Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CDH6P55285 CEP170P1-201ENST00000502249 4587 ntBASIC3.81□□□□□ -1.8
CDH6P55285 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CDH6P55285 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CDH6P55285 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.81□□□□□ -1.8
CDH6P55285 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CDH6P55285 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CDH6P55285 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
CDH6P55285 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
CDH6P55285 RPL7P60-201ENST00000397636 735 ntBASIC3.81□□□□□ -1.8
CDH6P55285 AL391417.1-201ENST00000404100 426 ntBASIC3.81□□□□□ -1.8
CDH6P55285 HNRNPDP2-201ENST00000406475 478 ntBASIC3.81□□□□□ -1.8
CDH6P55285 HMGB3P5-201ENST00000428894 612 ntBASIC3.81□□□□□ -1.8
CDH6P55285 BMS1P19-201ENST00000433925 393 ntBASIC3.81□□□□□ -1.8
CDH6P55285 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC3.81□□□□□ -1.8
CDH6P55285 ELOCP3-201ENST00000439303 348 ntBASIC3.81□□□□□ -1.8
CDH6P55285 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CDH6P55285 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC3.81□□□□□ -1.8
CDH6P55285 AC110792.2-201ENST00000510278 224 ntBASIC3.81□□□□□ -1.8
CDH6P55285 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC3.81□□□□□ -1.8
CDH6P55285 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.81□□□□□ -1.8
CDH6P55285 AL121576.1-201ENST00000556055 276 ntBASIC3.81□□□□□ -1.8
CDH6P55285 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.81□□□□□ -1.8
CDH6P55285 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.81□□□□□ -1.8
CDH6P55285 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.81□□□□□ -1.8
CDH6P55285 RNU1-30P-201ENST00000606575 163 ntBASIC3.81□□□□□ -1.8
CDH6P55285 CR589904.2-201ENST00000612533 440 ntBASIC3.81□□□□□ -1.8
CDH6P55285 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CDH6P55285 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CDH6P55285 AC073073.2-201ENST00000609827 2578 ntBASIC3.81□□□□□ -1.8
CDH6P55285 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
CDH6P55285 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
CDH6P55285 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.81□□□□□ -1.8
CDH6P55285 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.81□□□□□ -1.8
CDH6P55285 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.8□□□□□ -1.8
CDH6P55285 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CDH6P55285 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.8□□□□□ -1.8
CDH6P55285 DDX6P1-205ENST00000441966 1436 ntBASIC3.8□□□□□ -1.8
CDH6P55285 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CDH6P55285 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.8□□□□□ -1.8
CDH6P55285 RNA5SP167-201ENST00000365461 116 ntBASIC3.8□□□□□ -1.8
CDH6P55285 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CDH6P55285 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC3.8□□□□□ -1.8
CDH6P55285 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CDH6P55285 MTCO3P4-201ENST00000419236 787 ntBASIC3.8□□□□□ -1.8
CDH6P55285 RPL31P45-201ENST00000419532 356 ntBASIC3.8□□□□□ -1.8
CDH6P55285 FO393419.3-201ENST00000428741 282 ntBASIC3.8□□□□□ -1.8
CDH6P55285 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.8□□□□□ -1.8
CDH6P55285 MTCYBP21-201ENST00000443300 1113 ntBASIC3.8□□□□□ -1.8
CDH6P55285 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.8□□□□□ -1.8
CDH6P55285 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.8□□□□□ -1.8
CDH6P55285 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC3.8□□□□□ -1.8
CDH6P55285 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC3.8□□□□□ -1.8
CDH6P55285 CEACAMP4-201ENST00000457676 421 ntBASIC3.8□□□□□ -1.8
CDH6P55285 SNORD108-201ENST00000459332 71 ntBASIC3.8□□□□□ -1.8
CDH6P55285 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
CDH6P55285 AC091959.2-201ENST00000477363 321 ntBASIC3.8□□□□□ -1.8
CDH6P55285 NPM1P17-201ENST00000479221 602 ntBASIC3.8□□□□□ -1.8
CDH6P55285 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC3.8□□□□□ -1.8
CDH6P55285 TRAV31-201ENST00000502780 342 ntBASIC3.8□□□□□ -1.8
CDH6P55285 PDLIM1P4-201ENST00000504327 1006 ntBASIC3.8□□□□□ -1.8
CDH6P55285 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.8□□□□□ -1.8
CDH6P55285 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CDH6P55285 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC3.8□□□□□ -1.8
CDH6P55285 PTP4A1P6-201ENST00000531034 478 ntBASIC3.8□□□□□ -1.8
CDH6P55285 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CDH6P55285 NOP56P3-201ENST00000549457 385 ntBASIC3.8□□□□□ -1.8
CDH6P55285 AC023161.2-201ENST00000551218 780 ntBASIC3.8□□□□□ -1.8
CDH6P55285 BNIP3P5-201ENST00000562290 498 ntBASIC3.8□□□□□ -1.8
CDH6P55285 CBX3P2-202ENST00000583365 535 ntBASIC3.8□□□□□ -1.8
CDH6P55285 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.8□□□□□ -1.8
CDH6P55285 AL392112.1-201ENST00000605115 829 ntBASIC3.8□□□□□ -1.8
CDH6P55285 AC006946.3-201ENST00000609791 756 ntBASIC3.8□□□□□ -1.8
CDH6P55285 AC105429.2-201ENST00000610567 517 ntBASIC3.8□□□□□ -1.8
CDH6P55285 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.8□□□□□ -1.8
CDH6P55285 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
CDH6P55285 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.8□□□□□ -1.8
CDH6P55285 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CDH6P55285 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
CDH6P55285 RNU6-283P-201ENST00000364788 107 ntBASIC3.79□□□□□ -1.8
CDH6P55285 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.79□□□□□ -1.8
CDH6P55285 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.79□□□□□ -1.8
CDH6P55285 PRELID3BP11-201ENST00000414230 479 ntBASIC3.79□□□□□ -1.8
CDH6P55285 TEX41-203ENST00000420472 765 ntTSL 3 BASIC3.79□□□□□ -1.8
CDH6P55285 RPL7P4-203ENST00000430239 730 ntBASIC3.79□□□□□ -1.8
CDH6P55285 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC3.79□□□□□ -1.8
CDH6P55285 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC3.79□□□□□ -1.8
CDH6P55285 AC010655.1-201ENST00000449336 292 ntBASIC3.79□□□□□ -1.8
CDH6P55285 AC096992.1-201ENST00000459808 709 ntBASIC3.79□□□□□ -1.8
CDH6P55285 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC3.79□□□□□ -1.8
CDH6P55285 AC002456.2-201ENST00000509356 380 ntBASIC3.79□□□□□ -1.8
CDH6P55285 AC026402.1-201ENST00000513642 170 ntBASIC3.79□□□□□ -1.8
CDH6P55285 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3.79□□□□□ -1.8
CDH6P55285 OR5AP1P-201ENST00000529730 940 ntBASIC3.79□□□□□ -1.8
CDH6P55285 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.79□□□□□ -1.8
CDH6P55285 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.79□□□□□ -1.8
CDH6P55285 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC3.79□□□□□ -1.8
CDH6P55285 AC067805.1-201ENST00000559344 470 ntBASIC3.79□□□□□ -1.8
CDH6P55285 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC3.79□□□□□ -1.8
CDH6P55285 AC015911.5-201ENST00000587076 451 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms