Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC4.47□□□□□ -1.69
CLIP2Q9UDT6 AC087272.1-201ENST00000523624 533 ntBASIC4.47□□□□□ -1.69
CLIP2Q9UDT6 OR4C2P-201ENST00000530855 1064 ntBASIC4.47□□□□□ -1.69
CLIP2Q9UDT6 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC4.47□□□□□ -1.69
CLIP2Q9UDT6 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC4.47□□□□□ -1.69
CLIP2Q9UDT6 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC4.47□□□□□ -1.69
CLIP2Q9UDT6 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC4.47□□□□□ -1.69
CLIP2Q9UDT6 EIF1P6-201ENST00000600054 334 ntBASIC4.47□□□□□ -1.69
CLIP2Q9UDT6 SUMO2P14-201ENST00000604488 293 ntBASIC4.47□□□□□ -1.69
CLIP2Q9UDT6 AC005972.3-201ENST00000606304 481 ntBASIC4.47□□□□□ -1.69
CLIP2Q9UDT6 AL391497.1-201ENST00000608671 547 ntBASIC4.47□□□□□ -1.69
CLIP2Q9UDT6 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC4.47□□□□□ -1.69
CLIP2Q9UDT6 AL356490.1-201ENST00000623079 479 ntBASIC4.47□□□□□ -1.69
CLIP2Q9UDT6 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CLIP2Q9UDT6 AC024560.2-201ENST00000507981 1497 ntBASIC4.47□□□□□ -1.69
CLIP2Q9UDT6 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
CLIP2Q9UDT6 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
CLIP2Q9UDT6 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC4.46□□□□□ -1.7
CLIP2Q9UDT6 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CLIP2Q9UDT6 RNF6P1-201ENST00000444889 1784 ntBASIC4.46□□□□□ -1.7
CLIP2Q9UDT6 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC4.46□□□□□ -1.7
CLIP2Q9UDT6 AC066616.2-201ENST00000559334 1481 ntBASIC4.46□□□□□ -1.7
CLIP2Q9UDT6 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CLIP2Q9UDT6 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC4.46□□□□□ -1.7
CLIP2Q9UDT6 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
CLIP2Q9UDT6 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CLIP2Q9UDT6 Z98941.1-201ENST00000407764 100 ntBASIC4.46□□□□□ -1.7
CLIP2Q9UDT6 RHEBP3-201ENST00000411920 351 ntBASIC4.46□□□□□ -1.7
CLIP2Q9UDT6 MTND4P11-201ENST00000417020 1058 ntBASIC4.46□□□□□ -1.7
CLIP2Q9UDT6 RPL37P1-201ENST00000432310 284 ntBASIC4.46□□□□□ -1.7
CLIP2Q9UDT6 AL031663.1-201ENST00000437445 219 ntBASIC4.46□□□□□ -1.7
CLIP2Q9UDT6 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC4.46□□□□□ -1.7
CLIP2Q9UDT6 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC4.46□□□□□ -1.7
CLIP2Q9UDT6 AL049829.1-201ENST00000465411 156 ntBASIC4.46□□□□□ -1.7
CLIP2Q9UDT6 CABYRP1-201ENST00000465493 1045 ntBASIC4.46□□□□□ -1.7
CLIP2Q9UDT6 AC010307.1-201ENST00000467206 836 ntBASIC4.46□□□□□ -1.7
CLIP2Q9UDT6 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC4.46□□□□□ -1.7
CLIP2Q9UDT6 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC4.46□□□□□ -1.7
CLIP2Q9UDT6 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC4.46□□□□□ -1.7
CLIP2Q9UDT6 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC4.46□□□□□ -1.7
CLIP2Q9UDT6 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC4.46□□□□□ -1.7
CLIP2Q9UDT6 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC4.46□□□□□ -1.7
CLIP2Q9UDT6 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC4.46□□□□□ -1.7
CLIP2Q9UDT6 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC4.46□□□□□ -1.7
CLIP2Q9UDT6 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CLIP2Q9UDT6 AL731537.2-201ENST00000561565 951 ntBASIC4.46□□□□□ -1.7
CLIP2Q9UDT6 BNIP3P33-201ENST00000598912 569 ntBASIC4.46□□□□□ -1.7
CLIP2Q9UDT6 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.46□□□□□ -1.7
CLIP2Q9UDT6 AL118556.2-201ENST00000614375 824 ntBASIC4.46□□□□□ -1.7
CLIP2Q9UDT6 AC015726.3-201ENST00000624501 418 ntBASIC4.46□□□□□ -1.7
CLIP2Q9UDT6 MAPK10-372ENST00000641954 3413 ntBASIC4.46□□□□□ -1.7
CLIP2Q9UDT6 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
CLIP2Q9UDT6 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.46□□□□□ -1.7
CLIP2Q9UDT6 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CLIP2Q9UDT6 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CLIP2Q9UDT6 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.45□□□□□ -1.7
CLIP2Q9UDT6 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
CLIP2Q9UDT6 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CLIP2Q9UDT6 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CLIP2Q9UDT6 AC025125.1-201ENST00000624743 1922 ntBASIC4.45□□□□□ -1.7
CLIP2Q9UDT6 MAPK10-373ENST00000641983 6772 ntBASIC4.45□□□□□ -1.7
CLIP2Q9UDT6 RAD1P1-201ENST00000231383 813 ntBASIC4.45□□□□□ -1.7
CLIP2Q9UDT6 ATP5F1P4-201ENST00000397288 746 ntBASIC4.45□□□□□ -1.7
CLIP2Q9UDT6 RPL21P17-201ENST00000397467 475 ntBASIC4.45□□□□□ -1.7
CLIP2Q9UDT6 AL365396.1-201ENST00000430854 671 ntBASIC4.45□□□□□ -1.7
CLIP2Q9UDT6 MED6P1-201ENST00000439659 713 ntBASIC4.45□□□□□ -1.7
CLIP2Q9UDT6 AC092809.1-201ENST00000441469 474 ntBASIC4.45□□□□□ -1.7
CLIP2Q9UDT6 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
CLIP2Q9UDT6 UBE2CP3-201ENST00000502715 450 ntBASIC4.45□□□□□ -1.7
CLIP2Q9UDT6 AC108941.1-201ENST00000502853 530 ntBASIC4.45□□□□□ -1.7
CLIP2Q9UDT6 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC4.45□□□□□ -1.7
CLIP2Q9UDT6 USP9YP5-201ENST00000511770 630 ntBASIC4.45□□□□□ -1.7
CLIP2Q9UDT6 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC4.45□□□□□ -1.7
CLIP2Q9UDT6 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
CLIP2Q9UDT6 AGGF1P8-201ENST00000562979 1000 ntBASIC4.45□□□□□ -1.7
CLIP2Q9UDT6 AC053481.3-201ENST00000577881 843 ntBASIC4.45□□□□□ -1.7
CLIP2Q9UDT6 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC4.45□□□□□ -1.7
CLIP2Q9UDT6 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC4.45□□□□□ -1.7
CLIP2Q9UDT6 MIR5187-201ENST00000583479 76 ntBASIC4.45□□□□□ -1.7
CLIP2Q9UDT6 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CLIP2Q9UDT6 AC244505.7-201ENST00000599675 272 ntBASIC4.45□□□□□ -1.7
CLIP2Q9UDT6 AL049634.3-201ENST00000604968 457 ntBASIC4.45□□□□□ -1.7
CLIP2Q9UDT6 AC004775.1-201ENST00000607389 753 ntBASIC4.45□□□□□ -1.7
CLIP2Q9UDT6 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC4.45□□□□□ -1.7
CLIP2Q9UDT6 AC244205.2-202ENST00000635781 342 ntBASIC4.45□□□□□ -1.7
CLIP2Q9UDT6 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.45□□□□□ -1.7
CLIP2Q9UDT6 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CLIP2Q9UDT6 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC4.45□□□□□ -1.7
CLIP2Q9UDT6 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.45□□□□□ -1.7
CLIP2Q9UDT6 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CLIP2Q9UDT6 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CLIP2Q9UDT6 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CLIP2Q9UDT6 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CLIP2Q9UDT6 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.44□□□□□ -1.7
CLIP2Q9UDT6 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CLIP2Q9UDT6 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CLIP2Q9UDT6 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CLIP2Q9UDT6 SNORA5A-201ENST00000384111 134 ntBASIC4.44□□□□□ -1.7
CLIP2Q9UDT6 AC010385.1-201ENST00000412374 256 ntBASIC4.44□□□□□ -1.7
CLIP2Q9UDT6 AL035423.1-201ENST00000420331 213 ntBASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 123.1 ms