Protein–RNA interactions for Protein: Q15475

SIX1, Homeobox protein SIX1, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1Q15475 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.89□□□□□ -1.79
SIX1Q15475 MTND4P11-201ENST00000417020 1058 ntBASIC3.89□□□□□ -1.79
SIX1Q15475 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC3.89□□□□□ -1.79
SIX1Q15475 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC3.89□□□□□ -1.79
SIX1Q15475 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.89□□□□□ -1.79
SIX1Q15475 RPL7P28-201ENST00000437739 740 ntBASIC3.89□□□□□ -1.79
SIX1Q15475 MED6P1-201ENST00000439659 713 ntBASIC3.89□□□□□ -1.79
SIX1Q15475 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.89□□□□□ -1.79
SIX1Q15475 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC3.89□□□□□ -1.79
SIX1Q15475 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.89□□□□□ -1.79
SIX1Q15475 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC3.89□□□□□ -1.79
SIX1Q15475 GTF2IP12-201ENST00000456547 356 ntBASIC3.89□□□□□ -1.79
SIX1Q15475 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.89□□□□□ -1.79
SIX1Q15475 UBDP1-202ENST00000457888 382 ntBASIC3.89□□□□□ -1.79
SIX1Q15475 UBA52P3-201ENST00000491303 382 ntBASIC3.89□□□□□ -1.79
SIX1Q15475 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC3.89□□□□□ -1.79
SIX1Q15475 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.89□□□□□ -1.79
SIX1Q15475 OR5AP1P-201ENST00000529730 940 ntBASIC3.89□□□□□ -1.79
SIX1Q15475 AC025260.1-201ENST00000548858 430 ntBASIC3.89□□□□□ -1.79
SIX1Q15475 AC022884.3-201ENST00000579571 248 ntBASIC3.89□□□□□ -1.79
SIX1Q15475 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC3.89□□□□□ -1.79
SIX1Q15475 MIR4760-201ENST00000585040 80 ntBASIC3.89□□□□□ -1.79
SIX1Q15475 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC3.89□□□□□ -1.79
SIX1Q15475 KLKP1-201ENST00000595979 403 ntBASIC3.89□□□□□ -1.79
SIX1Q15475 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC3.89□□□□□ -1.79
SIX1Q15475 IGKV1OR2-118-201ENST00000603238 347 ntBASIC3.89□□□□□ -1.79
SIX1Q15475 AL591034.3-201ENST00000605511 685 ntBASIC3.89□□□□□ -1.79
SIX1Q15475 AC018754.1-201ENST00000607486 925 ntBASIC3.89□□□□□ -1.79
SIX1Q15475 AC017076.1-201ENST00000607613 578 ntBASIC3.89□□□□□ -1.79
SIX1Q15475 ZYXP1-201ENST00000617638 118 ntBASIC3.89□□□□□ -1.79
SIX1Q15475 AC073569.3-201ENST00000619055 682 ntBASIC3.89□□□□□ -1.79
SIX1Q15475 AC084824.4-201ENST00000620106 731 ntBASIC3.89□□□□□ -1.79
SIX1Q15475 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC3.89□□□□□ -1.79
SIX1Q15475 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
SIX1Q15475 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC3.89□□□□□ -1.79
SIX1Q15475 RPS4XP5-202ENST00000449995 1334 ntBASIC3.89□□□□□ -1.79
SIX1Q15475 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
SIX1Q15475 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC3.89□□□□□ -1.79
SIX1Q15475 ZNF849P-201ENST00000594711 1566 ntBASIC3.89□□□□□ -1.79
SIX1Q15475 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SIX1Q15475 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
SIX1Q15475 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC3.88□□□□□ -1.79
SIX1Q15475 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SIX1Q15475 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
SIX1Q15475 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.88□□□□□ -1.79
SIX1Q15475 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
SIX1Q15475 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
SIX1Q15475 AP000568.1-201ENST00000282964 442 ntBASIC3.88□□□□□ -1.79
SIX1Q15475 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SIX1Q15475 SNORA62.2-201ENST00000364672 152 ntBASIC3.88□□□□□ -1.79
