Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 AC006466.1-201ENST00000438721 289 ntBASIC5.22□□□□□ -1.57
CDK5RAP3Q96JB5 AL772161.1-201ENST00000439130 476 ntBASIC5.22□□□□□ -1.57
CDK5RAP3Q96JB5 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC5.22□□□□□ -1.57
CDK5RAP3Q96JB5 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC5.22□□□□□ -1.57
CDK5RAP3Q96JB5 AC118469.1-201ENST00000442943 488 ntBASIC5.22□□□□□ -1.57
CDK5RAP3Q96JB5 RPS27AP8-201ENST00000452665 445 ntBASIC5.22□□□□□ -1.57
CDK5RAP3Q96JB5 AC006967.1-201ENST00000467608 589 ntBASIC5.22□□□□□ -1.57
CDK5RAP3Q96JB5 NCOR1P1-202ENST00000486162 291 ntBASIC5.22□□□□□ -1.57
CDK5RAP3Q96JB5 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC5.22□□□□□ -1.57
CDK5RAP3Q96JB5 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC5.22□□□□□ -1.57
CDK5RAP3Q96JB5 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC5.22□□□□□ -1.57
CDK5RAP3Q96JB5 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC5.22□□□□□ -1.57
CDK5RAP3Q96JB5 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC5.22□□□□□ -1.57
CDK5RAP3Q96JB5 RNU6-488P-201ENST00000515918 99 ntBASIC5.22□□□□□ -1.57
CDK5RAP3Q96JB5 RN7SKP96-201ENST00000516948 297 ntBASIC5.22□□□□□ -1.57
CDK5RAP3Q96JB5 SNORA48.10-201ENST00000516965 160 ntBASIC5.22□□□□□ -1.57
CDK5RAP3Q96JB5 NAP1L1P1-201ENST00000524793 1063 ntBASIC5.22□□□□□ -1.57
CDK5RAP3Q96JB5 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC5.22□□□□□ -1.57
CDK5RAP3Q96JB5 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC5.22□□□□□ -1.57
CDK5RAP3Q96JB5 TRAV15-201ENST00000556680 249 ntBASIC5.22□□□□□ -1.57
CDK5RAP3Q96JB5 AP005136.1-201ENST00000579765 429 ntBASIC5.22□□□□□ -1.57
CDK5RAP3Q96JB5 RNF138P2-201ENST00000603490 592 ntBASIC5.22□□□□□ -1.57
CDK5RAP3Q96JB5 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC5.22□□□□□ -1.57
CDK5RAP3Q96JB5 AL136981.2-201ENST00000617319 734 ntBASIC5.22□□□□□ -1.57
CDK5RAP3Q96JB5 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CDK5RAP3Q96JB5 AC022106.2-201ENST00000620114 757 ntBASIC5.22□□□□□ -1.57
CDK5RAP3Q96JB5 AF246928.1-201ENST00000623768 87 ntBASIC5.22□□□□□ -1.57
CDK5RAP3Q96JB5 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC5.22□□□□□ -1.57
CDK5RAP3Q96JB5 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
CDK5RAP3Q96JB5 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC5.22□□□□□ -1.57
CDK5RAP3Q96JB5 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC5.22□□□□□ -1.57
CDK5RAP3Q96JB5 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
CDK5RAP3Q96JB5 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CDK5RAP3Q96JB5 SLC2A3P1-201ENST00000519666 1451 ntBASIC5.21□□□□□ -1.58
CDK5RAP3Q96JB5 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC5.21□□□□□ -1.58
CDK5RAP3Q96JB5 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
CDK5RAP3Q96JB5 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CDK5RAP3Q96JB5 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
CDK5RAP3Q96JB5 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CDK5RAP3Q96JB5 RNU6-984P-201ENST00000363236 109 ntBASIC5.21□□□□□ -1.58
CDK5RAP3Q96JB5 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CDK5RAP3Q96JB5 SNORD116-9-201ENST00000384000 95 ntBASIC5.21□□□□□ -1.58
CDK5RAP3Q96JB5 SNORD116-3-201ENST00000384287 95 ntBASIC5.21□□□□□ -1.58
CDK5RAP3Q96JB5 SNORD116-7-201ENST00000384404 95 ntBASIC5.21□□□□□ -1.58
CDK5RAP3Q96JB5 SNORD116-5-201ENST00000384462 95 ntBASIC5.21□□□□□ -1.58
CDK5RAP3Q96JB5 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
CDK5RAP3Q96JB5 AC068533.2-201ENST00000411872 306 ntBASIC5.21□□□□□ -1.58
CDK5RAP3Q96JB5 TRBV24OR9-2-201ENST00000416632 435 ntBASIC5.21□□□□□ -1.58
CDK5RAP3Q96JB5 AC092634.6-201ENST00000418558 192 ntBASIC5.21□□□□□ -1.58
CDK5RAP3Q96JB5 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC5.21□□□□□ -1.58
CDK5RAP3Q96JB5 SEPT2P1-201ENST00000419651 180 ntBASIC5.21□□□□□ -1.58
CDK5RAP3Q96JB5 AC009237.2-201ENST00000421358 284 ntBASIC5.21□□□□□ -1.58
CDK5RAP3Q96JB5 AC233981.1-201ENST00000423224 461 ntBASIC5.21□□□□□ -1.58
CDK5RAP3Q96JB5 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC5.21□□□□□ -1.58
CDK5RAP3Q96JB5 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC5.21□□□□□ -1.58
CDK5RAP3Q96JB5 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CDK5RAP3Q96JB5 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CDK5RAP3Q96JB5 AC011005.3-201ENST00000491624 395 ntBASIC5.21□□□□□ -1.58
CDK5RAP3Q96JB5 RPL36AP41-201ENST00000493820 306 ntBASIC5.21□□□□□ -1.58
CDK5RAP3Q96JB5 RPS4XP18-201ENST00000495480 763 ntBASIC5.21□□□□□ -1.58
CDK5RAP3Q96JB5 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC5.21□□□□□ -1.58
CDK5RAP3Q96JB5 HSPE1P23-201ENST00000509838 286 ntBASIC5.21□□□□□ -1.58
CDK5RAP3Q96JB5 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC5.21□□□□□ -1.58
CDK5RAP3Q96JB5 AC117532.1-201ENST00000514638 323 ntBASIC5.21□□□□□ -1.58
CDK5RAP3Q96JB5 RNU6-1261P-201ENST00000517194 104 ntBASIC5.21□□□□□ -1.58
CDK5RAP3Q96JB5 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC5.21□□□□□ -1.58
CDK5RAP3Q96JB5 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC5.21□□□□□ -1.58
CDK5RAP3Q96JB5 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC5.21□□□□□ -1.58
CDK5RAP3Q96JB5 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC5.21□□□□□ -1.58
CDK5RAP3Q96JB5 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC5.21□□□□□ -1.58
CDK5RAP3Q96JB5 AC015912.2-201ENST00000571053 181 ntBASIC5.21□□□□□ -1.58
CDK5RAP3Q96JB5 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC5.21□□□□□ -1.58
CDK5RAP3Q96JB5 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC5.21□□□□□ -1.58
CDK5RAP3Q96JB5 MIR4480-201ENST00000582492 71 ntBASIC5.21□□□□□ -1.58
CDK5RAP3Q96JB5 AC006270.3-201ENST00000605967 1036 ntBASIC5.21□□□□□ -1.58
CDK5RAP3Q96JB5 AC004948.1-201ENST00000609858 672 ntBASIC5.21□□□□□ -1.58
CDK5RAP3Q96JB5 AC004223.4-201ENST00000612426 332 ntBASIC5.21□□□□□ -1.58
CDK5RAP3Q96JB5 AC073530.2-201ENST00000623987 261 ntBASIC5.21□□□□□ -1.58
CDK5RAP3Q96JB5 AP001784.1-201ENST00000624107 428 ntBASIC5.21□□□□□ -1.58
CDK5RAP3Q96JB5 U3.53-201ENST00000628922 216 ntBASIC5.21□□□□□ -1.58
CDK5RAP3Q96JB5 AC026634.1-201ENST00000634369 198 ntBASIC5.21□□□□□ -1.58
CDK5RAP3Q96JB5 AC092435.4-201ENST00000623012 4159 ntBASIC5.21□□□□□ -1.58
CDK5RAP3Q96JB5 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CDK5RAP3Q96JB5 AC010928.1-201ENST00000592477 1447 ntBASIC5.21□□□□□ -1.58
CDK5RAP3Q96JB5 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CDK5RAP3Q96JB5 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
CDK5RAP3Q96JB5 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC5.21□□□□□ -1.58
CDK5RAP3Q96JB5 ZNF137P-201ENST00000456718 1920 ntBASIC5.21□□□□□ -1.58
CDK5RAP3Q96JB5 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CDK5RAP3Q96JB5 CARF-203ENST00000414439 2099 ntTSL 2 BASIC5.2□□□□□ -1.58
CDK5RAP3Q96JB5 CDR1-202ENST00000625883 1485 ntBASIC5.2□□□□□ -1.58
CDK5RAP3Q96JB5 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CDK5RAP3Q96JB5 AL672167.1-203ENST00000641299 2975 ntBASIC5.2□□□□□ -1.58
CDK5RAP3Q96JB5 AL391684.1-202ENST00000641293 1636 ntBASIC5.2□□□□□ -1.58
CDK5RAP3Q96JB5 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC5.2□□□□□ -1.58
CDK5RAP3Q96JB5 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CDK5RAP3Q96JB5 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC5.2□□□□□ -1.58
CDK5RAP3Q96JB5 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
CDK5RAP3Q96JB5 RNA5SP87-201ENST00000384155 118 ntBASIC5.2□□□□□ -1.58
CDK5RAP3Q96JB5 Y_RNA.560-201ENST00000384689 102 ntBASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 132.9 ms