Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 AC006946.3-201ENST00000609791 756 ntBASIC2.25□□□□□ -2.05
CSMD3Q7Z407 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC2.25□□□□□ -2.05
CSMD3Q7Z407 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.25□□□□□ -2.05
CSMD3Q7Z407 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC2.24□□□□□ -2.05
CSMD3Q7Z407 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
CSMD3Q7Z407 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC2.24□□□□□ -2.05
CSMD3Q7Z407 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
CSMD3Q7Z407 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
CSMD3Q7Z407 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
CSMD3Q7Z407 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
CSMD3Q7Z407 RNU1-108P-201ENST00000362556 161 ntBASIC2.24□□□□□ -2.05
CSMD3Q7Z407 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
CSMD3Q7Z407 AC019097.1-201ENST00000424783 735 ntBASIC2.24□□□□□ -2.05
CSMD3Q7Z407 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC2.24□□□□□ -2.05
CSMD3Q7Z407 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC2.24□□□□□ -2.05
CSMD3Q7Z407 AC239809.1-201ENST00000450470 217 ntBASIC2.24□□□□□ -2.05
CSMD3Q7Z407 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC2.24□□□□□ -2.05
CSMD3Q7Z407 RN7SKP209-201ENST00000516888 304 ntBASIC2.24□□□□□ -2.05
CSMD3Q7Z407 AC010306.1-201ENST00000523223 1117 ntBASIC2.24□□□□□ -2.05
CSMD3Q7Z407 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC2.24□□□□□ -2.05
CSMD3Q7Z407 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC2.24□□□□□ -2.05
CSMD3Q7Z407 MRPS35P3-201ENST00000603189 709 ntBASIC2.24□□□□□ -2.05
CSMD3Q7Z407 AC243829.7-201ENST00000633081 225 ntBASIC2.24□□□□□ -2.05
CSMD3Q7Z407 AC004972.1-201ENST00000623934 2209 ntBASIC2.24□□□□□ -2.05
CSMD3Q7Z407 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
CSMD3Q7Z407 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC2.24□□□□□ -2.05
CSMD3Q7Z407 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
CSMD3Q7Z407 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC2.24□□□□□ -2.05
CSMD3Q7Z407 FAM35DP-201ENST00000323387 2712 ntBASIC2.24□□□□□ -2.05
CSMD3Q7Z407 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC2.24□□□□□ -2.05
CSMD3Q7Z407 SYF2-202ENST00000354361 926 ntTSL 2 BASIC2.24□□□□□ -2.05
CSMD3Q7Z407 SNORD67-201ENST00000390833 111 ntBASIC2.24□□□□□ -2.05
CSMD3Q7Z407 ATP5F1P6-201ENST00000402768 767 ntBASIC2.24□□□□□ -2.05
CSMD3Q7Z407 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC2.24□□□□□ -2.05
CSMD3Q7Z407 AC087312.1-201ENST00000471411 480 ntBASIC2.24□□□□□ -2.05
CSMD3Q7Z407 RPL21P6-201ENST00000479171 504 ntBASIC2.24□□□□□ -2.05
CSMD3Q7Z407 RN7SL20P-201ENST00000488827 297 ntBASIC2.24□□□□□ -2.05
CSMD3Q7Z407 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC2.24□□□□□ -2.05
CSMD3Q7Z407 AC005798.1-201ENST00000513715 387 ntBASIC2.24□□□□□ -2.05
CSMD3Q7Z407 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC2.24□□□□□ -2.05
CSMD3Q7Z407 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC2.24□□□□□ -2.05
CSMD3Q7Z407 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
CSMD3Q7Z407 AL078595.2-201ENST00000605309 1780 ntBASIC2.24□□□□□ -2.05
CSMD3Q7Z407 CPS1-201ENST00000233072 5821 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
CSMD3Q7Z407 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
CSMD3Q7Z407 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC2.24□□□□□ -2.05
CSMD3Q7Z407 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC2.24□□□□□ -2.05
CSMD3Q7Z407 AL136097.1-201ENST00000456945 913 ntBASIC2.24□□□□□ -2.05
CSMD3Q7Z407 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC2.24□□□□□ -2.05
CSMD3Q7Z407 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.24□□□□□ -2.05
CSMD3Q7Z407 RNA5SP356-201ENST00000515972 94 ntBASIC2.24□□□□□ -2.05
CSMD3Q7Z407 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC2.24□□□□□ -2.05
CSMD3Q7Z407 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
CSMD3Q7Z407 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
CSMD3Q7Z407 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
CSMD3Q7Z407 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
CSMD3Q7Z407 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
CSMD3Q7Z407 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC2.23□□□□□ -2.05
CSMD3Q7Z407 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC2.23□□□□□ -2.05
CSMD3Q7Z407 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
CSMD3Q7Z407 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC2.23□□□□□ -2.05
CSMD3Q7Z407 OR4R3P-201ENST00000525084 838 ntBASIC2.23□□□□□ -2.05
CSMD3Q7Z407 UBL5P2-201ENST00000583788 219 ntBASIC2.23□□□□□ -2.05
CSMD3Q7Z407 OR6R2P-201ENST00000609216 300 ntBASIC2.23□□□□□ -2.05
CSMD3Q7Z407 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC2.23□□□□□ -2.05
CSMD3Q7Z407 AC063952.1-203ENST00000634410 658 ntBASIC2.23□□□□□ -2.05
CSMD3Q7Z407 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
CSMD3Q7Z407 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.23□□□□□ -2.05
CSMD3Q7Z407 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.23□□□□□ -2.05
CSMD3Q7Z407 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC2.23□□□□□ -2.05
CSMD3Q7Z407 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC2.23□□□□□ -2.05
CSMD3Q7Z407 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC2.23□□□□□ -2.05
CSMD3Q7Z407 LINC02471-203ENST00000641941 4752 ntBASIC2.23□□□□□ -2.05
CSMD3Q7Z407 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
CSMD3Q7Z407 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC2.23□□□□□ -2.05
CSMD3Q7Z407 AL391417.1-201ENST00000404100 426 ntBASIC2.23□□□□□ -2.05
CSMD3Q7Z407 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC2.23□□□□□ -2.05
CSMD3Q7Z407 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC2.23□□□□□ -2.05
CSMD3Q7Z407 ARL6IP1P2-201ENST00000431356 563 ntBASIC2.23□□□□□ -2.05
CSMD3Q7Z407 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
CSMD3Q7Z407 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC2.23□□□□□ -2.05
CSMD3Q7Z407 AP000926.4-201ENST00000527351 454 ntBASIC2.23□□□□□ -2.05
CSMD3Q7Z407 AL139174.1-201ENST00000531489 886 ntBASIC2.23□□□□□ -2.05
CSMD3Q7Z407 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC2.23□□□□□ -2.05
CSMD3Q7Z407 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC2.23□□□□□ -2.05
CSMD3Q7Z407 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
CSMD3Q7Z407 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC2.23□□□□□ -2.05
CSMD3Q7Z407 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
CSMD3Q7Z407 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC2.23□□□□□ -2.05
CSMD3Q7Z407 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
CSMD3Q7Z407 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
CSMD3Q7Z407 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC2.23□□□□□ -2.05
CSMD3Q7Z407 Y_RNA.226-201ENST00000364337 114 ntBASIC2.22□□□□□ -2.05
CSMD3Q7Z407 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
CSMD3Q7Z407 Y_RNA.466-201ENST00000384294 113 ntBASIC2.22□□□□□ -2.05
CSMD3Q7Z407 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.22□□□□□ -2.05
CSMD3Q7Z407 ANXA2P1-201ENST00000505539 926 ntBASIC2.22□□□□□ -2.05
CSMD3Q7Z407 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC2.22□□□□□ -2.05
CSMD3Q7Z407 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC2.22□□□□□ -2.05
CSMD3Q7Z407 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC2.22□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 137.2 ms