Protein–RNA interactions for Protein: Q8WV44

TRIM41, E3 ubiquitin-protein ligase TRIM41, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41Q8WV44 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
TRIM41Q8WV44 GTF2IP4-201ENST00000453092 2054 ntBASIC9.75□□□□□ -0.85
TRIM41Q8WV44 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC9.75□□□□□ -0.85
TRIM41Q8WV44 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC9.75□□□□□ -0.85
TRIM41Q8WV44 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
TRIM41Q8WV44 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
TRIM41Q8WV44 RNU1-39P-201ENST00000383897 165 ntBASIC9.75□□□□□ -0.85
TRIM41Q8WV44 RNU6-456P-201ENST00000384493 107 ntBASIC9.75□□□□□ -0.85
TRIM41Q8WV44 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC9.75□□□□□ -0.85
TRIM41Q8WV44 AC009161.1-201ENST00000417306 376 ntBASIC9.75□□□□□ -0.85
TRIM41Q8WV44 AL645937.1-202ENST00000421799 937 ntBASIC9.75□□□□□ -0.85
TRIM41Q8WV44 OR51AB1P-201ENST00000429046 620 ntBASIC9.75□□□□□ -0.85
TRIM41Q8WV44 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC9.75□□□□□ -0.85
TRIM41Q8WV44 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
TRIM41Q8WV44 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC9.75□□□□□ -0.85
TRIM41Q8WV44 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC9.75□□□□□ -0.85
TRIM41Q8WV44 AC013356.1-201ENST00000489027 564 ntBASIC9.75□□□□□ -0.85
TRIM41Q8WV44 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC9.75□□□□□ -0.85
TRIM41Q8WV44 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC9.75□□□□□ -0.85
TRIM41Q8WV44 Y_RNA.711-201ENST00000516993 102 ntBASIC9.75□□□□□ -0.85
TRIM41Q8WV44 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC9.75□□□□□ -0.85
TRIM41Q8WV44 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC9.75□□□□□ -0.85
TRIM41Q8WV44 AP003181.2-201ENST00000528941 181 ntBASIC9.75□□□□□ -0.85
TRIM41Q8WV44 PDCD5P1-201ENST00000543528 309 ntBASIC9.75□□□□□ -0.85
TRIM41Q8WV44 SCOCP1-201ENST00000554676 349 ntBASIC9.75□□□□□ -0.85
TRIM41Q8WV44 MIR4260-201ENST00000583107 67 ntBASIC9.75□□□□□ -0.85
TRIM41Q8WV44 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC9.75□□□□□ -0.85
TRIM41Q8WV44 AC090525.3-201ENST00000605601 189 ntBASIC9.75□□□□□ -0.85
TRIM41Q8WV44 AC068724.3-201ENST00000625906 87 ntBASIC9.75□□□□□ -0.85
TRIM41Q8WV44 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC9.75□□□□□ -0.85
TRIM41Q8WV44 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
TRIM41Q8WV44 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC9.75□□□□□ -0.85
TRIM41Q8WV44 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC9.75□□□□□ -0.85
TRIM41Q8WV44 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
TRIM41Q8WV44 MFSD8-239ENST00000641590 2479 ntBASIC9.75□□□□□ -0.85
TRIM41Q8WV44 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
TRIM41Q8WV44 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC9.75□□□□□ -0.85
TRIM41Q8WV44 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC9.75□□□□□ -0.85
TRIM41Q8WV44 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC9.74□□□□□ -0.85
TRIM41Q8WV44 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC9.74□□□□□ -0.85
TRIM41Q8WV44 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC9.74□□□□□ -0.85
TRIM41Q8WV44 CCT8P1-201ENST00000413611 1657 ntBASIC9.74□□□□□ -0.85
TRIM41Q8WV44 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
TRIM41Q8WV44 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
TRIM41Q8WV44 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC9.74□□□□□ -0.85
TRIM41Q8WV44 AP004607.3-201ENST00000530354 3915 ntBASIC9.74□□□□□ -0.85
TRIM41Q8WV44 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
TRIM41Q8WV44 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC9.74□□□□□ -0.85
TRIM41Q8WV44 OR5J1P-201ENST00000313544 939 ntBASIC9.74□□□□□ -0.85
TRIM41Q8WV44 AC011155.1-201ENST00000316512 456 ntBASIC9.74□□□□□ -0.85
TRIM41Q8WV44 SNORD42.2-201ENST00000365570 69 ntBASIC9.74□□□□□ -0.85
TRIM41Q8WV44 Y_RNA.445-201ENST00000384168 102 ntBASIC9.74□□□□□ -0.85
TRIM41Q8WV44 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
TRIM41Q8WV44 RNU4-64P-201ENST00000410795 131 ntBASIC9.74□□□□□ -0.85
TRIM41Q8WV44 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC9.74□□□□□ -0.85
TRIM41Q8WV44 SNRPFP1-201ENST00000414761 252 ntBASIC9.74□□□□□ -0.85
TRIM41Q8WV44 AC245054.2-201ENST00000415639 319 ntBASIC9.74□□□□□ -0.85
TRIM41Q8WV44 MTATP6P18-201ENST00000417994 673 ntBASIC9.74□□□□□ -0.85
TRIM41Q8WV44 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
TRIM41Q8WV44 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC9.74□□□□□ -0.85
TRIM41Q8WV44 AL158073.1-201ENST00000426848 1104 ntBASIC9.74□□□□□ -0.85
TRIM41Q8WV44 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC9.74□□□□□ -0.85
TRIM41Q8WV44 RPL36AP53-201ENST00000432891 316 ntBASIC9.74□□□□□ -0.85
TRIM41Q8WV44 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
TRIM41Q8WV44 AC096775.1-201ENST00000437724 448 ntBASIC9.74□□□□□ -0.85
TRIM41Q8WV44 GTF2IP13-201ENST00000438487 386 ntBASIC9.74□□□□□ -0.85
TRIM41Q8WV44 NF1P3-201ENST00000457709 450 ntBASIC9.74□□□□□ -0.85
TRIM41Q8WV44 AC021205.1-201ENST00000468797 348 ntBASIC9.74□□□□□ -0.85
TRIM41Q8WV44 TRBV5-2-201ENST00000489095 273 ntBASIC9.74□□□□□ -0.85
TRIM41Q8WV44 RFPL4AP3-201ENST00000515267 345 ntBASIC9.74□□□□□ -0.85
TRIM41Q8WV44 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC9.74□□□□□ -0.85
TRIM41Q8WV44 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
TRIM41Q8WV44 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC9.74□□□□□ -0.85
TRIM41Q8WV44 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC9.74□□□□□ -0.85
TRIM41Q8WV44 AC034105.4-201ENST00000568304 277 ntBASIC9.74□□□□□ -0.85
TRIM41Q8WV44 PACRG-211ENST00000621363 360 ntTSL 5 BASIC9.74□□□□□ -0.85
TRIM41Q8WV44 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
TRIM41Q8WV44 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC9.74□□□□□ -0.85
TRIM41Q8WV44 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
TRIM41Q8WV44 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
TRIM41Q8WV44 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC9.74□□□□□ -0.85
TRIM41Q8WV44 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC9.74□□□□□ -0.85
TRIM41Q8WV44 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
TRIM41Q8WV44 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
TRIM41Q8WV44 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
TRIM41Q8WV44 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC9.73□□□□□ -0.85
TRIM41Q8WV44 AC034229.2-201ENST00000566945 2508 ntBASIC9.73□□□□□ -0.85
TRIM41Q8WV44 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC9.73□□□□□ -0.85
TRIM41Q8WV44 AC005294.1-201ENST00000355509 281 ntBASIC9.73□□□□□ -0.85
TRIM41Q8WV44 RN7SKP6-201ENST00000364795 319 ntBASIC9.73□□□□□ -0.85
TRIM41Q8WV44 RPL5P18-201ENST00000406671 891 ntBASIC9.73□□□□□ -0.85
TRIM41Q8WV44 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC9.73□□□□□ -0.85
TRIM41Q8WV44 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC9.73□□□□□ -0.85
TRIM41Q8WV44 IFNA20P-201ENST00000436840 528 ntBASIC9.73□□□□□ -0.85
TRIM41Q8WV44 HMGB1P18-201ENST00000438801 619 ntBASIC9.73□□□□□ -0.85
TRIM41Q8WV44 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC9.73□□□□□ -0.85
TRIM41Q8WV44 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC9.73□□□□□ -0.85
TRIM41Q8WV44 DHFRP3-201ENST00000455595 559 ntBASIC9.73□□□□□ -0.85
TRIM41Q8WV44 AC073610.1-201ENST00000489971 396 ntBASIC9.73□□□□□ -0.85
TRIM41Q8WV44 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC9.73□□□□□ -0.85
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms