Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 ZNF33BP1-201ENST00000452497 1834 ntBASIC5.37□□□□□ -1.55
TMEFF1Q8IYR6 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
TMEFF1Q8IYR6 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC5.37□□□□□ -1.55
TMEFF1Q8IYR6 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
TMEFF1Q8IYR6 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
TMEFF1Q8IYR6 CDC27P2-201ENST00000425026 1922 ntBASIC5.37□□□□□ -1.55
TMEFF1Q8IYR6 AC021242.1-201ENST00000507315 2035 ntBASIC5.37□□□□□ -1.55
TMEFF1Q8IYR6 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
TMEFF1Q8IYR6 Y_RNA.419-201ENST00000384041 102 ntBASIC5.37□□□□□ -1.55
TMEFF1Q8IYR6 MIR320B1-201ENST00000390209 79 ntBASIC5.37□□□□□ -1.55
TMEFF1Q8IYR6 U8.14-201ENST00000390843 143 ntBASIC5.37□□□□□ -1.55
TMEFF1Q8IYR6 RNA5SP487-201ENST00000410186 122 ntBASIC5.37□□□□□ -1.55
TMEFF1Q8IYR6 RNA5SP118-201ENST00000410385 109 ntBASIC5.37□□□□□ -1.55
TMEFF1Q8IYR6 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC5.37□□□□□ -1.55
TMEFF1Q8IYR6 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC5.37□□□□□ -1.55
TMEFF1Q8IYR6 MTND4LP17-201ENST00000414607 293 ntBASIC5.37□□□□□ -1.55
TMEFF1Q8IYR6 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC5.37□□□□□ -1.55
TMEFF1Q8IYR6 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC5.37□□□□□ -1.55
TMEFF1Q8IYR6 PIGFP2-201ENST00000421400 651 ntBASIC5.37□□□□□ -1.55
TMEFF1Q8IYR6 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC5.37□□□□□ -1.55
TMEFF1Q8IYR6 AL360081.1-201ENST00000428299 555 ntBASIC5.37□□□□□ -1.55
TMEFF1Q8IYR6 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC5.37□□□□□ -1.55
TMEFF1Q8IYR6 RPL21P110-201ENST00000433345 446 ntBASIC5.37□□□□□ -1.55
TMEFF1Q8IYR6 AC009961.2-201ENST00000435771 251 ntBASIC5.37□□□□□ -1.55
TMEFF1Q8IYR6 ACTR3P2-201ENST00000439585 1257 ntBASIC5.37□□□□□ -1.55
TMEFF1Q8IYR6 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC5.37□□□□□ -1.55
TMEFF1Q8IYR6 AC140076.1-201ENST00000449897 361 ntBASIC5.37□□□□□ -1.55
TMEFF1Q8IYR6 AL590365.1-201ENST00000450788 243 ntBASIC5.37□□□□□ -1.55
TMEFF1Q8IYR6 HMGB1P28-201ENST00000507778 552 ntBASIC5.37□□□□□ -1.55
TMEFF1Q8IYR6 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC5.37□□□□□ -1.55
TMEFF1Q8IYR6 MTND5P4-201ENST00000514978 288 ntBASIC5.37□□□□□ -1.55
TMEFF1Q8IYR6 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC5.37□□□□□ -1.55
TMEFF1Q8IYR6 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.37□□□□□ -1.55
TMEFF1Q8IYR6 AP003122.4-201ENST00000530980 758 ntBASIC5.37□□□□□ -1.55
TMEFF1Q8IYR6 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.37□□□□□ -1.55
TMEFF1Q8IYR6 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC5.37□□□□□ -1.55
TMEFF1Q8IYR6 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC5.37□□□□□ -1.55
TMEFF1Q8IYR6 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC5.37□□□□□ -1.55
TMEFF1Q8IYR6 AC018552.1-201ENST00000562099 811 ntBASIC5.37□□□□□ -1.55
TMEFF1Q8IYR6 AC107954.1-201ENST00000565906 727 ntBASIC5.37□□□□□ -1.55
TMEFF1Q8IYR6 AC138915.2-201ENST00000569776 97 ntBASIC5.37□□□□□ -1.55
TMEFF1Q8IYR6 MIR3682-201ENST00000581338 84 ntBASIC5.37□□□□□ -1.55
TMEFF1Q8IYR6 MIR548Y-201ENST00000582739 110 ntBASIC5.37□□□□□ -1.55
TMEFF1Q8IYR6 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC5.37□□□□□ -1.55
TMEFF1Q8IYR6 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC5.37□□□□□ -1.55
TMEFF1Q8IYR6 RPL12P25-202ENST00000598100 674 ntBASIC5.37□□□□□ -1.55
TMEFF1Q8IYR6 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC5.37□□□□□ -1.55
TMEFF1Q8IYR6 AC104010.1-201ENST00000616889 150 ntBASIC5.37□□□□□ -1.55
TMEFF1Q8IYR6 AL158801.5-201ENST00000623123 465 ntBASIC5.37□□□□□ -1.55
TMEFF1Q8IYR6 AC099494.2-201ENST00000623371 978 ntBASIC5.37□□□□□ -1.55
TMEFF1Q8IYR6 AC116563.2-201ENST00000624751 535 ntBASIC5.37□□□□□ -1.55
TMEFF1Q8IYR6 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC5.37□□□□□ -1.55
TMEFF1Q8IYR6 MIR7641-1-201ENST00000627518 61 ntBASIC5.37□□□□□ -1.55
TMEFF1Q8IYR6 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
TMEFF1Q8IYR6 CASC19-221ENST00000641309 1382 ntBASIC5.37□□□□□ -1.55
TMEFF1Q8IYR6 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.37□□□□□ -1.55
TMEFF1Q8IYR6 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
TMEFF1Q8IYR6 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.37□□□□□ -1.55
TMEFF1Q8IYR6 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.37□□□□□ -1.55
TMEFF1Q8IYR6 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
TMEFF1Q8IYR6 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
TMEFF1Q8IYR6 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
TMEFF1Q8IYR6 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
TMEFF1Q8IYR6 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
TMEFF1Q8IYR6 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
TMEFF1Q8IYR6 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
TMEFF1Q8IYR6 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
TMEFF1Q8IYR6 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
TMEFF1Q8IYR6 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
TMEFF1Q8IYR6 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
TMEFF1Q8IYR6 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
TMEFF1Q8IYR6 Y_RNA.58-201ENST00000362807 102 ntBASIC5.36□□□□□ -1.55
TMEFF1Q8IYR6 Y_RNA.154-201ENST00000363624 102 ntBASIC5.36□□□□□ -1.55
TMEFF1Q8IYR6 RNU1-85P-201ENST00000364127 164 ntBASIC5.36□□□□□ -1.55
TMEFF1Q8IYR6 RNY3P1-201ENST00000365085 102 ntBASIC5.36□□□□□ -1.55
TMEFF1Q8IYR6 SNORD81.2-201ENST00000365153 76 ntBASIC5.36□□□□□ -1.55
TMEFF1Q8IYR6 RNY3-201ENST00000365484 102 ntBASIC5.36□□□□□ -1.55
TMEFF1Q8IYR6 SUGT1P1-201ENST00000379514 476 ntBASIC5.36□□□□□ -1.55
TMEFF1Q8IYR6 RNU6-98P-201ENST00000384173 107 ntBASIC5.36□□□□□ -1.55
TMEFF1Q8IYR6 Y_RNA.481-201ENST00000384373 102 ntBASIC5.36□□□□□ -1.55
TMEFF1Q8IYR6 Y_RNA.490-201ENST00000384413 102 ntBASIC5.36□□□□□ -1.55
TMEFF1Q8IYR6 MIR105-1-201ENST00000385222 81 ntBASIC5.36□□□□□ -1.55
TMEFF1Q8IYR6 CYB5AP4-201ENST00000396692 399 ntBASIC5.36□□□□□ -1.55
TMEFF1Q8IYR6 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
TMEFF1Q8IYR6 RPS4XP9-201ENST00000405151 780 ntBASIC5.36□□□□□ -1.55
TMEFF1Q8IYR6 AL603766.1-201ENST00000407763 664 ntBASIC5.36□□□□□ -1.55
TMEFF1Q8IYR6 RNU4-64P-201ENST00000410795 131 ntBASIC5.36□□□□□ -1.55
TMEFF1Q8IYR6 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC5.36□□□□□ -1.55
TMEFF1Q8IYR6 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.36□□□□□ -1.55
TMEFF1Q8IYR6 JKAMPP1-201ENST00000413804 919 ntBASIC5.36□□□□□ -1.55
TMEFF1Q8IYR6 AC083875.1-201ENST00000419509 405 ntBASIC5.36□□□□□ -1.55
TMEFF1Q8IYR6 SDCBPP2-201ENST00000424643 885 ntBASIC5.36□□□□□ -1.55
TMEFF1Q8IYR6 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC5.36□□□□□ -1.55
TMEFF1Q8IYR6 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.36□□□□□ -1.55
TMEFF1Q8IYR6 RPL7P56-201ENST00000429441 717 ntBASIC5.36□□□□□ -1.55
TMEFF1Q8IYR6 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC5.36□□□□□ -1.55
TMEFF1Q8IYR6 PRPF38AP2-201ENST00000438179 851 ntBASIC5.36□□□□□ -1.55
TMEFF1Q8IYR6 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC5.36□□□□□ -1.55
TMEFF1Q8IYR6 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC5.36□□□□□ -1.55
TMEFF1Q8IYR6 GAPDHP25-201ENST00000447061 1001 ntBASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms