Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
UPF2Q9HAU5 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC4.59□□□□□ -1.67
UPF2Q9HAU5 RNU6-283P-201ENST00000364788 107 ntBASIC4.59□□□□□ -1.67
UPF2Q9HAU5 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
UPF2Q9HAU5 MIR320B1-201ENST00000390209 79 ntBASIC4.59□□□□□ -1.67
UPF2Q9HAU5 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
UPF2Q9HAU5 AL355615.1-201ENST00000406187 641 ntBASIC4.59□□□□□ -1.67
UPF2Q9HAU5 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC4.59□□□□□ -1.67
UPF2Q9HAU5 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC4.59□□□□□ -1.67
UPF2Q9HAU5 AC048351.1-201ENST00000420064 602 ntBASIC4.59□□□□□ -1.67
UPF2Q9HAU5 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC4.59□□□□□ -1.67
UPF2Q9HAU5 AC241520.1-201ENST00000422654 1099 ntBASIC4.59□□□□□ -1.67
UPF2Q9HAU5 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC4.59□□□□□ -1.67
UPF2Q9HAU5 AL732292.1-201ENST00000426692 226 ntBASIC4.59□□□□□ -1.67
UPF2Q9HAU5 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC4.59□□□□□ -1.67
UPF2Q9HAU5 MED6P1-201ENST00000439659 713 ntBASIC4.59□□□□□ -1.67
UPF2Q9HAU5 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC4.59□□□□□ -1.67
UPF2Q9HAU5 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC4.59□□□□□ -1.67
UPF2Q9HAU5 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC4.59□□□□□ -1.67
UPF2Q9HAU5 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC4.59□□□□□ -1.67
UPF2Q9HAU5 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC4.59□□□□□ -1.67
UPF2Q9HAU5 AC105137.1-201ENST00000484355 562 ntBASIC4.59□□□□□ -1.67
UPF2Q9HAU5 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC4.59□□□□□ -1.67
UPF2Q9HAU5 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC4.59□□□□□ -1.67
UPF2Q9HAU5 AC026784.1-201ENST00000507986 352 ntBASIC4.59□□□□□ -1.67
UPF2Q9HAU5 MTND5P11-201ENST00000511037 1812 ntBASIC4.59□□□□□ -1.67
UPF2Q9HAU5 RFESD-208ENST00000513950 464 ntTSL 5 BASIC4.59□□□□□ -1.67
UPF2Q9HAU5 SNORA19.3-201ENST00000516165 130 ntBASIC4.59□□□□□ -1.67
UPF2Q9HAU5 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC4.59□□□□□ -1.67
UPF2Q9HAU5 MAL2-205ENST00000521048 575 ntTSL 4 BASIC4.59□□□□□ -1.67
UPF2Q9HAU5 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC4.59□□□□□ -1.67
UPF2Q9HAU5 AC021451.1-201ENST00000523498 1129 ntBASIC4.59□□□□□ -1.67
UPF2Q9HAU5 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC4.59□□□□□ -1.67
UPF2Q9HAU5 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
UPF2Q9HAU5 AC010329.2-201ENST00000595195 2737 ntBASIC4.59□□□□□ -1.67
UPF2Q9HAU5 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC4.59□□□□□ -1.67
UPF2Q9HAU5 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.59□□□□□ -1.67
UPF2Q9HAU5 AC112220.2-201ENST00000605513 533 ntBASIC4.59□□□□□ -1.67
UPF2Q9HAU5 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC4.59□□□□□ -1.67
UPF2Q9HAU5 AL592295.2-201ENST00000612578 206 ntBASIC4.59□□□□□ -1.67
UPF2Q9HAU5 AL356863.1-201ENST00000623378 1080 ntBASIC4.59□□□□□ -1.67
UPF2Q9HAU5 AP000770.2-201ENST00000623694 100 ntBASIC4.59□□□□□ -1.67
UPF2Q9HAU5 PRO1804-201ENST00000623780 2050 ntBASIC4.59□□□□□ -1.67
UPF2Q9HAU5 AC073530.2-201ENST00000623987 261 ntBASIC4.59□□□□□ -1.67
UPF2Q9HAU5 LGI1-209ENST00000627699 664 ntTSL 3 BASIC4.59□□□□□ -1.67
UPF2Q9HAU5 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
UPF2Q9HAU5 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
UPF2Q9HAU5 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC4.59□□□□□ -1.68
UPF2Q9HAU5 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.59□□□□□ -1.68
UPF2Q9HAU5 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.68
UPF2Q9HAU5 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
UPF2Q9HAU5 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.58□□□□□ -1.68
UPF2Q9HAU5 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC4.58□□□□□ -1.68
UPF2Q9HAU5 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
UPF2Q9HAU5 RNU6-666P-201ENST00000363499 107 ntBASIC4.58□□□□□ -1.68
UPF2Q9HAU5 RNU6-304P-201ENST00000364855 107 ntBASIC4.58□□□□□ -1.68
UPF2Q9HAU5 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
UPF2Q9HAU5 RPS27AP11-201ENST00000402798 447 ntBASIC4.58□□□□□ -1.68
UPF2Q9HAU5 RNU4-6P-201ENST00000410804 122 ntBASIC4.58□□□□□ -1.68
UPF2Q9HAU5 AL450992.3-201ENST00000413192 568 ntBASIC4.58□□□□□ -1.68
UPF2Q9HAU5 TATDN1P1-201ENST00000414123 891 ntBASIC4.58□□□□□ -1.68
UPF2Q9HAU5 HMGB3P20-201ENST00000417997 600 ntBASIC4.58□□□□□ -1.68
UPF2Q9HAU5 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC4.58□□□□□ -1.68
UPF2Q9HAU5 PNRC2P1-201ENST00000423940 420 ntBASIC4.58□□□□□ -1.68
UPF2Q9HAU5 MTCO1P43-201ENST00000431831 488 ntBASIC4.58□□□□□ -1.68
UPF2Q9HAU5 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC4.58□□□□□ -1.68
UPF2Q9HAU5 TBCAP1-201ENST00000436520 327 ntBASIC4.58□□□□□ -1.68
UPF2Q9HAU5 ELOCP10-201ENST00000440624 327 ntBASIC4.58□□□□□ -1.68
UPF2Q9HAU5 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC4.58□□□□□ -1.68
UPF2Q9HAU5 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC4.58□□□□□ -1.68
UPF2Q9HAU5 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC4.58□□□□□ -1.68
UPF2Q9HAU5 EIF4A1P11-201ENST00000451239 222 ntBASIC4.58□□□□□ -1.68
UPF2Q9HAU5 AL139824.2-201ENST00000458731 1095 ntBASIC4.58□□□□□ -1.68
UPF2Q9HAU5 AC004801.2-202ENST00000463559 283 ntBASIC4.58□□□□□ -1.68
UPF2Q9HAU5 AC107398.1-201ENST00000486904 505 ntBASIC4.58□□□□□ -1.68
UPF2Q9HAU5 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC4.58□□□□□ -1.68
UPF2Q9HAU5 AC026407.1-201ENST00000518369 204 ntBASIC4.58□□□□□ -1.68
UPF2Q9HAU5 HIGD1AP18-201ENST00000520730 278 ntBASIC4.58□□□□□ -1.68
UPF2Q9HAU5 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.58□□□□□ -1.68
UPF2Q9HAU5 IGHVIII-38-1-201ENST00000521454 282 ntBASIC4.58□□□□□ -1.68
UPF2Q9HAU5 OR5AP1P-201ENST00000529730 940 ntBASIC4.58□□□□□ -1.68
UPF2Q9HAU5 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC4.58□□□□□ -1.68
UPF2Q9HAU5 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
UPF2Q9HAU5 AC068446.3-201ENST00000555285 382 ntBASIC4.58□□□□□ -1.68
UPF2Q9HAU5 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC4.58□□□□□ -1.68
UPF2Q9HAU5 MIR5096-201ENST00000583713 70 ntBASIC4.58□□□□□ -1.68
UPF2Q9HAU5 AC104785.1-201ENST00000603220 588 ntBASIC4.58□□□□□ -1.68
UPF2Q9HAU5 ELOCP34-201ENST00000604436 327 ntBASIC4.58□□□□□ -1.68
UPF2Q9HAU5 MIR6820-201ENST00000611508 62 ntBASIC4.58□□□□□ -1.68
UPF2Q9HAU5 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC4.58□□□□□ -1.68
UPF2Q9HAU5 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
UPF2Q9HAU5 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
UPF2Q9HAU5 TNPO1P3-201ENST00000436471 2662 ntBASIC4.58□□□□□ -1.68
UPF2Q9HAU5 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
UPF2Q9HAU5 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC4.58□□□□□ -1.68
UPF2Q9HAU5 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.57□□□□□ -1.68
UPF2Q9HAU5 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
UPF2Q9HAU5 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
UPF2Q9HAU5 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
UPF2Q9HAU5 MAPK10-372ENST00000641954 3413 ntBASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 118.9 ms