SIX1Q15475 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC3.88□□□□□ -1.79
SIX1Q15475 RNU6-213P-201ENST00000384051 104 ntBASIC3.88□□□□□ -1.79
SIX1Q15475 SNORA57.1-201ENST00000391227 145 ntBASIC3.88□□□□□ -1.79
SIX1Q15475 HMGB3P18-201ENST00000406327 590 ntBASIC3.88□□□□□ -1.79
SIX1Q15475 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC3.88□□□□□ -1.79
SIX1Q15475 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.88□□□□□ -1.79
SIX1Q15475 SLC4A1APP1-201ENST00000419995 602 ntBASIC3.88□□□□□ -1.79
SIX1Q15475 SFR1P2-201ENST00000421841 730 ntBASIC3.88□□□□□ -1.79
SIX1Q15475 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC3.88□□□□□ -1.79
SIX1Q15475 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC3.88□□□□□ -1.79
SIX1Q15475 RPS26P47-201ENST00000427219 348 ntBASIC3.88□□□□□ -1.79
SIX1Q15475 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC3.88□□□□□ -1.79
SIX1Q15475 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.88□□□□□ -1.79
SIX1Q15475 AC000041.1-201ENST00000439655 175 ntBASIC3.88□□□□□ -1.79
SIX1Q15475 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC3.88□□□□□ -1.79
SIX1Q15475 AC022431.1-201ENST00000450941 438 ntBASIC3.88□□□□□ -1.79
SIX1Q15475 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC3.88□□□□□ -1.79
SIX1Q15475 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC3.88□□□□□ -1.79
SIX1Q15475 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC3.88□□□□□ -1.79
SIX1Q15475 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC3.88□□□□□ -1.79
SIX1Q15475 AC110792.1-201ENST00000491826 472 ntBASIC3.88□□□□□ -1.79
SIX1Q15475 PRELID3BP6-201ENST00000503839 571 ntBASIC3.88□□□□□ -1.79
SIX1Q15475 SUMO2P5-201ENST00000506790 245 ntBASIC3.88□□□□□ -1.79
SIX1Q15475 AC010376.1-201ENST00000522101 334 ntBASIC3.88□□□□□ -1.79
SIX1Q15475 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC3.88□□□□□ -1.79
SIX1Q15475 AC118942.1-201ENST00000529674 1035 ntBASIC3.88□□□□□ -1.79
SIX1Q15475 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC3.88□□□□□ -1.79
SIX1Q15475 ZKSCAN7P1-201ENST00000543668 673 ntBASIC3.88□□□□□ -1.79
SIX1Q15475 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.88□□□□□ -1.79
SIX1Q15475 AC011611.5-201ENST00000552477 578 ntBASIC3.88□□□□□ -1.79
SIX1Q15475 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC3.88□□□□□ -1.79
SIX1Q15475 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.88□□□□□ -1.79
SIX1Q15475 MIR4789-201ENST00000577469 82 ntBASIC3.88□□□□□ -1.79
SIX1Q15475 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC3.88□□□□□ -1.79
SIX1Q15475 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC3.88□□□□□ -1.79
SIX1Q15475 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC3.88□□□□□ -1.79
SIX1Q15475 AC015726.1-201ENST00000602353 681 ntBASIC3.88□□□□□ -1.79
SIX1Q15475 AC069431.2-201ENST00000604149 1099 ntBASIC3.88□□□□□ -1.79
SIX1Q15475 AL592436.1-201ENST00000605135 558 ntBASIC3.88□□□□□ -1.79
SIX1Q15475 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC3.88□□□□□ -1.79
SIX1Q15475 AC090525.3-201ENST00000605601 189 ntBASIC3.88□□□□□ -1.79
SIX1Q15475 AL121652.1-201ENST00000608851 448 ntBASIC3.88□□□□□ -1.79
SIX1Q15475 AC027449.1-201ENST00000608890 407 ntBASIC3.88□□□□□ -1.79
SIX1Q15475 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.88□□□□□ -1.79
SIX1Q15475 AC091046.2-201ENST00000620775 665 ntBASIC3.88□□□□□ -1.79
SIX1Q15475 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC3.88□□□□□ -1.79
SIX1Q15475 AF001550.2-201ENST00000636643 217 ntBASIC3.88□□□□□ -1.79
SIX1Q15475 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SIX1Q15475 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
SIX1Q15475 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms