Protein–RNA interactions for Protein: Q3LFD5

USP41, Putative ubiquitin carboxyl-terminal hydrolase 41, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP41Q3LFD5 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC4.54□□□□□ -1.68
USP41Q3LFD5 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
USP41Q3LFD5 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC4.54□□□□□ -1.68
USP41Q3LFD5 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.54□□□□□ -1.68
USP41Q3LFD5 RPL23AP97-201ENST00000568955 471 ntBASIC4.54□□□□□ -1.68
USP41Q3LFD5 MTND3P13-201ENST00000574391 343 ntBASIC4.54□□□□□ -1.68
USP41Q3LFD5 BPTFP1-201ENST00000579209 492 ntBASIC4.54□□□□□ -1.68
USP41Q3LFD5 AC015688.2-201ENST00000584523 262 ntBASIC4.54□□□□□ -1.68
USP41Q3LFD5 AC022916.3-201ENST00000592961 742 ntBASIC4.54□□□□□ -1.68
USP41Q3LFD5 AL035411.2-201ENST00000604022 421 ntBASIC4.54□□□□□ -1.68
USP41Q3LFD5 AC093424.1-201ENST00000604999 338 ntBASIC4.54□□□□□ -1.68
USP41Q3LFD5 AC009159.2-201ENST00000617603 606 ntBASIC4.54□□□□□ -1.68
USP41Q3LFD5 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
USP41Q3LFD5 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC4.54□□□□□ -1.68
USP41Q3LFD5 AC034229.5-201ENST00000624258 185 ntBASIC4.54□□□□□ -1.68
USP41Q3LFD5 OR1S1-201ENST00000624470 978 ntBASIC4.54□□□□□ -1.68
USP41Q3LFD5 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC4.54□□□□□ -1.68
USP41Q3LFD5 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
USP41Q3LFD5 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.54□□□□□ -1.68
USP41Q3LFD5 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
USP41Q3LFD5 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.54□□□□□ -1.68
USP41Q3LFD5 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
USP41Q3LFD5 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
USP41Q3LFD5 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
USP41Q3LFD5 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.53□□□□□ -1.68
USP41Q3LFD5 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
USP41Q3LFD5 AL118496.1-201ENST00000440201 1812 ntBASIC4.53□□□□□ -1.68
USP41Q3LFD5 AC090971.4-201ENST00000560291 1800 ntBASIC4.53□□□□□ -1.68
USP41Q3LFD5 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
USP41Q3LFD5 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
USP41Q3LFD5 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
USP41Q3LFD5 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
USP41Q3LFD5 RNA5SP130-201ENST00000364431 114 ntBASIC4.53□□□□□ -1.68
USP41Q3LFD5 RHOT1P2-201ENST00000366423 333 ntBASIC4.53□□□□□ -1.68
USP41Q3LFD5 RNU1-44P-201ENST00000384453 163 ntBASIC4.53□□□□□ -1.68
USP41Q3LFD5 MIR513B-201ENST00000385136 84 ntBASIC4.53□□□□□ -1.68
USP41Q3LFD5 RNU6-1242P-201ENST00000391052 103 ntBASIC4.53□□□□□ -1.68
USP41Q3LFD5 SNORA48.7-201ENST00000391302 135 ntBASIC4.53□□□□□ -1.68
USP41Q3LFD5 ENSAP1-201ENST00000392855 326 ntBASIC4.53□□□□□ -1.68
USP41Q3LFD5 AL079342.2-201ENST00000403367 482 ntBASIC4.53□□□□□ -1.68
USP41Q3LFD5 SFR1P1-201ENST00000403720 688 ntBASIC4.53□□□□□ -1.68
USP41Q3LFD5 AL078604.1-201ENST00000404609 466 ntBASIC4.53□□□□□ -1.68
USP41Q3LFD5 RNA5SP104-201ENST00000410989 118 ntBASIC4.53□□□□□ -1.68
USP41Q3LFD5 AL513175.2-201ENST00000422071 443 ntBASIC4.53□□□□□ -1.68
USP41Q3LFD5 RPS12P5-201ENST00000423449 371 ntBASIC4.53□□□□□ -1.68
USP41Q3LFD5 RPEP2-201ENST00000432149 701 ntBASIC4.53□□□□□ -1.68
USP41Q3LFD5 NANOGP2-201ENST00000435391 727 ntBASIC4.53□□□□□ -1.68
USP41Q3LFD5 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.53□□□□□ -1.68
USP41Q3LFD5 AL353748.1-201ENST00000440753 474 ntBASIC4.53□□□□□ -1.68
USP41Q3LFD5 CR769776.1-201ENST00000441254 787 ntBASIC4.53□□□□□ -1.68
USP41Q3LFD5 TPTE2P3-201ENST00000441562 1189 ntBASIC4.53□□□□□ -1.68
USP41Q3LFD5 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC4.53□□□□□ -1.68
USP41Q3LFD5 RPL21P89-201ENST00000444021 467 ntBASIC4.53□□□□□ -1.68
USP41Q3LFD5 AL162151.2-201ENST00000448875 158 ntBASIC4.53□□□□□ -1.68
USP41Q3LFD5 MRPL42P4-201ENST00000453267 443 ntBASIC4.53□□□□□ -1.68
USP41Q3LFD5 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC4.53□□□□□ -1.68
USP41Q3LFD5 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.53□□□□□ -1.68
USP41Q3LFD5 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
USP41Q3LFD5 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC4.53□□□□□ -1.68
USP41Q3LFD5 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC4.53□□□□□ -1.68
USP41Q3LFD5 HMGB3P13-201ENST00000511263 607 ntBASIC4.53□□□□□ -1.68
USP41Q3LFD5 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
USP41Q3LFD5 AC108064.1-201ENST00000513791 460 ntBASIC4.53□□□□□ -1.68
USP41Q3LFD5 AC008494.2-201ENST00000514544 370 ntBASIC4.53□□□□□ -1.68
USP41Q3LFD5 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC4.53□□□□□ -1.68
USP41Q3LFD5 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.53□□□□□ -1.68
USP41Q3LFD5 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC4.53□□□□□ -1.68
USP41Q3LFD5 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.53□□□□□ -1.68
USP41Q3LFD5 AC092747.2-201ENST00000545069 983 ntBASIC4.53□□□□□ -1.68
USP41Q3LFD5 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC4.53□□□□□ -1.68
USP41Q3LFD5 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC4.53□□□□□ -1.68
USP41Q3LFD5 AC023813.2-201ENST00000564321 469 ntBASIC4.53□□□□□ -1.68
USP41Q3LFD5 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC4.53□□□□□ -1.68
USP41Q3LFD5 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC4.53□□□□□ -1.68
USP41Q3LFD5 MIR4286-201ENST00000580651 93 ntBASIC4.53□□□□□ -1.68
USP41Q3LFD5 CCDC58P3-201ENST00000590792 430 ntBASIC4.53□□□□□ -1.68
USP41Q3LFD5 VN1R83P-201ENST00000595685 445 ntBASIC4.53□□□□□ -1.68
USP41Q3LFD5 AL020997.3-201ENST00000602843 359 ntBASIC4.53□□□□□ -1.68
USP41Q3LFD5 AC022022.2-201ENST00000602989 360 ntBASIC4.53□□□□□ -1.68
USP41Q3LFD5 AC008638.3-201ENST00000603341 463 ntBASIC4.53□□□□□ -1.68
USP41Q3LFD5 MTND3P19-201ENST00000603825 345 ntBASIC4.53□□□□□ -1.68
USP41Q3LFD5 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC4.53□□□□□ -1.68
USP41Q3LFD5 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC4.53□□□□□ -1.68
USP41Q3LFD5 AP005137.2-201ENST00000609238 400 ntBASIC4.53□□□□□ -1.68
USP41Q3LFD5 AL592148.2-201ENST00000612210 372 ntBASIC4.53□□□□□ -1.68
USP41Q3LFD5 AC109809.1-201ENST00000619665 545 ntBASIC4.53□□□□□ -1.68
USP41Q3LFD5 AC013470.4-201ENST00000619978 986 ntBASIC4.53□□□□□ -1.68
USP41Q3LFD5 AC090897.3-201ENST00000636973 1157 ntBASIC4.53□□□□□ -1.68
USP41Q3LFD5 LINC02211-204ENST00000642024 1070 ntBASIC4.53□□□□□ -1.68
USP41Q3LFD5 AC093535.2-201ENST00000624769 2326 ntBASIC4.53□□□□□ -1.68
USP41Q3LFD5 AC134882.1-201ENST00000603738 1676 ntBASIC4.53□□□□□ -1.68
USP41Q3LFD5 ASNSP1-204ENST00000641977 1664 ntBASIC4.53□□□□□ -1.68
USP41Q3LFD5 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
USP41Q3LFD5 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.53□□□□□ -1.68
USP41Q3LFD5 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
USP41Q3LFD5 SGO1P1-201ENST00000603525 1447 ntBASIC4.53□□□□□ -1.68
USP41Q3LFD5 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC4.53□□□□□ -1.69
USP41Q3LFD5 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
USP41Q3LFD5 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
USP41Q3LFD5 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms