Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC3.51□□□□□ -1.85
HMGCS1Q01581 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.51□□□□□ -1.85
HMGCS1Q01581 MIR124-3-201ENST00000384866 87 ntBASIC3.51□□□□□ -1.85
HMGCS1Q01581 AL356057.1-202ENST00000402263 756 ntBASIC3.51□□□□□ -1.85
HMGCS1Q01581 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
HMGCS1Q01581 AL445189.1-201ENST00000405722 338 ntBASIC3.51□□□□□ -1.85
HMGCS1Q01581 AL353692.2-201ENST00000407054 335 ntBASIC3.51□□□□□ -1.85
HMGCS1Q01581 AC010385.1-201ENST00000412374 256 ntBASIC3.51□□□□□ -1.85
HMGCS1Q01581 FAR1P1-201ENST00000427163 934 ntBASIC3.51□□□□□ -1.85
HMGCS1Q01581 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC3.51□□□□□ -1.85
HMGCS1Q01581 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC3.51□□□□□ -1.85
HMGCS1Q01581 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.51□□□□□ -1.85
HMGCS1Q01581 ZNF965P-201ENST00000432501 817 ntBASIC3.51□□□□□ -1.85
HMGCS1Q01581 USP9YP7-201ENST00000436723 430 ntBASIC3.51□□□□□ -1.85
HMGCS1Q01581 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC3.51□□□□□ -1.85
HMGCS1Q01581 AL031663.1-201ENST00000437445 219 ntBASIC3.51□□□□□ -1.85
HMGCS1Q01581 AC074367.1-201ENST00000438685 1125 ntBASIC3.51□□□□□ -1.85
HMGCS1Q01581 AL353093.1-201ENST00000441292 436 ntBASIC3.51□□□□□ -1.85
HMGCS1Q01581 RPS29P31-201ENST00000446147 164 ntBASIC3.51□□□□□ -1.85
HMGCS1Q01581 USP9YP32-201ENST00000452432 430 ntBASIC3.51□□□□□ -1.85
HMGCS1Q01581 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC3.51□□□□□ -1.85
HMGCS1Q01581 OR9N1P-202ENST00000494289 481 ntBASIC3.51□□□□□ -1.85
HMGCS1Q01581 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
HMGCS1Q01581 OR5H4P-201ENST00000510851 923 ntBASIC3.51□□□□□ -1.85
HMGCS1Q01581 RN7SKP141-201ENST00000516167 338 ntBASIC3.51□□□□□ -1.85
HMGCS1Q01581 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC3.51□□□□□ -1.85
HMGCS1Q01581 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.51□□□□□ -1.85
HMGCS1Q01581 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC3.51□□□□□ -1.85
HMGCS1Q01581 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC3.51□□□□□ -1.85
HMGCS1Q01581 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC3.51□□□□□ -1.85
HMGCS1Q01581 AC115621.1-201ENST00000604653 858 ntBASIC3.51□□□□□ -1.85
HMGCS1Q01581 AC110741.2-201ENST00000605278 268 ntBASIC3.51□□□□□ -1.85
HMGCS1Q01581 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC3.51□□□□□ -1.85
HMGCS1Q01581 AC011472.4-201ENST00000615848 491 ntBASIC3.51□□□□□ -1.85
HMGCS1Q01581 AK6-205ENST00000618980 483 ntTSL 2 BASIC3.51□□□□□ -1.85
HMGCS1Q01581 CR392039.4-201ENST00000624968 501 ntBASIC3.51□□□□□ -1.85
HMGCS1Q01581 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.51□□□□□ -1.85
HMGCS1Q01581 AP000553.6-201ENST00000641242 118 ntBASIC3.51□□□□□ -1.85
HMGCS1Q01581 AP004289.2-201ENST00000444413 1457 ntBASIC3.51□□□□□ -1.85
HMGCS1Q01581 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
HMGCS1Q01581 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.51□□□□□ -1.85
HMGCS1Q01581 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC3.51□□□□□ -1.85
HMGCS1Q01581 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
HMGCS1Q01581 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.51□□□□□ -1.85
HMGCS1Q01581 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.51□□□□□ -1.85
HMGCS1Q01581 EXOC5P1-201ENST00000510543 1969 ntBASIC3.51□□□□□ -1.85
HMGCS1Q01581 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
HMGCS1Q01581 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC3.5□□□□□ -1.85
HMGCS1Q01581 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
HMGCS1Q01581 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.5□□□□□ -1.85
HMGCS1Q01581 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
HMGCS1Q01581 AC006042.3-201ENST00000454684 1469 ntBASIC3.5□□□□□ -1.85
HMGCS1Q01581 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
HMGCS1Q01581 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
HMGCS1Q01581 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
HMGCS1Q01581 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC3.5□□□□□ -1.85
HMGCS1Q01581 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC3.5□□□□□ -1.85
HMGCS1Q01581 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC3.5□□□□□ -1.85
HMGCS1Q01581 RPL17P36-201ENST00000420302 549 ntBASIC3.5□□□□□ -1.85
HMGCS1Q01581 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
HMGCS1Q01581 HMGB3P5-201ENST00000428894 612 ntBASIC3.5□□□□□ -1.85
HMGCS1Q01581 AL365396.1-201ENST00000430854 671 ntBASIC3.5□□□□□ -1.85
HMGCS1Q01581 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC3.5□□□□□ -1.85
HMGCS1Q01581 AC009263.1-201ENST00000441193 1239 ntBASIC3.5□□□□□ -1.85
HMGCS1Q01581 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC3.5□□□□□ -1.85
HMGCS1Q01581 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC3.5□□□□□ -1.85
HMGCS1Q01581 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.5□□□□□ -1.85
HMGCS1Q01581 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC3.5□□□□□ -1.85
HMGCS1Q01581 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC3.5□□□□□ -1.85
HMGCS1Q01581 RPS20P21-201ENST00000466859 343 ntBASIC3.5□□□□□ -1.85
HMGCS1Q01581 AC091959.2-201ENST00000477363 321 ntBASIC3.5□□□□□ -1.85
HMGCS1Q01581 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC3.5□□□□□ -1.85
HMGCS1Q01581 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
HMGCS1Q01581 RNU6-1004P-201ENST00000516584 111 ntBASIC3.5□□□□□ -1.85
HMGCS1Q01581 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC3.5□□□□□ -1.85
HMGCS1Q01581 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC3.5□□□□□ -1.85
HMGCS1Q01581 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC3.5□□□□□ -1.85
HMGCS1Q01581 AC004923.2-201ENST00000529649 369 ntBASIC3.5□□□□□ -1.85
HMGCS1Q01581 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC3.5□□□□□ -1.85
HMGCS1Q01581 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC3.5□□□□□ -1.85
HMGCS1Q01581 AC107982.3-201ENST00000584957 985 ntBASIC3.5□□□□□ -1.85
HMGCS1Q01581 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
HMGCS1Q01581 OR4H6P-202ENST00000603819 340 ntBASIC3.5□□□□□ -1.85
HMGCS1Q01581 AC090525.3-201ENST00000605601 189 ntBASIC3.5□□□□□ -1.85
HMGCS1Q01581 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
HMGCS1Q01581 RNU1-30P-201ENST00000606575 163 ntBASIC3.5□□□□□ -1.85
HMGCS1Q01581 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
HMGCS1Q01581 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.5□□□□□ -1.85
HMGCS1Q01581 AP004607.9-201ENST00000618202 316 ntBASIC3.5□□□□□ -1.85
HMGCS1Q01581 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.5□□□□□ -1.85
HMGCS1Q01581 METTL8-218ENST00000638989 876 ntTSL 5 BASIC3.5□□□□□ -1.85
HMGCS1Q01581 METTL8-219ENST00000640734 726 ntTSL 2 BASIC3.5□□□□□ -1.85
HMGCS1Q01581 AL732372.2-225ENST00000642124 456 ntBASIC3.5□□□□□ -1.85
HMGCS1Q01581 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
HMGCS1Q01581 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
HMGCS1Q01581 AC025125.1-201ENST00000624743 1922 ntBASIC3.5□□□□□ -1.85
HMGCS1Q01581 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
HMGCS1Q01581 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
HMGCS1Q01581 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
HMGCS1Q01581 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms