Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC4.07□□□□□ -1.76
CCDC65Q8IXS2 RPL7P48-201ENST00000461513 746 ntBASIC4.07□□□□□ -1.76
CCDC65Q8IXS2 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC4.07□□□□□ -1.76
CCDC65Q8IXS2 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.07□□□□□ -1.76
CCDC65Q8IXS2 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC4.07□□□□□ -1.76
CCDC65Q8IXS2 RNU6-1004P-201ENST00000516584 111 ntBASIC4.07□□□□□ -1.76
CCDC65Q8IXS2 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC4.07□□□□□ -1.76
CCDC65Q8IXS2 HIGD1AP10-201ENST00000527837 282 ntBASIC4.07□□□□□ -1.76
CCDC65Q8IXS2 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC4.07□□□□□ -1.76
CCDC65Q8IXS2 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC4.07□□□□□ -1.76
CCDC65Q8IXS2 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC4.07□□□□□ -1.76
CCDC65Q8IXS2 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC4.07□□□□□ -1.76
CCDC65Q8IXS2 AC006254.3-201ENST00000603353 884 ntBASIC4.07□□□□□ -1.76
CCDC65Q8IXS2 AC242628.1-201ENST00000606810 391 ntBASIC4.07□□□□□ -1.76
CCDC65Q8IXS2 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC4.07□□□□□ -1.76
CCDC65Q8IXS2 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
CCDC65Q8IXS2 XIST_intron.1-201ENST00000619444 68 ntBASIC4.07□□□□□ -1.76
CCDC65Q8IXS2 AL732372.2-225ENST00000642124 456 ntBASIC4.07□□□□□ -1.76
CCDC65Q8IXS2 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.07□□□□□ -1.76
CCDC65Q8IXS2 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CCDC65Q8IXS2 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
CCDC65Q8IXS2 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
CCDC65Q8IXS2 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC4.07□□□□□ -1.76
CCDC65Q8IXS2 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CCDC65Q8IXS2 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
CCDC65Q8IXS2 SAGE2P-201ENST00000420011 2126 ntBASIC4.06□□□□□ -1.76
CCDC65Q8IXS2 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC4.06□□□□□ -1.76
CCDC65Q8IXS2 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CCDC65Q8IXS2 RNA5SP479-201ENST00000364858 117 ntBASIC4.06□□□□□ -1.76
CCDC65Q8IXS2 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
CCDC65Q8IXS2 RPL7P60-201ENST00000397636 735 ntBASIC4.06□□□□□ -1.76
CCDC65Q8IXS2 Z86062.1-201ENST00000406773 777 ntBASIC4.06□□□□□ -1.76
CCDC65Q8IXS2 MTHFD2P2-201ENST00000407725 247 ntBASIC4.06□□□□□ -1.76
CCDC65Q8IXS2 MIR1193-201ENST00000408109 78 ntBASIC4.06□□□□□ -1.76
CCDC65Q8IXS2 RANP4-201ENST00000413361 655 ntBASIC4.06□□□□□ -1.76
CCDC65Q8IXS2 AL645931.1-201ENST00000439737 410 ntBASIC4.06□□□□□ -1.76
CCDC65Q8IXS2 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC4.06□□□□□ -1.76
CCDC65Q8IXS2 AC023512.1-201ENST00000444513 499 ntBASIC4.06□□□□□ -1.76
CCDC65Q8IXS2 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC4.06□□□□□ -1.76
CCDC65Q8IXS2 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC4.06□□□□□ -1.76
CCDC65Q8IXS2 MTCO3P16-201ENST00000454456 754 ntBASIC4.06□□□□□ -1.76
CCDC65Q8IXS2 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC4.06□□□□□ -1.76
CCDC65Q8IXS2 AL161747.1-201ENST00000480068 358 ntBASIC4.06□□□□□ -1.76
CCDC65Q8IXS2 AC093267.1-201ENST00000489176 961 ntBASIC4.06□□□□□ -1.76
CCDC65Q8IXS2 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC4.06□□□□□ -1.76
CCDC65Q8IXS2 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC4.06□□□□□ -1.76
CCDC65Q8IXS2 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC4.06□□□□□ -1.76
CCDC65Q8IXS2 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC4.06□□□□□ -1.76
CCDC65Q8IXS2 AC026402.1-201ENST00000513642 170 ntBASIC4.06□□□□□ -1.76
CCDC65Q8IXS2 RNU6-1231P-201ENST00000517185 103 ntBASIC4.06□□□□□ -1.76
