Protein–RNA interactions for Protein: Q96M95

CCDC42, Coiled-coil domain-containing protein 42, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42Q96M95 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC3.67□□□□□ -1.82
CCDC42Q96M95 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC3.67□□□□□ -1.82
CCDC42Q96M95 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC3.67□□□□□ -1.82
CCDC42Q96M95 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC3.67□□□□□ -1.82
CCDC42Q96M95 RN7SKP289-201ENST00000517244 295 ntBASIC3.67□□□□□ -1.82
CCDC42Q96M95 IGKV2D-10-201ENST00000520194 281 ntBASIC3.67□□□□□ -1.82
CCDC42Q96M95 AC104027.1-201ENST00000521887 300 ntBASIC3.67□□□□□ -1.82
CCDC42Q96M95 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC3.67□□□□□ -1.82
CCDC42Q96M95 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.67□□□□□ -1.82
CCDC42Q96M95 AP000919.1-202ENST00000581139 1264 ntBASIC3.67□□□□□ -1.82
CCDC42Q96M95 AL391497.1-201ENST00000608671 547 ntBASIC3.67□□□□□ -1.82
CCDC42Q96M95 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.67□□□□□ -1.82
CCDC42Q96M95 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CCDC42Q96M95 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC3.67□□□□□ -1.82
CCDC42Q96M95 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.67□□□□□ -1.82
CCDC42Q96M95 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
CCDC42Q96M95 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
CCDC42Q96M95 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.66□□□□□ -1.82
CCDC42Q96M95 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CCDC42Q96M95 AC138915.3-201ENST00000562908 1389 ntBASIC3.66□□□□□ -1.82
CCDC42Q96M95 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CCDC42Q96M95 AC005183.1-201ENST00000603687 1979 ntBASIC3.66□□□□□ -1.82
CCDC42Q96M95 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CCDC42Q96M95 RNA5SP383-201ENST00000362934 120 ntBASIC3.66□□□□□ -1.82
CCDC42Q96M95 SNORA73.2-201ENST00000364946 201 ntBASIC3.66□□□□□ -1.82
CCDC42Q96M95 RNU6-805P-201ENST00000365643 106 ntBASIC3.66□□□□□ -1.82
CCDC42Q96M95 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
CCDC42Q96M95 AC136624.1-201ENST00000400791 413 ntBASIC3.66□□□□□ -1.82
CCDC42Q96M95 AL035423.1-201ENST00000420331 213 ntBASIC3.66□□□□□ -1.82
CCDC42Q96M95 AC092832.1-201ENST00000422934 400 ntBASIC3.66□□□□□ -1.82
CCDC42Q96M95 AC105402.2-201ENST00000438503 358 ntBASIC3.66□□□□□ -1.82
CCDC42Q96M95 ISCA1P2-201ENST00000438679 421 ntBASIC3.66□□□□□ -1.82
CCDC42Q96M95 PPIAP3-201ENST00000450588 505 ntBASIC3.66□□□□□ -1.82
CCDC42Q96M95 SNORD105B-201ENST00000458770 79 ntBASIC3.66□□□□□ -1.82
CCDC42Q96M95 AC022336.1-201ENST00000475510 337 ntBASIC3.66□□□□□ -1.82
CCDC42Q96M95 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC3.66□□□□□ -1.82
CCDC42Q96M95 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.66□□□□□ -1.82
CCDC42Q96M95 ARL6IP1P1-201ENST00000545836 610 ntBASIC3.66□□□□□ -1.82
CCDC42Q96M95 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CCDC42Q96M95 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC3.66□□□□□ -1.82
CCDC42Q96M95 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC3.66□□□□□ -1.82
CCDC42Q96M95 AC022916.3-201ENST00000592961 742 ntBASIC3.66□□□□□ -1.82
CCDC42Q96M95 AC020914.6-201ENST00000594327 272 ntBASIC3.66□□□□□ -1.82
CCDC42Q96M95 AC006557.5-201ENST00000603126 811 ntBASIC3.66□□□□□ -1.82
CCDC42Q96M95 AC011816.2-201ENST00000607089 556 ntBASIC3.66□□□□□ -1.82
CCDC42Q96M95 SNORA35B-201ENST00000607417 129 ntBASIC3.66□□□□□ -1.82
CCDC42Q96M95 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
CCDC42Q96M95 AC099669.2-201ENST00000616549 437 ntBASIC3.66□□□□□ -1.82
CCDC42Q96M95 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CCDC42Q96M95 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.66□□□□□ -1.82
CCDC42Q96M95 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC3.66□□□□□ -1.82
CCDC42Q96M95 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.66□□□□□ -1.82
CCDC42Q96M95 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.66□□□□□ -1.82
CCDC42Q96M95 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CCDC42Q96M95 AC091152.2-201ENST00000591628 2569 ntBASIC3.65□□□□□ -1.82
CCDC42Q96M95 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
CCDC42Q96M95 MIR141-201ENST00000384975 95 ntBASIC3.65□□□□□ -1.83
CCDC42Q96M95 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC3.65□□□□□ -1.83
CCDC42Q96M95 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.65□□□□□ -1.83
CCDC42Q96M95 BX890604.2-201ENST00000427883 474 ntBASIC3.65□□□□□ -1.83
CCDC42Q96M95 HMGB3P11-201ENST00000440127 604 ntBASIC3.65□□□□□ -1.83
CCDC42Q96M95 TPT1P12-201ENST00000448968 492 ntBASIC3.65□□□□□ -1.83
CCDC42Q96M95 SNRPGP3-201ENST00000469405 227 ntBASIC3.65□□□□□ -1.83
CCDC42Q96M95 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
CCDC42Q96M95 NPM1P41-201ENST00000512920 831 ntBASIC3.65□□□□□ -1.83
CCDC42Q96M95 AC006518.1-201ENST00000541449 943 ntBASIC3.65□□□□□ -1.83
CCDC42Q96M95 UBE2NP1-201ENST00000545592 458 ntBASIC3.65□□□□□ -1.83
CCDC42Q96M95 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC3.65□□□□□ -1.83
CCDC42Q96M95 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.65□□□□□ -1.83
CCDC42Q96M95 AC010680.4-201ENST00000605334 543 ntBASIC3.65□□□□□ -1.83
CCDC42Q96M95 MIR7851-201ENST00000610611 160 ntBASIC3.65□□□□□ -1.83
CCDC42Q96M95 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC3.65□□□□□ -1.83
CCDC42Q96M95 AC018816.2-201ENST00000621460 353 ntBASIC3.65□□□□□ -1.83
CCDC42Q96M95 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
CCDC42Q96M95 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
CCDC42Q96M95 AL645937.1-201ENST00000641739 1652 ntBASIC3.65□□□□□ -1.83
CCDC42Q96M95 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
CCDC42Q96M95 AC138393.1-206ENST00000540997 1886 ntBASIC3.64□□□□□ -1.83
CCDC42Q96M95 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CCDC42Q96M95 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.64□□□□□ -1.83
CCDC42Q96M95 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CCDC42Q96M95 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CCDC42Q96M95 Y_RNA.62-201ENST00000362840 99 ntBASIC3.64□□□□□ -1.83
CCDC42Q96M95 SNORA70.2-201ENST00000364506 135 ntBASIC3.64□□□□□ -1.83
CCDC42Q96M95 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC3.64□□□□□ -1.83
CCDC42Q96M95 GTF2IP23-201ENST00000423746 351 ntBASIC3.64□□□□□ -1.83
CCDC42Q96M95 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.64□□□□□ -1.83
CCDC42Q96M95 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.64□□□□□ -1.83
CCDC42Q96M95 AC125238.1-201ENST00000448842 249 ntBASIC3.64□□□□□ -1.83
CCDC42Q96M95 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.64□□□□□ -1.83
CCDC42Q96M95 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.64□□□□□ -1.83
CCDC42Q96M95 TVP23BP2-201ENST00000455082 615 ntBASIC3.64□□□□□ -1.83
CCDC42Q96M95 AC021205.1-201ENST00000468797 348 ntBASIC3.64□□□□□ -1.83
CCDC42Q96M95 AP002884.2-201ENST00000471647 395 ntBASIC3.64□□□□□ -1.83
CCDC42Q96M95 AC108078.3-201ENST00000502633 489 ntBASIC3.64□□□□□ -1.83
CCDC42Q96M95 TXNP6-201ENST00000510190 310 ntBASIC3.64□□□□□ -1.83
CCDC42Q96M95 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.64□□□□□ -1.83
CCDC42Q96M95 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC3.64□□□□□ -1.83
CCDC42Q96M95 PARP1P2-201ENST00000556806 195 ntBASIC3.64□□□□□ -1.83
CCDC42Q96M95 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms