Protein–RNA interactions for Protein: Q3SYG4

BBS9, Protein PTHB1, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS9Q3SYG4 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
BBS9Q3SYG4 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
BBS9Q3SYG4 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.67□□□□□ -1.5
BBS9Q3SYG4 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
BBS9Q3SYG4 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
BBS9Q3SYG4 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
BBS9Q3SYG4 CASC19-221ENST00000641309 1382 ntBASIC5.67□□□□□ -1.5
BBS9Q3SYG4 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
BBS9Q3SYG4 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.66□□□□□ -1.5
BBS9Q3SYG4 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.66□□□□□ -1.5
BBS9Q3SYG4 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.66□□□□□ -1.5
BBS9Q3SYG4 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
BBS9Q3SYG4 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
BBS9Q3SYG4 AL606537.1-201ENST00000607258 2011 ntBASIC5.66□□□□□ -1.5
BBS9Q3SYG4 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
BBS9Q3SYG4 GNG5P1-201ENST00000255500 204 ntBASIC5.66□□□□□ -1.5
BBS9Q3SYG4 RPL23AP57-201ENST00000332361 466 ntBASIC5.66□□□□□ -1.5
BBS9Q3SYG4 RNU6-1103P-201ENST00000384150 107 ntBASIC5.66□□□□□ -1.5
BBS9Q3SYG4 MIR649-201ENST00000384843 97 ntBASIC5.66□□□□□ -1.5
BBS9Q3SYG4 AC016769.3-201ENST00000396562 315 ntBASIC5.66□□□□□ -1.5
BBS9Q3SYG4 ARF4P3-201ENST00000397387 509 ntBASIC5.66□□□□□ -1.5
BBS9Q3SYG4 RPS20P2-201ENST00000402520 389 ntBASIC5.66□□□□□ -1.5
BBS9Q3SYG4 AL009179.1-201ENST00000406085 265 ntBASIC5.66□□□□□ -1.5
BBS9Q3SYG4 RNA5SP296-201ENST00000410523 111 ntBASIC5.66□□□□□ -1.5
BBS9Q3SYG4 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC5.66□□□□□ -1.5
BBS9Q3SYG4 ZNF90P2-204ENST00000419323 1075 ntBASIC5.66□□□□□ -1.5
BBS9Q3SYG4 AL589872.1-201ENST00000426602 288 ntBASIC5.66□□□□□ -1.5
BBS9Q3SYG4 RPL31P35-201ENST00000431058 377 ntBASIC5.66□□□□□ -1.5
BBS9Q3SYG4 RPEP2-201ENST00000432149 701 ntBASIC5.66□□□□□ -1.5
BBS9Q3SYG4 AC104850.1-201ENST00000435940 476 ntBASIC5.66□□□□□ -1.5
BBS9Q3SYG4 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC5.66□□□□□ -1.5
BBS9Q3SYG4 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC5.66□□□□□ -1.5
BBS9Q3SYG4 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC5.66□□□□□ -1.5
BBS9Q3SYG4 RPL17P49-201ENST00000443728 411 ntBASIC5.66□□□□□ -1.5
BBS9Q3SYG4 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.66□□□□□ -1.5
BBS9Q3SYG4 HIGD1AP8-201ENST00000453927 274 ntBASIC5.66□□□□□ -1.5
BBS9Q3SYG4 PMCHL2-203ENST00000457791 237 ntBASIC5.66□□□□□ -1.5
BBS9Q3SYG4 RPL31P50-201ENST00000471002 296 ntBASIC5.66□□□□□ -1.5
BBS9Q3SYG4 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
BBS9Q3SYG4 RPS17P15-201ENST00000475609 349 ntBASIC5.66□□□□□ -1.5
BBS9Q3SYG4 RPS29P25-201ENST00000481709 171 ntBASIC5.66□□□□□ -1.5
BBS9Q3SYG4 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC5.66□□□□□ -1.5
BBS9Q3SYG4 Y_RNA.693-201ENST00000516641 110 ntBASIC5.66□□□□□ -1.5
BBS9Q3SYG4 snoU109.6-201ENST00000516831 118 ntBASIC5.66□□□□□ -1.5
BBS9Q3SYG4 CENPUP1-201ENST00000526649 1202 ntBASIC5.66□□□□□ -1.5
BBS9Q3SYG4 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC5.66□□□□□ -1.5
BBS9Q3SYG4 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
BBS9Q3SYG4 AL359212.1-201ENST00000556608 614 ntBASIC5.66□□□□□ -1.5
BBS9Q3SYG4 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC5.66□□□□□ -1.5
BBS9Q3SYG4 AC093591.2-201ENST00000565254 3843 ntBASIC5.66□□□□□ -1.5
BBS9Q3SYG4 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
BBS9Q3SYG4 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
BBS9Q3SYG4 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
BBS9Q3SYG4 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC5.66□□□□□ -1.5
BBS9Q3SYG4 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC5.66□□□□□ -1.5
BBS9Q3SYG4 RPL27-207ENST00000590864 569 ntTSL 2 BASIC5.66□□□□□ -1.5
BBS9Q3SYG4 AL359999.1-201ENST00000604513 294 ntBASIC5.66□□□□□ -1.5
BBS9Q3SYG4 AC009159.1-201ENST00000618386 642 ntBASIC5.66□□□□□ -1.5
BBS9Q3SYG4 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC5.66□□□□□ -1.5
BBS9Q3SYG4 AL732618.1-201ENST00000623251 301 ntBASIC5.66□□□□□ -1.5
BBS9Q3SYG4 AC006065.6-201ENST00000625201 545 ntBASIC5.66□□□□□ -1.5
BBS9Q3SYG4 AC024614.3-201ENST00000637860 256 ntBASIC5.66□□□□□ -1.5
BBS9Q3SYG4 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.66□□□□□ -1.5
BBS9Q3SYG4 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.66□□□□□ -1.5
BBS9Q3SYG4 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
BBS9Q3SYG4 SOCS5P3-201ENST00000425115 1576 ntBASIC5.66□□□□□ -1.5
BBS9Q3SYG4 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.66□□□□□ -1.5
BBS9Q3SYG4 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
BBS9Q3SYG4 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
BBS9Q3SYG4 AC083899.1-201ENST00000454465 3819 ntBASIC5.66□□□□□ -1.5
BBS9Q3SYG4 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.66□□□□□ -1.5
BBS9Q3SYG4 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
BBS9Q3SYG4 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.66□□□□□ -1.5
BBS9Q3SYG4 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
BBS9Q3SYG4 AC097461.1-201ENST00000568928 2821 ntBASIC5.66□□□□□ -1.5
BBS9Q3SYG4 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
BBS9Q3SYG4 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
BBS9Q3SYG4 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.65□□□□□ -1.5
BBS9Q3SYG4 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
BBS9Q3SYG4 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.65□□□□□ -1.5
BBS9Q3SYG4 ZNF33BP1-201ENST00000452497 1834 ntBASIC5.65□□□□□ -1.5
BBS9Q3SYG4 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
BBS9Q3SYG4 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
BBS9Q3SYG4 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.65□□□□□ -1.5
BBS9Q3SYG4 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.65□□□□□ -1.5
BBS9Q3SYG4 OR9K1P-201ENST00000326513 941 ntBASIC5.65□□□□□ -1.5
BBS9Q3SYG4 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
BBS9Q3SYG4 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
BBS9Q3SYG4 RNA5SP477-201ENST00000362639 119 ntBASIC5.65□□□□□ -1.5
BBS9Q3SYG4 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
BBS9Q3SYG4 SNORD56.6-201ENST00000384569 71 ntBASIC5.65□□□□□ -1.5
BBS9Q3SYG4 AC004386.1-201ENST00000393214 761 ntBASIC5.65□□□□□ -1.5
BBS9Q3SYG4 RPL31P1-201ENST00000398116 372 ntBASIC5.65□□□□□ -1.5
BBS9Q3SYG4 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC5.65□□□□□ -1.5
BBS9Q3SYG4 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC5.65□□□□□ -1.5
BBS9Q3SYG4 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC5.65□□□□□ -1.5
BBS9Q3SYG4 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.65□□□□□ -1.5
BBS9Q3SYG4 AC002486.1-201ENST00000435098 391 ntBASIC5.65□□□□□ -1.5
BBS9Q3SYG4 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC5.65□□□□□ -1.5
BBS9Q3SYG4 AC002381.1-201ENST00000447049 280 ntBASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms