Protein–RNA interactions for Protein: Q9NPC3

CCNB1IP1, E3 ubiquitin-protein ligase CCNB1IP1, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB1IP1Q9NPC3 SNORA31-201ENST00000362607 130 ntBASIC3.53□□□□□ -1.84
CCNB1IP1Q9NPC3 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC3.53□□□□□ -1.84
CCNB1IP1Q9NPC3 HMGB1P10-201ENST00000395823 563 ntBASIC3.53□□□□□ -1.84
CCNB1IP1Q9NPC3 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.53□□□□□ -1.84
CCNB1IP1Q9NPC3 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC3.53□□□□□ -1.84
CCNB1IP1Q9NPC3 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CCNB1IP1Q9NPC3 RPL37P1-201ENST00000432310 284 ntBASIC3.53□□□□□ -1.84
CCNB1IP1Q9NPC3 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.53□□□□□ -1.84
CCNB1IP1Q9NPC3 RPL23AP33-201ENST00000442301 452 ntBASIC3.53□□□□□ -1.84
CCNB1IP1Q9NPC3 AC092685.1-201ENST00000447960 1243 ntBASIC3.53□□□□□ -1.84
CCNB1IP1Q9NPC3 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC3.53□□□□□ -1.84
CCNB1IP1Q9NPC3 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CCNB1IP1Q9NPC3 AC006539.3-201ENST00000454258 129 ntBASIC3.53□□□□□ -1.84
CCNB1IP1Q9NPC3 snoU13.7-201ENST00000459220 104 ntBASIC3.53□□□□□ -1.84
CCNB1IP1Q9NPC3 RPS7P7-201ENST00000463499 571 ntBASIC3.53□□□□□ -1.84
CCNB1IP1Q9NPC3 RPL7P19-201ENST00000469948 618 ntBASIC3.53□□□□□ -1.84
CCNB1IP1Q9NPC3 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.53□□□□□ -1.84
CCNB1IP1Q9NPC3 AC110792.1-201ENST00000491826 472 ntBASIC3.53□□□□□ -1.84
CCNB1IP1Q9NPC3 UBE2CP3-201ENST00000502715 450 ntBASIC3.53□□□□□ -1.84
CCNB1IP1Q9NPC3 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC3.53□□□□□ -1.84
CCNB1IP1Q9NPC3 SOD1P3-201ENST00000518682 454 ntBASIC3.53□□□□□ -1.84
CCNB1IP1Q9NPC3 IGKV2-23-201ENST00000518729 323 ntBASIC3.53□□□□□ -1.84
CCNB1IP1Q9NPC3 LY96-202ENST00000518893 430 ntTSL 3 BASIC3.53□□□□□ -1.84
CCNB1IP1Q9NPC3 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC3.53□□□□□ -1.84
CCNB1IP1Q9NPC3 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC3.53□□□□□ -1.84
CCNB1IP1Q9NPC3 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC3.53□□□□□ -1.84
CCNB1IP1Q9NPC3 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC3.53□□□□□ -1.84
CCNB1IP1Q9NPC3 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC3.53□□□□□ -1.84
CCNB1IP1Q9NPC3 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC3.53□□□□□ -1.84
CCNB1IP1Q9NPC3 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC3.53□□□□□ -1.84
CCNB1IP1Q9NPC3 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.53□□□□□ -1.84
CCNB1IP1Q9NPC3 AC015849.2-201ENST00000605738 409 ntBASIC3.53□□□□□ -1.84
CCNB1IP1Q9NPC3 MIR7151-201ENST00000617477 60 ntBASIC3.53□□□□□ -1.84
CCNB1IP1Q9NPC3 AC112484.5-201ENST00000624189 228 ntBASIC3.53□□□□□ -1.84
CCNB1IP1Q9NPC3 U6.107-201ENST00000637108 79 ntBASIC3.53□□□□□ -1.84
CCNB1IP1Q9NPC3 RIOK3P1-201ENST00000418778 1528 ntBASIC3.53□□□□□ -1.84
CCNB1IP1Q9NPC3 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.53□□□□□ -1.84
CCNB1IP1Q9NPC3 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CCNB1IP1Q9NPC3 AP001148.1-201ENST00000624124 2359 ntBASIC3.53□□□□□ -1.84
CCNB1IP1Q9NPC3 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CCNB1IP1Q9NPC3 OTUD4P1-201ENST00000237841 3067 ntBASIC3.52□□□□□ -1.85
CCNB1IP1Q9NPC3 AC009501.3-201ENST00000605001 1352 ntBASIC3.52□□□□□ -1.85
CCNB1IP1Q9NPC3 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CCNB1IP1Q9NPC3 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC3.52□□□□□ -1.85
CCNB1IP1Q9NPC3 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CCNB1IP1Q9NPC3 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.52□□□□□ -1.85
CCNB1IP1Q9NPC3 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CCNB1IP1Q9NPC3 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CCNB1IP1Q9NPC3 AC011978.2-201ENST00000569835 2054 ntBASIC3.52□□□□□ -1.85
CCNB1IP1Q9NPC3 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.52□□□□□ -1.85
CCNB1IP1Q9NPC3 AC126755.2-208ENST00000327792 462 ntBASIC3.52□□□□□ -1.85
CCNB1IP1Q9NPC3 AC138969.1-213ENST00000331436 462 ntBASIC3.52□□□□□ -1.85
CCNB1IP1Q9NPC3 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.52□□□□□ -1.85
CCNB1IP1Q9NPC3 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.52□□□□□ -1.85
CCNB1IP1Q9NPC3 PTMAP5-201ENST00000393073 333 ntBASIC3.52□□□□□ -1.85
CCNB1IP1Q9NPC3 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC3.52□□□□□ -1.85
CCNB1IP1Q9NPC3 HSPE1P26-201ENST00000405341 275 ntBASIC3.52□□□□□ -1.85
CCNB1IP1Q9NPC3 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CCNB1IP1Q9NPC3 Y_RNA.625-201ENST00000411256 107 ntBASIC3.52□□□□□ -1.85
CCNB1IP1Q9NPC3 AL691449.1-201ENST00000426570 421 ntBASIC3.52□□□□□ -1.85
CCNB1IP1Q9NPC3 EIF2S2P3-201ENST00000428356 999 ntBASIC3.52□□□□□ -1.85
CCNB1IP1Q9NPC3 ZNF965P-201ENST00000432501 817 ntBASIC3.52□□□□□ -1.85
CCNB1IP1Q9NPC3 CYCSP43-201ENST00000438233 310 ntBASIC3.52□□□□□ -1.85
CCNB1IP1Q9NPC3 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.52□□□□□ -1.85
CCNB1IP1Q9NPC3 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.52□□□□□ -1.85
CCNB1IP1Q9NPC3 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC3.52□□□□□ -1.85
CCNB1IP1Q9NPC3 AC069540.1-201ENST00000446320 988 ntBASIC3.52□□□□□ -1.85
CCNB1IP1Q9NPC3 AC114755.5-201ENST00000447760 831 ntBASIC3.52□□□□□ -1.85
CCNB1IP1Q9NPC3 BX276092.4-201ENST00000452056 248 ntBASIC3.52□□□□□ -1.85
CCNB1IP1Q9NPC3 AC007537.2-201ENST00000472093 511 ntBASIC3.52□□□□□ -1.85
CCNB1IP1Q9NPC3 TRBV8-2-201ENST00000475637 270 ntBASIC3.52□□□□□ -1.85
CCNB1IP1Q9NPC3 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CCNB1IP1Q9NPC3 PCBP2P3-201ENST00000509726 843 ntBASIC3.52□□□□□ -1.85
CCNB1IP1Q9NPC3 AC093755.1-201ENST00000512950 1023 ntBASIC3.52□□□□□ -1.85
CCNB1IP1Q9NPC3 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC3.52□□□□□ -1.85
CCNB1IP1Q9NPC3 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.52□□□□□ -1.85
CCNB1IP1Q9NPC3 OR5AK3P-201ENST00000527486 1297 ntBASIC3.52□□□□□ -1.85
CCNB1IP1Q9NPC3 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CCNB1IP1Q9NPC3 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC3.52□□□□□ -1.85
CCNB1IP1Q9NPC3 AC091516.1-201ENST00000549191 703 ntBASIC3.52□□□□□ -1.85
CCNB1IP1Q9NPC3 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC3.52□□□□□ -1.85
CCNB1IP1Q9NPC3 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC3.52□□□□□ -1.85
CCNB1IP1Q9NPC3 RN7SL600P-201ENST00000581811 299 ntBASIC3.52□□□□□ -1.85
CCNB1IP1Q9NPC3 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.52□□□□□ -1.85
CCNB1IP1Q9NPC3 AC011492.1-201ENST00000600023 315 ntBASIC3.52□□□□□ -1.85
CCNB1IP1Q9NPC3 AL137849.1-201ENST00000604767 169 ntBASIC3.52□□□□□ -1.85
CCNB1IP1Q9NPC3 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.52□□□□□ -1.85
CCNB1IP1Q9NPC3 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CCNB1IP1Q9NPC3 OR52H1-202ENST00000641796 1061 ntBASIC3.52□□□□□ -1.85
CCNB1IP1Q9NPC3 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.52□□□□□ -1.85
CCNB1IP1Q9NPC3 AC026951.1-201ENST00000559530 2459 ntBASIC3.52□□□□□ -1.85
CCNB1IP1Q9NPC3 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CCNB1IP1Q9NPC3 CASC19-261ENST00000641853 1638 ntBASIC3.52□□□□□ -1.85
CCNB1IP1Q9NPC3 AC010733.2-201ENST00000589496 5702 ntBASIC3.51□□□□□ -1.85
CCNB1IP1Q9NPC3 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CCNB1IP1Q9NPC3 MTCO1P24-201ENST00000515438 1558 ntBASIC3.51□□□□□ -1.85
CCNB1IP1Q9NPC3 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CCNB1IP1Q9NPC3 AL121657.1-201ENST00000327215 531 ntBASIC3.51□□□□□ -1.85
CCNB1IP1Q9NPC3 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CCNB1IP1Q9NPC3 RNA5SP443-201ENST00000363083 132 ntBASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms