Protein–RNA interactions for Protein: Q9H6U6

BCAS3, Breast carcinoma-amplified sequence 3, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS3Q9H6U6 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.6□□□□□ -1.51
BCAS3Q9H6U6 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC5.6□□□□□ -1.51
BCAS3Q9H6U6 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC5.6□□□□□ -1.51
BCAS3Q9H6U6 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.6□□□□□ -1.51
BCAS3Q9H6U6 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
BCAS3Q9H6U6 BNIP3P9-201ENST00000603714 553 ntBASIC5.6□□□□□ -1.51
BCAS3Q9H6U6 AC131902.3-201ENST00000611767 581 ntBASIC5.6□□□□□ -1.51
BCAS3Q9H6U6 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.6□□□□□ -1.51
BCAS3Q9H6U6 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC5.6□□□□□ -1.51
BCAS3Q9H6U6 AC136475.10-201ENST00000620253 385 ntBASIC5.6□□□□□ -1.51
BCAS3Q9H6U6 AL139089.1-201ENST00000620372 975 ntBASIC5.6□□□□□ -1.51
BCAS3Q9H6U6 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC5.6□□□□□ -1.51
BCAS3Q9H6U6 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
BCAS3Q9H6U6 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.6□□□□□ -1.51
BCAS3Q9H6U6 AC073136.1-201ENST00000449426 2884 ntBASIC5.6□□□□□ -1.51
BCAS3Q9H6U6 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
BCAS3Q9H6U6 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.51
BCAS3Q9H6U6 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
BCAS3Q9H6U6 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC5.59□□□□□ -1.51
BCAS3Q9H6U6 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
BCAS3Q9H6U6 CDR1-202ENST00000625883 1485 ntBASIC5.59□□□□□ -1.51
BCAS3Q9H6U6 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
BCAS3Q9H6U6 AC107982.1-201ENST00000507171 1300 ntBASIC5.59□□□□□ -1.51
BCAS3Q9H6U6 AC099654.2-201ENST00000433031 1980 ntBASIC5.59□□□□□ -1.51
BCAS3Q9H6U6 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
BCAS3Q9H6U6 RNU6-1066P-201ENST00000363573 105 ntBASIC5.59□□□□□ -1.51
BCAS3Q9H6U6 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC5.59□□□□□ -1.51
BCAS3Q9H6U6 Y_RNA.453-201ENST00000384223 109 ntBASIC5.59□□□□□ -1.51
BCAS3Q9H6U6 SNORA48.4-201ENST00000391089 134 ntBASIC5.59□□□□□ -1.51
BCAS3Q9H6U6 HMGB3P23-201ENST00000414981 585 ntBASIC5.59□□□□□ -1.51
BCAS3Q9H6U6 AC093698.1-201ENST00000423843 571 ntBASIC5.59□□□□□ -1.51
BCAS3Q9H6U6 RPL23AP4-201ENST00000427757 463 ntBASIC5.59□□□□□ -1.51
BCAS3Q9H6U6 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC5.59□□□□□ -1.51
BCAS3Q9H6U6 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC5.59□□□□□ -1.51
BCAS3Q9H6U6 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC5.59□□□□□ -1.51
BCAS3Q9H6U6 PPIAP17-201ENST00000438507 471 ntBASIC5.59□□□□□ -1.51
BCAS3Q9H6U6 AC011753.3-201ENST00000443436 406 ntBASIC5.59□□□□□ -1.51
BCAS3Q9H6U6 AC104306.1-201ENST00000449702 371 ntBASIC5.59□□□□□ -1.51
BCAS3Q9H6U6 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC5.59□□□□□ -1.51
BCAS3Q9H6U6 TPT1P13-201ENST00000449760 499 ntBASIC5.59□□□□□ -1.51
BCAS3Q9H6U6 GAPDHP14-201ENST00000450472 937 ntBASIC5.59□□□□□ -1.51
BCAS3Q9H6U6 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC5.59□□□□□ -1.51
BCAS3Q9H6U6 AC112206.1-201ENST00000468416 477 ntBASIC5.59□□□□□ -1.51
BCAS3Q9H6U6 AC069439.1-201ENST00000494739 167 ntBASIC5.59□□□□□ -1.51
BCAS3Q9H6U6 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC5.59□□□□□ -1.51
BCAS3Q9H6U6 AC108078.1-201ENST00000508073 725 ntBASIC5.59□□□□□ -1.51
BCAS3Q9H6U6 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC5.59□□□□□ -1.51
BCAS3Q9H6U6 AC098976.1-201ENST00000513014 541 ntBASIC5.59□□□□□ -1.51
BCAS3Q9H6U6 NPM1P21-201ENST00000513394 762 ntBASIC5.59□□□□□ -1.51
BCAS3Q9H6U6 RNU6-358P-201ENST00000516564 75 ntBASIC5.59□□□□□ -1.51
BCAS3Q9H6U6 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC5.59□□□□□ -1.51
BCAS3Q9H6U6 GTF2IP11-201ENST00000526931 420 ntBASIC5.59□□□□□ -1.51
BCAS3Q9H6U6 OR5AQ1P-201ENST00000527596 927 ntBASIC5.59□□□□□ -1.51
BCAS3Q9H6U6 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC5.59□□□□□ -1.51
BCAS3Q9H6U6 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.59□□□□□ -1.51
BCAS3Q9H6U6 GSTP1P1-201ENST00000548078 319 ntBASIC5.59□□□□□ -1.51
BCAS3Q9H6U6 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
BCAS3Q9H6U6 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC5.59□□□□□ -1.51
BCAS3Q9H6U6 MIR4330-201ENST00000579077 105 ntBASIC5.59□□□□□ -1.51
BCAS3Q9H6U6 AP001521.2-201ENST00000608772 546 ntBASIC5.59□□□□□ -1.51
BCAS3Q9H6U6 AL031658.2-201ENST00000616850 651 ntBASIC5.59□□□□□ -1.51
BCAS3Q9H6U6 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC5.59□□□□□ -1.51
BCAS3Q9H6U6 AL022401.1-201ENST00000619498 108 ntBASIC5.59□□□□□ -1.51
BCAS3Q9H6U6 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC5.59□□□□□ -1.51
BCAS3Q9H6U6 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
BCAS3Q9H6U6 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.51
BCAS3Q9H6U6 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
BCAS3Q9H6U6 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.59□□□□□ -1.52
BCAS3Q9H6U6 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.59□□□□□ -1.52
BCAS3Q9H6U6 AC117529.2-201ENST00000512159 2068 ntBASIC5.59□□□□□ -1.52
BCAS3Q9H6U6 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC5.58□□□□□ -1.52
BCAS3Q9H6U6 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
BCAS3Q9H6U6 OSBPL9P1-201ENST00000604744 1469 ntBASIC5.58□□□□□ -1.52
BCAS3Q9H6U6 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
BCAS3Q9H6U6 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
BCAS3Q9H6U6 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC5.58□□□□□ -1.52
BCAS3Q9H6U6 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
BCAS3Q9H6U6 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.58□□□□□ -1.52
BCAS3Q9H6U6 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
BCAS3Q9H6U6 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
BCAS3Q9H6U6 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
BCAS3Q9H6U6 RNA5SP505-201ENST00000364748 108 ntBASIC5.58□□□□□ -1.52
BCAS3Q9H6U6 RNU5E-5P-201ENST00000365379 116 ntBASIC5.58□□□□□ -1.52
BCAS3Q9H6U6 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
BCAS3Q9H6U6 RNU6-116P-201ENST00000384042 109 ntBASIC5.58□□□□□ -1.52
BCAS3Q9H6U6 MT-TL1-201ENST00000386347 75 ntBASIC5.58□□□□□ -1.52
BCAS3Q9H6U6 SNORA40.3-201ENST00000390964 122 ntBASIC5.58□□□□□ -1.52
BCAS3Q9H6U6 RPL23AP29-201ENST00000397284 453 ntBASIC5.58□□□□□ -1.52
BCAS3Q9H6U6 AL357515.1-201ENST00000402967 542 ntBASIC5.58□□□□□ -1.52
BCAS3Q9H6U6 CCNG1P1-201ENST00000406783 885 ntBASIC5.58□□□□□ -1.52
BCAS3Q9H6U6 FCF1P10-201ENST00000407590 479 ntBASIC5.58□□□□□ -1.52
BCAS3Q9H6U6 LSM5-205ENST00000409952 687 ntTSL 4 BASIC5.58□□□□□ -1.52
BCAS3Q9H6U6 RNA5SP113-201ENST00000410486 84 ntBASIC5.58□□□□□ -1.52
BCAS3Q9H6U6 AC016397.1-201ENST00000412463 242 ntBASIC5.58□□□□□ -1.52
BCAS3Q9H6U6 USP9YP13-201ENST00000417797 480 ntBASIC5.58□□□□□ -1.52
BCAS3Q9H6U6 AL121878.1-201ENST00000418638 859 ntBASIC5.58□□□□□ -1.52
BCAS3Q9H6U6 AC062016.2-201ENST00000420950 676 ntBASIC5.58□□□□□ -1.52
BCAS3Q9H6U6 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
BCAS3Q9H6U6 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC5.58□□□□□ -1.52
BCAS3Q9H6U6 RPL39P6-201ENST00000448289 150 ntBASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 160 ms