CCDC65Q8IXS2 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CCDC65Q8IXS2 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC4.06□□□□□ -1.76
CCDC65Q8IXS2 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC4.06□□□□□ -1.76
CCDC65Q8IXS2 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC4.06□□□□□ -1.76
CCDC65Q8IXS2 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC4.06□□□□□ -1.76
CCDC65Q8IXS2 AC067852.4-201ENST00000590314 478 ntBASIC4.06□□□□□ -1.76
CCDC65Q8IXS2 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC4.06□□□□□ -1.76
CCDC65Q8IXS2 AL732618.1-201ENST00000623251 301 ntBASIC4.06□□□□□ -1.76
CCDC65Q8IXS2 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC4.06□□□□□ -1.76
CCDC65Q8IXS2 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC4.06□□□□□ -1.76
CCDC65Q8IXS2 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
CCDC65Q8IXS2 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CCDC65Q8IXS2 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CCDC65Q8IXS2 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CCDC65Q8IXS2 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CCDC65Q8IXS2 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CCDC65Q8IXS2 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
CCDC65Q8IXS2 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
CCDC65Q8IXS2 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC4.05□□□□□ -1.76
CCDC65Q8IXS2 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC4.05□□□□□ -1.76
CCDC65Q8IXS2 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
CCDC65Q8IXS2 MTCO3P31-201ENST00000405526 789 ntBASIC4.05□□□□□ -1.76
CCDC65Q8IXS2 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
CCDC65Q8IXS2 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC4.05□□□□□ -1.76
CCDC65Q8IXS2 AC114814.2-201ENST00000419195 485 ntBASIC4.05□□□□□ -1.76
CCDC65Q8IXS2 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.05□□□□□ -1.76
CCDC65Q8IXS2 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC4.05□□□□□ -1.76
CCDC65Q8IXS2 EIF2S2P3-201ENST00000428356 999 ntBASIC4.05□□□□□ -1.76
CCDC65Q8IXS2 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC4.05□□□□□ -1.76
CCDC65Q8IXS2 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC4.05□□□□□ -1.76
CCDC65Q8IXS2 AC114878.1-201ENST00000441166 358 ntBASIC4.05□□□□□ -1.76
CCDC65Q8IXS2 HMGB3P30-201ENST00000457863 606 ntBASIC4.05□□□□□ -1.76
CCDC65Q8IXS2 AP000893.1-201ENST00000474462 794 ntBASIC4.05□□□□□ -1.76
CCDC65Q8IXS2 AC091959.2-201ENST00000477363 321 ntBASIC4.05□□□□□ -1.76
CCDC65Q8IXS2 NPM1P17-201ENST00000479221 602 ntBASIC4.05□□□□□ -1.76
CCDC65Q8IXS2 RPL23AP73-201ENST00000492507 471 ntBASIC4.05□□□□□ -1.76
CCDC65Q8IXS2 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC4.05□□□□□ -1.76
CCDC65Q8IXS2 AC108157.1-201ENST00000510511 539 ntBASIC4.05□□□□□ -1.76
CCDC65Q8IXS2 AC021146.1-201ENST00000511202 716 ntBASIC4.05□□□□□ -1.76
CCDC65Q8IXS2 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC4.05□□□□□ -1.76
CCDC65Q8IXS2 AC023161.2-201ENST00000551218 780 ntBASIC4.05□□□□□ -1.76
CCDC65Q8IXS2 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC4.05□□□□□ -1.76
CCDC65Q8IXS2 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC4.05□□□□□ -1.76
CCDC65Q8IXS2 AC022146.1-201ENST00000595307 847 ntBASIC4.05□□□□□ -1.76
CCDC65Q8IXS2 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC4.05□□□□□ -1.76
CCDC65Q8IXS2 AC020658.4-201ENST00000613987 684 ntBASIC4.05□□□□□ -1.76
CCDC65Q8IXS2 AK6-205ENST00000618980 483 ntTSL 2 BASIC4.05□□□□□ -1.76
CCDC65Q8IXS2 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CCDC65Q8IXS2 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CCDC65Q8IXS2 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 124.1 ms