Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC4.26□□□□□ -1.73
CCNA1P78396 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.26□□□□□ -1.73
CCNA1P78396 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC4.26□□□□□ -1.73
CCNA1P78396 RN7SL601P-201ENST00000471221 293 ntBASIC4.26□□□□□ -1.73
CCNA1P78396 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.26□□□□□ -1.73
CCNA1P78396 PDLIM1P4-201ENST00000504327 1006 ntBASIC4.26□□□□□ -1.73
CCNA1P78396 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC4.26□□□□□ -1.73
CCNA1P78396 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC4.26□□□□□ -1.73
CCNA1P78396 RNA5SP154-201ENST00000516193 111 ntBASIC4.26□□□□□ -1.73
CCNA1P78396 AC103843.2-201ENST00000530523 682 ntBASIC4.26□□□□□ -1.73
CCNA1P78396 AP000889.1-201ENST00000530968 660 ntBASIC4.26□□□□□ -1.73
CCNA1P78396 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.26□□□□□ -1.73
CCNA1P78396 ADAM3B-201ENST00000569937 840 ntBASIC4.26□□□□□ -1.73
CCNA1P78396 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC4.26□□□□□ -1.73
CCNA1P78396 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC4.26□□□□□ -1.73
CCNA1P78396 AC008638.3-201ENST00000603341 463 ntBASIC4.26□□□□□ -1.73
CCNA1P78396 RNA5SP108-201ENST00000605921 117 ntBASIC4.26□□□□□ -1.73
CCNA1P78396 ATE1-AS1-202ENST00000636460 506 ntBASIC4.26□□□□□ -1.73
CCNA1P78396 AC119674.1-220ENST00000641502 1048 ntBASIC4.26□□□□□ -1.73
CCNA1P78396 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
CCNA1P78396 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC4.26□□□□□ -1.73
CCNA1P78396 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CCNA1P78396 AL365440.1-201ENST00000436135 2167 ntBASIC4.26□□□□□ -1.73
CCNA1P78396 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CCNA1P78396 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC4.25□□□□□ -1.73
CCNA1P78396 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC4.25□□□□□ -1.73
CCNA1P78396 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CCNA1P78396 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.25□□□□□ -1.73
CCNA1P78396 RNA5SP167-201ENST00000365461 116 ntBASIC4.25□□□□□ -1.73
CCNA1P78396 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CCNA1P78396 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC4.25□□□□□ -1.73
CCNA1P78396 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CCNA1P78396 AL356806.1-201ENST00000422524 916 ntBASIC4.25□□□□□ -1.73
CCNA1P78396 SNORA71B-202ENST00000439232 272 ntBASIC4.25□□□□□ -1.73
CCNA1P78396 HMGB3P30-201ENST00000457863 606 ntBASIC4.25□□□□□ -1.73
CCNA1P78396 AC111193.1-201ENST00000504097 155 ntBASIC4.25□□□□□ -1.73
CCNA1P78396 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.25□□□□□ -1.73
CCNA1P78396 RAC1P2-201ENST00000511164 579 ntBASIC4.25□□□□□ -1.73
CCNA1P78396 MYL12AP1-201ENST00000518490 515 ntBASIC4.25□□□□□ -1.73
CCNA1P78396 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.25□□□□□ -1.73
CCNA1P78396 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC4.25□□□□□ -1.73
CCNA1P78396 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.25□□□□□ -1.73
CCNA1P78396 AP002812.4-201ENST00000532139 286 ntBASIC4.25□□□□□ -1.73
CCNA1P78396 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC4.25□□□□□ -1.73
CCNA1P78396 RPL21P12-201ENST00000559810 515 ntBASIC4.25□□□□□ -1.73
CCNA1P78396 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC4.25□□□□□ -1.73
CCNA1P78396 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC4.25□□□□□ -1.73
CCNA1P78396 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC4.25□□□□□ -1.73
CCNA1P78396 AL139395.1-201ENST00000603662 160 ntBASIC4.25□□□□□ -1.73
CCNA1P78396 AC128687.2-201ENST00000609657 566 ntBASIC4.25□□□□□ -1.73
CCNA1P78396 AC243756.2-201ENST00000618406 463 ntBASIC4.25□□□□□ -1.73
CCNA1P78396 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC4.25□□□□□ -1.73
CCNA1P78396 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CCNA1P78396 AC017007.4-201ENST00000503353 1352 ntBASIC4.25□□□□□ -1.73
CCNA1P78396 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.25□□□□□ -1.73
CCNA1P78396 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC4.25□□□□□ -1.73
CCNA1P78396 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.25□□□□□ -1.73
CCNA1P78396 AC090337.1-201ENST00000579651 2074 ntBASIC4.25□□□□□ -1.73
CCNA1P78396 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.25□□□□□ -1.73
CCNA1P78396 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CCNA1P78396 AC022031.1-201ENST00000585985 2593 ntBASIC4.24□□□□□ -1.73
CCNA1P78396 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
CCNA1P78396 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CCNA1P78396 SNORD9-201ENST00000362566 104 ntBASIC4.24□□□□□ -1.73
CCNA1P78396 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CCNA1P78396 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC4.24□□□□□ -1.73
CCNA1P78396 LAP3P1-201ENST00000403648 294 ntBASIC4.24□□□□□ -1.73
CCNA1P78396 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC4.24□□□□□ -1.73
CCNA1P78396 BX842559.1-201ENST00000419615 532 ntBASIC4.24□□□□□ -1.73
CCNA1P78396 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC4.24□□□□□ -1.73
CCNA1P78396 USP9YP7-201ENST00000436723 430 ntBASIC4.24□□□□□ -1.73
CCNA1P78396 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC4.24□□□□□ -1.73
CCNA1P78396 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC4.24□□□□□ -1.73
CCNA1P78396 USP9YP32-201ENST00000452432 430 ntBASIC4.24□□□□□ -1.73
CCNA1P78396 AC026784.1-201ENST00000507986 352 ntBASIC4.24□□□□□ -1.73
CCNA1P78396 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC4.24□□□□□ -1.73
CCNA1P78396 RNA5SP309-201ENST00000516670 106 ntBASIC4.24□□□□□ -1.73
CCNA1P78396 SCARNA13-201ENST00000516672 275 ntBASIC4.24□□□□□ -1.73
CCNA1P78396 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC4.24□□□□□ -1.73
CCNA1P78396 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC4.24□□□□□ -1.73
CCNA1P78396 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC4.24□□□□□ -1.73
CCNA1P78396 UBTFL9-201ENST00000534504 1148 ntBASIC4.24□□□□□ -1.73
CCNA1P78396 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC4.24□□□□□ -1.73
CCNA1P78396 AC006116.10-201ENST00000591836 581 ntBASIC4.24□□□□□ -1.73
CCNA1P78396 ZNF92P3-201ENST00000596594 954 ntBASIC4.24□□□□□ -1.73
CCNA1P78396 MIMT1-201ENST00000597105 1050 ntBASIC4.24□□□□□ -1.73
CCNA1P78396 AL137849.1-201ENST00000604767 169 ntBASIC4.24□□□□□ -1.73
CCNA1P78396 AL355365.1-201ENST00000616480 294 ntBASIC4.24□□□□□ -1.73
CCNA1P78396 AP001002.2-201ENST00000625137 386 ntBASIC4.24□□□□□ -1.73
CCNA1P78396 AP000553.6-201ENST00000641242 118 ntBASIC4.24□□□□□ -1.73
CCNA1P78396 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CCNA1P78396 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.24□□□□□ -1.73
CCNA1P78396 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CCNA1P78396 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CCNA1P78396 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
CCNA1P78396 DCAF13P1-201ENST00000495256 1330 ntBASIC4.23□□□□□ -1.73
CCNA1P78396 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
CCNA1P78396 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CCNA1P78396 MIR421-201ENST00000365696 85 ntBASIC4.23□□□□□ -1.73
CCNA1P78396 SOD2P1-201ENST00000396543 562 ntBASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms