPS9D1Q9Y2B5 AL121576.1-201ENST00000556055 276 ntBASIC6.97□□□□□ -1.29
VPS9D1Q9Y2B5 AC024614.1-201ENST00000577546 307 ntBASIC6.97□□□□□ -1.29
VPS9D1Q9Y2B5 SNORD39.2-201ENST00000579995 76 ntBASIC6.97□□□□□ -1.29
VPS9D1Q9Y2B5 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC6.97□□□□□ -1.29
VPS9D1Q9Y2B5 AC005070.2-201ENST00000604391 260 ntBASIC6.97□□□□□ -1.29
VPS9D1Q9Y2B5 AC009779.8-202ENST00000607990 932 ntBASIC6.97□□□□□ -1.29
VPS9D1Q9Y2B5 AL359547.2-201ENST00000615810 418 ntBASIC6.97□□□□□ -1.29
VPS9D1Q9Y2B5 AC034229.6-201ENST00000623704 224 ntBASIC6.97□□□□□ -1.29
VPS9D1Q9Y2B5 FKBP1AP4-201ENST00000631775 336 ntBASIC6.97□□□□□ -1.29
VPS9D1Q9Y2B5 ENSA-215ENST00000638926 360 ntTSL 5 BASIC6.97□□□□□ -1.29
VPS9D1Q9Y2B5 JPX-212ENST00000639185 9658 ntTSL 5 BASIC6.97□□□□□ -1.29
VPS9D1Q9Y2B5 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
VPS9D1Q9Y2B5 INTS12-202ENST00000394735 1927 ntTSL 5 BASIC6.97□□□□□ -1.29
VPS9D1Q9Y2B5 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
VPS9D1Q9Y2B5 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
VPS9D1Q9Y2B5 FNDC7-201ENST00000370017 3332 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
VPS9D1Q9Y2B5 AC087430.1-201ENST00000451707 3699 ntTSL 2 BASIC6.97□□□□□ -1.29
VPS9D1Q9Y2B5 NLRP13-202ENST00000588751 3533 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
VPS9D1Q9Y2B5 LRP2BP-203ENST00000510776 3055 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
VPS9D1Q9Y2B5 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC6.97□□□□□ -1.29
VPS9D1Q9Y2B5 LINC01492-201ENST00000411575 3738 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
VPS9D1Q9Y2B5 DYDC2-201ENST00000256039 1842 ntAPPRIS P3 TSL 2 BASIC6.97□□□□□ -1.29
VPS9D1Q9Y2B5 KIAA0391-203ENST00000534898 2611 ntAPPRIS P3 TSL 1 (best) BASIC6.97□□□□□ -1.29
VPS9D1Q9Y2B5 AC129502.1-201ENST00000623261 1654 ntBASIC6.96□□□□□ -1.29
VPS9D1Q9Y2B5 ZNF761-202ENST00000432094 4061 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
VPS9D1Q9Y2B5 TRIM51GP-201ENST00000534741 1350 ntBASIC6.96□□□□□ -1.29
VPS9D1Q9Y2B5 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
VPS9D1Q9Y2B5 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
VPS9D1Q9Y2B5 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
VPS9D1Q9Y2B5 AC133552.3-201ENST00000572236 1869 ntBASIC6.96□□□□□ -1.29
VPS9D1Q9Y2B5 MAGT1-201ENST00000358075 4047 ntAPPRIS P2 TSL 1 (best) BASIC6.96□□□□□ -1.29
VPS9D1Q9Y2B5 BX322639.1-202ENST00000423987 2213 ntBASIC6.96□□□□□ -1.29
VPS9D1Q9Y2B5 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC6.96□□□□□ -1.3
VPS9D1Q9Y2B5 NPHP1-203ENST00000393272 2752 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
VPS9D1Q9Y2B5 REST-201ENST00000309042 7300 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
VPS9D1Q9Y2B5 RNU1-24P-201ENST00000364285 165 ntBASIC6.96□□□□□ -1.3
VPS9D1Q9Y2B5 Y_RNA.240-201ENST00000364469 95 ntBASIC6.96□□□□□ -1.3
VPS9D1Q9Y2B5 Y_RNA.273-201ENST00000364703 102 ntBASIC6.96□□□□□ -1.3
VPS9D1Q9Y2B5 RNU6-596P-201ENST00000365395 98 ntBASIC6.96□□□□□ -1.3
VPS9D1Q9Y2B5 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
VPS9D1Q9Y2B5 AL023807.1-201ENST00000407932 359 ntBASIC6.96□□□□□ -1.3
VPS9D1Q9Y2B5 RNA5SP177-201ENST00000410122 107 ntBASIC6.96□□□□□ -1.3
VPS9D1Q9Y2B5 RNU6-174P-201ENST00000410406 106 ntBASIC6.96□□□□□ -1.3
VPS9D1Q9Y2B5 AC009229.2-201ENST00000417213 351 ntTSL 3 BASIC6.96□□□□□ -1.3
VPS9D1Q9Y2B5 UBE2V1P4-201ENST00000425374 344 ntBASIC6.96□□□□□ -1.3
VPS9D1Q9Y2B5 AL390119.1-201ENST00000440329 312 ntBASIC6.96□□□□□ -1.3
VPS9D1Q9Y2B5 RPS19P6-201ENST00000441327 433 ntBASIC6.96□□□□□ -1.3
VPS9D1Q9Y2B5 AC016696.1-201ENST00000446949 318 ntBASIC6.96□□□□□ -1.3
VPS9D1Q9Y2B5 AL513124.1-201ENST00000450410 614 ntBASIC6.96□□□□□ -1.3
VPS9D1Q9Y2B5 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC6.96□□□□□ -1.3
VPS9D1Q9Y2B5 RN7SL705P-201ENST00000481678 294 ntBASIC6.96□□□□□ -1.3
VPS9D1Q9Y2B5 SNX18P24-201ENST00000505249 671 ntBASIC6.96□□□□□ -1.3
VPS9D1Q9Y2B5 MRPL49P1-201ENST00000505951 535 ntBASIC6.96□□□□□ -1.3
VPS9D1Q9Y2B5 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC6.96□□□□□ -1.3
VPS9D1Q9Y2B5 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC6.96□□□□□ -1.3
VPS9D1Q9Y2B5 RNU6-685P-201ENST00000517088 95 ntBASIC6.96□□□□□ -1.3
VPS9D1Q9Y2B5 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC6.96□□□□□ -1.3
VPS9D1Q9Y2B5 IGHVII-60-1-201ENST00000519079 256 ntBASIC6.96□□□□□ -1.3
VPS9D1Q9Y2B5 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC6.96□□□□□ -1.3
VPS9D1Q9Y2B5 AC011611.6-201ENST00000547483 255 ntBASIC6.96□□□□□ -1.3
VPS9D1Q9Y2B5 SULT1C2P2-201ENST00000562517 294 ntBASIC6.96□□□□□ -1.3
VPS9D1Q9Y2B5 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC6.96□□□□□ -1.3
VPS9D1Q9Y2B5 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC6.96□□□□□ -1.3
VPS9D1Q9Y2B5 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC6.96□□□□□ -1.3
VPS9D1Q9Y2B5 AL138889.2-201ENST00000603883 242 ntBASIC6.96□□□□□ -1.3
VPS9D1Q9Y2B5 ELMO2P1-201ENST00000611569 473 ntTSL 5 BASIC6.96□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms