Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.03□□□□□ -1.92
KIAA1549Q9HCM3 RNU6-283P-201ENST00000364788 107 ntBASIC3.03□□□□□ -1.92
KIAA1549Q9HCM3 MIR483-201ENST00000385070 76 ntBASIC3.03□□□□□ -1.92
KIAA1549Q9HCM3 BX842559.1-201ENST00000419615 532 ntBASIC3.03□□□□□ -1.92
KIAA1549Q9HCM3 AL512649.1-201ENST00000428997 581 ntBASIC3.03□□□□□ -1.92
KIAA1549Q9HCM3 AC006445.1-201ENST00000491925 405 ntBASIC3.03□□□□□ -1.92
KIAA1549Q9HCM3 RPL7P47-201ENST00000497299 556 ntBASIC3.03□□□□□ -1.92
KIAA1549Q9HCM3 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC3.03□□□□□ -1.92
KIAA1549Q9HCM3 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.03□□□□□ -1.92
KIAA1549Q9HCM3 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC3.03□□□□□ -1.92
KIAA1549Q9HCM3 UBE2NP1-201ENST00000545592 458 ntBASIC3.03□□□□□ -1.92
KIAA1549Q9HCM3 SNORD39.2-201ENST00000579995 76 ntBASIC3.03□□□□□ -1.92
KIAA1549Q9HCM3 AL033523.1-201ENST00000605153 153 ntBASIC3.03□□□□□ -1.92
KIAA1549Q9HCM3 MIR7112-201ENST00000616126 65 ntBASIC3.03□□□□□ -1.92
KIAA1549Q9HCM3 CUL4AP1-201ENST00000514750 1863 ntBASIC3.03□□□□□ -1.92
KIAA1549Q9HCM3 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
KIAA1549Q9HCM3 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
KIAA1549Q9HCM3 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
KIAA1549Q9HCM3 AC017071.1-201ENST00000564407 2204 ntBASIC3.03□□□□□ -1.92
KIAA1549Q9HCM3 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
KIAA1549Q9HCM3 AC104297.1-201ENST00000393779 870 ntBASIC3.03□□□□□ -1.92
KIAA1549Q9HCM3 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC3.03□□□□□ -1.92
KIAA1549Q9HCM3 NDUFB4P4-201ENST00000404822 243 ntBASIC3.03□□□□□ -1.92
KIAA1549Q9HCM3 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.03□□□□□ -1.92
KIAA1549Q9HCM3 MRPS31P2-201ENST00000451581 518 ntBASIC3.03□□□□□ -1.92
KIAA1549Q9HCM3 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC3.03□□□□□ -1.92
KIAA1549Q9HCM3 RPL23AP73-201ENST00000492507 471 ntBASIC3.03□□□□□ -1.92
KIAA1549Q9HCM3 HMGB3P14-201ENST00000494195 599 ntBASIC3.03□□□□□ -1.92
KIAA1549Q9HCM3 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC3.03□□□□□ -1.92
KIAA1549Q9HCM3 MTHFD2P4-201ENST00000515074 1025 ntBASIC3.03□□□□□ -1.92
KIAA1549Q9HCM3 RNA5SP217-201ENST00000515959 91 ntBASIC3.03□□□□□ -1.92
KIAA1549Q9HCM3 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.03□□□□□ -1.92
KIAA1549Q9HCM3 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.03□□□□□ -1.92
KIAA1549Q9HCM3 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.03□□□□□ -1.92
KIAA1549Q9HCM3 HIGD1AP1-201ENST00000550979 275 ntBASIC3.03□□□□□ -1.92
KIAA1549Q9HCM3 GTF2IP8-201ENST00000560687 584 ntBASIC3.03□□□□□ -1.92
KIAA1549Q9HCM3 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.03□□□□□ -1.92
KIAA1549Q9HCM3 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.03□□□□□ -1.92
KIAA1549Q9HCM3 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.93
KIAA1549Q9HCM3 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
KIAA1549Q9HCM3 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
KIAA1549Q9HCM3 MTND4P10-201ENST00000446199 1363 ntBASIC3.02□□□□□ -1.93
KIAA1549Q9HCM3 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
KIAA1549Q9HCM3 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
KIAA1549Q9HCM3 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
KIAA1549Q9HCM3 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
KIAA1549Q9HCM3 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
KIAA1549Q9HCM3 AL589994.1-201ENST00000404962 340 ntBASIC3.02□□□□□ -1.93
KIAA1549Q9HCM3 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
KIAA1549Q9HCM3 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
KIAA1549Q9HCM3 AC016687.1-201ENST00000482574 353 ntBASIC3.02□□□□□ -1.93
KIAA1549Q9HCM3 snoU109.6-201ENST00000516831 118 ntBASIC3.02□□□□□ -1.93
KIAA1549Q9HCM3 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC3.02□□□□□ -1.93
KIAA1549Q9HCM3 NDUFB9P3-201ENST00000521269 501 ntBASIC3.02□□□□□ -1.93
KIAA1549Q9HCM3 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC3.02□□□□□ -1.93
KIAA1549Q9HCM3 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC3.02□□□□□ -1.93
KIAA1549Q9HCM3 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.02□□□□□ -1.93
KIAA1549Q9HCM3 AC011611.1-201ENST00000552179 197 ntBASIC3.02□□□□□ -1.93
KIAA1549Q9HCM3 AL606834.2-201ENST00000602954 668 ntBASIC3.02□□□□□ -1.93
KIAA1549Q9HCM3 AL713998.2-201ENST00000604538 1198 ntBASIC3.02□□□□□ -1.93
KIAA1549Q9HCM3 AC005000.2-201ENST00000605468 310 ntBASIC3.02□□□□□ -1.93
KIAA1549Q9HCM3 AC011816.2-201ENST00000607089 556 ntBASIC3.02□□□□□ -1.93
KIAA1549Q9HCM3 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.02□□□□□ -1.93
KIAA1549Q9HCM3 MIR6715B-201ENST00000637172 77 ntBASIC3.02□□□□□ -1.93
KIAA1549Q9HCM3 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
KIAA1549Q9HCM3 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
KIAA1549Q9HCM3 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
KIAA1549Q9HCM3 RNU6-55P-201ENST00000411092 107 ntBASIC3.01□□□□□ -1.93
KIAA1549Q9HCM3 RNU6-954P-201ENST00000411355 107 ntBASIC3.01□□□□□ -1.93
KIAA1549Q9HCM3 AC127526.1-201ENST00000417526 366 ntBASIC3.01□□□□□ -1.93
KIAA1549Q9HCM3 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.01□□□□□ -1.93
KIAA1549Q9HCM3 EIF4A1P11-201ENST00000451239 222 ntBASIC3.01□□□□□ -1.93
KIAA1549Q9HCM3 AC098583.1-201ENST00000480875 255 ntBASIC3.01□□□□□ -1.93
KIAA1549Q9HCM3 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.01□□□□□ -1.93
KIAA1549Q9HCM3 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.01□□□□□ -1.93
KIAA1549Q9HCM3 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC3.01□□□□□ -1.93
KIAA1549Q9HCM3 MIR5680-201ENST00000577577 84 ntBASIC3.01□□□□□ -1.93
KIAA1549Q9HCM3 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
KIAA1549Q9HCM3 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC3.01□□□□□ -1.93
KIAA1549Q9HCM3 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.01□□□□□ -1.93
KIAA1549Q9HCM3 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC3.01□□□□□ -1.93
KIAA1549Q9HCM3 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.01□□□□□ -1.93
KIAA1549Q9HCM3 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC3.01□□□□□ -1.93
KIAA1549Q9HCM3 AC134882.1-201ENST00000603738 1676 ntBASIC3.01□□□□□ -1.93
KIAA1549Q9HCM3 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.01□□□□□ -1.93
KIAA1549Q9HCM3 Z73965.1-201ENST00000623412 2297 ntBASIC3.01□□□□□ -1.93
KIAA1549Q9HCM3 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
KIAA1549Q9HCM3 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
KIAA1549Q9HCM3 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.01□□□□□ -1.93
KIAA1549Q9HCM3 RN7SKP44-201ENST00000363602 316 ntBASIC3.01□□□□□ -1.93
KIAA1549Q9HCM3 HMGN1P24-201ENST00000412282 298 ntBASIC3.01□□□□□ -1.93
KIAA1549Q9HCM3 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC3.01□□□□□ -1.93
KIAA1549Q9HCM3 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.01□□□□□ -1.93
KIAA1549Q9HCM3 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC3.01□□□□□ -1.93
KIAA1549Q9HCM3 RPF2P1-201ENST00000424137 906 ntBASIC3.01□□□□□ -1.93
KIAA1549Q9HCM3 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.01□□□□□ -1.93
KIAA1549Q9HCM3 RPL12P26-201ENST00000452430 487 ntBASIC3.01□□□□□ -1.93
KIAA1549Q9HCM3 SNORA59A-201ENST00000459326 152 ntBASIC3.01□□□□□ -1.93
KIAA1549Q9HCM3 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.01□□□□□ -1.93
KIAA1549Q9HCM3 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms