Protein–RNA interactions for Protein: Q6ZR62

RTL4, Retrotransposon Gag-like protein 4, humanhuman

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL4Q6ZR62 AL354760.1-201ENST00000608357 643 ntBASIC3.53□□□□□ -1.84
RTL4Q6ZR62 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.53□□□□□ -1.84
RTL4Q6ZR62 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.53□□□□□ -1.84
RTL4Q6ZR62 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.53□□□□□ -1.84
RTL4Q6ZR62 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC3.53□□□□□ -1.84
RTL4Q6ZR62 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC3.53□□□□□ -1.84
RTL4Q6ZR62 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
RTL4Q6ZR62 AC119674.1-220ENST00000641502 1048 ntBASIC3.53□□□□□ -1.84
RTL4Q6ZR62 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.53□□□□□ -1.84
RTL4Q6ZR62 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
RTL4Q6ZR62 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.53□□□□□ -1.84
RTL4Q6ZR62 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.53□□□□□ -1.84
RTL4Q6ZR62 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
RTL4Q6ZR62 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.53□□□□□ -1.85
RTL4Q6ZR62 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.53□□□□□ -1.85
RTL4Q6ZR62 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC3.52□□□□□ -1.85
RTL4Q6ZR62 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
RTL4Q6ZR62 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
RTL4Q6ZR62 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
RTL4Q6ZR62 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
RTL4Q6ZR62 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC3.52□□□□□ -1.85
RTL4Q6ZR62 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
RTL4Q6ZR62 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC3.52□□□□□ -1.85
RTL4Q6ZR62 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC3.52□□□□□ -1.85
RTL4Q6ZR62 AL139247.1-201ENST00000422768 325 ntBASIC3.52□□□□□ -1.85
RTL4Q6ZR62 AL591419.1-201ENST00000427423 339 ntBASIC3.52□□□□□ -1.85
RTL4Q6ZR62 SETP5-201ENST00000437270 562 ntBASIC3.52□□□□□ -1.85
RTL4Q6ZR62 RPS7P5-201ENST00000441482 581 ntBASIC3.52□□□□□ -1.85
RTL4Q6ZR62 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.52□□□□□ -1.85
RTL4Q6ZR62 NOTCH2P1-201ENST00000443481 624 ntBASIC3.52□□□□□ -1.85
RTL4Q6ZR62 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC3.52□□□□□ -1.85
RTL4Q6ZR62 HMGB3P8-201ENST00000449709 577 ntBASIC3.52□□□□□ -1.85
RTL4Q6ZR62 AP002345.1-201ENST00000456493 928 ntBASIC3.52□□□□□ -1.85
RTL4Q6ZR62 RNU7-27P-201ENST00000459281 62 ntBASIC3.52□□□□□ -1.85
RTL4Q6ZR62 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
RTL4Q6ZR62 RPL21P129-201ENST00000491732 478 ntBASIC3.52□□□□□ -1.85
RTL4Q6ZR62 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC3.52□□□□□ -1.85
RTL4Q6ZR62 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.52□□□□□ -1.85
RTL4Q6ZR62 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.52□□□□□ -1.85
RTL4Q6ZR62 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC3.52□□□□□ -1.85
RTL4Q6ZR62 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC3.52□□□□□ -1.85
RTL4Q6ZR62 AC008083.2-201ENST00000546707 476 ntBASIC3.52□□□□□ -1.85
RTL4Q6ZR62 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.52□□□□□ -1.85
RTL4Q6ZR62 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC3.52□□□□□ -1.85
RTL4Q6ZR62 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.52□□□□□ -1.85
RTL4Q6ZR62 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC3.52□□□□□ -1.85
RTL4Q6ZR62 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.52□□□□□ -1.85
RTL4Q6ZR62 BRDTP1-201ENST00000605735 677 ntBASIC3.52□□□□□ -1.85
RTL4Q6ZR62 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
RTL4Q6ZR62 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
RTL4Q6ZR62 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.52□□□□□ -1.85
RTL4Q6ZR62 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
RTL4Q6ZR62 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.51□□□□□ -1.85
RTL4Q6ZR62 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
RTL4Q6ZR62 AC006504.1-201ENST00000562493 3666 ntBASIC3.51□□□□□ -1.85
RTL4Q6ZR62 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
RTL4Q6ZR62 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
RTL4Q6ZR62 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC3.51□□□□□ -1.85
RTL4Q6ZR62 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
RTL4Q6ZR62 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
RTL4Q6ZR62 RNU6-666P-201ENST00000363499 107 ntBASIC3.51□□□□□ -1.85
RTL4Q6ZR62 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
RTL4Q6ZR62 SNORA48.7-201ENST00000391302 135 ntBASIC3.51□□□□□ -1.85
RTL4Q6ZR62 PTMAP2-201ENST00000397627 327 ntBASIC3.51□□□□□ -1.85
RTL4Q6ZR62 MTCO3P31-201ENST00000405526 789 ntBASIC3.51□□□□□ -1.85
RTL4Q6ZR62 RFESDP1-201ENST00000422350 461 ntBASIC3.51□□□□□ -1.85
RTL4Q6ZR62 AL390879.2-203ENST00000426943 1121 ntBASIC3.51□□□□□ -1.85
RTL4Q6ZR62 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.51□□□□□ -1.85
RTL4Q6ZR62 AC018644.1-201ENST00000429934 551 ntBASIC3.51□□□□□ -1.85
RTL4Q6ZR62 Z74696.2-201ENST00000436514 498 ntBASIC3.51□□□□□ -1.85
RTL4Q6ZR62 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.51□□□□□ -1.85
RTL4Q6ZR62 SETD6P1-201ENST00000444575 317 ntBASIC3.51□□□□□ -1.85
RTL4Q6ZR62 AL133547.1-201ENST00000448546 220 ntBASIC3.51□□□□□ -1.85
RTL4Q6ZR62 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC3.51□□□□□ -1.85
RTL4Q6ZR62 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.51□□□□□ -1.85
RTL4Q6ZR62 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.51□□□□□ -1.85
RTL4Q6ZR62 AL035404.1-201ENST00000497982 568 ntBASIC3.51□□□□□ -1.85
RTL4Q6ZR62 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.51□□□□□ -1.85
RTL4Q6ZR62 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC3.51□□□□□ -1.85
RTL4Q6ZR62 AC022695.1-201ENST00000522089 237 ntBASIC3.51□□□□□ -1.85
RTL4Q6ZR62 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
RTL4Q6ZR62 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
RTL4Q6ZR62 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.51□□□□□ -1.85
RTL4Q6ZR62 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC3.51□□□□□ -1.85
RTL4Q6ZR62 AL133457.1-201ENST00000564251 987 ntBASIC3.51□□□□□ -1.85
RTL4Q6ZR62 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.51□□□□□ -1.85
RTL4Q6ZR62 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.51□□□□□ -1.85
RTL4Q6ZR62 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.51□□□□□ -1.85
RTL4Q6ZR62 AL390816.3-201ENST00000604527 1066 ntBASIC3.51□□□□□ -1.85
RTL4Q6ZR62 AC245389.1-201ENST00000605141 529 ntBASIC3.51□□□□□ -1.85
RTL4Q6ZR62 AC135803.1-201ENST00000608748 565 ntBASIC3.51□□□□□ -1.85
RTL4Q6ZR62 AC008121.2-201ENST00000614647 523 ntBASIC3.51□□□□□ -1.85
RTL4Q6ZR62 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
RTL4Q6ZR62 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
RTL4Q6ZR62 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
RTL4Q6ZR62 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC3.51□□□□□ -1.85
RTL4Q6ZR62 AC005183.1-201ENST00000603687 1979 ntBASIC3.51□□□□□ -1.85
RTL4Q6ZR62 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
RTL4Q6ZR62 MTCO1P8-201ENST00000416914 1523 ntBASIC3.5□□□□□ -1.85
RTL4Q6ZR62 CR381670.1-201ENST00000624291 1693 ntBASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms