Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC5.65□□□□□ -1.5
MRE11P49959 AL592221.1-201ENST00000605266 382 ntBASIC5.65□□□□□ -1.5
MRE11P49959 AC128687.1-201ENST00000605304 619 ntBASIC5.65□□□□□ -1.5
MRE11P49959 AC108747.1-201ENST00000609508 535 ntBASIC5.65□□□□□ -1.5
MRE11P49959 DLEU2_1.1-201ENST00000612089 120 ntBASIC5.65□□□□□ -1.5
MRE11P49959 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
MRE11P49959 DLEU2_1.2-201ENST00000614667 120 ntBASIC5.65□□□□□ -1.5
MRE11P49959 MIR7154-201ENST00000620673 73 ntBASIC5.65□□□□□ -1.5
MRE11P49959 AC091905.4-201ENST00000623432 202 ntBASIC5.65□□□□□ -1.5
MRE11P49959 AC135068.12-201ENST00000637370 931 ntBASIC5.65□□□□□ -1.5
MRE11P49959 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
MRE11P49959 OR14L1P-202ENST00000641545 3009 ntBASIC5.65□□□□□ -1.51
MRE11P49959 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.51
MRE11P49959 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
MRE11P49959 KPNA2P2-201ENST00000419546 1489 ntBASIC5.64□□□□□ -1.51
MRE11P49959 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
MRE11P49959 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
MRE11P49959 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
MRE11P49959 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
MRE11P49959 RNU4-21P-201ENST00000362802 126 ntBASIC5.64□□□□□ -1.51
MRE11P49959 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC5.64□□□□□ -1.51
MRE11P49959 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC5.64□□□□□ -1.51
MRE11P49959 RNU6-1119P-201ENST00000384349 108 ntBASIC5.64□□□□□ -1.51
MRE11P49959 SNORA11.1-201ENST00000408133 129 ntBASIC5.64□□□□□ -1.51
MRE11P49959 RNA5SP80-201ENST00000410475 111 ntBASIC5.64□□□□□ -1.51
MRE11P49959 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC5.64□□□□□ -1.51
MRE11P49959 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC5.64□□□□□ -1.51
MRE11P49959 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
MRE11P49959 COX6B1P1-201ENST00000415962 213 ntBASIC5.64□□□□□ -1.51
MRE11P49959 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC5.64□□□□□ -1.51
MRE11P49959 AC004938.1-201ENST00000438468 308 ntBASIC5.64□□□□□ -1.51
MRE11P49959 RPS29P10-201ENST00000439197 166 ntBASIC5.64□□□□□ -1.51
MRE11P49959 AL353572.1-201ENST00000442490 417 ntBASIC5.64□□□□□ -1.51
MRE11P49959 COX6CP2-201ENST00000444980 225 ntBASIC5.64□□□□□ -1.51
MRE11P49959 AL589765.3-201ENST00000446084 462 ntBASIC5.64□□□□□ -1.51
MRE11P49959 AC105399.1-202ENST00000447303 205 ntBASIC5.64□□□□□ -1.51
MRE11P49959 AC073264.2-201ENST00000448886 166 ntBASIC5.64□□□□□ -1.51
MRE11P49959 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC5.64□□□□□ -1.51
MRE11P49959 SUMO2P2-201ENST00000456482 255 ntBASIC5.64□□□□□ -1.51
MRE11P49959 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC5.64□□□□□ -1.51
MRE11P49959 AC113430.1-201ENST00000506872 718 ntBASIC5.64□□□□□ -1.51
MRE11P49959 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC5.64□□□□□ -1.51
MRE11P49959 CDC42P4-201ENST00000510507 563 ntBASIC5.64□□□□□ -1.51
MRE11P49959 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC5.64□□□□□ -1.51
MRE11P49959 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC5.64□□□□□ -1.51
MRE11P49959 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC5.64□□□□□ -1.51
MRE11P49959 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC5.64□□□□□ -1.51
MRE11P49959 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC5.64□□□□□ -1.51
MRE11P49959 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC5.64□□□□□ -1.51
MRE11P49959 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC5.64□□□□□ -1.51
MRE11P49959 MTND6P33-201ENST00000571794 183 ntBASIC5.64□□□□□ -1.51
MRE11P49959 MIR3160-1-201ENST00000577972 85 ntBASIC5.64□□□□□ -1.51
MRE11P49959 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
MRE11P49959 AC011487.3-201ENST00000593607 453 ntBASIC5.64□□□□□ -1.51
MRE11P49959 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC5.64□□□□□ -1.51
MRE11P49959 AC069545.1-201ENST00000605671 358 ntBASIC5.64□□□□□ -1.51
MRE11P49959 AC010857.1-201ENST00000606398 594 ntBASIC5.64□□□□□ -1.51
MRE11P49959 AP005137.2-201ENST00000609238 400 ntBASIC5.64□□□□□ -1.51
MRE11P49959 AL158196.1-201ENST00000616786 434 ntBASIC5.64□□□□□ -1.51
MRE11P49959 STMN1P1-201ENST00000617809 440 ntBASIC5.64□□□□□ -1.51
MRE11P49959 AC087385.3-201ENST00000620477 187 ntBASIC5.64□□□□□ -1.51
MRE11P49959 AC024595.1-201ENST00000623088 387 ntBASIC5.64□□□□□ -1.51
MRE11P49959 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.64□□□□□ -1.51
MRE11P49959 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
MRE11P49959 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
MRE11P49959 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC5.64□□□□□ -1.51
MRE11P49959 AC011477.1-204ENST00000623416 1325 ntBASIC5.64□□□□□ -1.51
MRE11P49959 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.64□□□□□ -1.51
MRE11P49959 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC5.64□□□□□ -1.51
MRE11P49959 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
MRE11P49959 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.63□□□□□ -1.51
MRE11P49959 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
MRE11P49959 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
MRE11P49959 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
MRE11P49959 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
MRE11P49959 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
MRE11P49959 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC5.63□□□□□ -1.51
MRE11P49959 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
MRE11P49959 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC5.63□□□□□ -1.51
MRE11P49959 AC092747.4-201ENST00000620519 1861 ntBASIC5.63□□□□□ -1.51
MRE11P49959 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
MRE11P49959 ARHGAP42P3-201ENST00000443989 2508 ntBASIC5.63□□□□□ -1.51
MRE11P49959 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
MRE11P49959 RNU6-525P-201ENST00000363685 104 ntBASIC5.63□□□□□ -1.51
MRE11P49959 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC5.63□□□□□ -1.51
MRE11P49959 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
MRE11P49959 AL133388.1-201ENST00000404509 287 ntBASIC5.63□□□□□ -1.51
MRE11P49959 RNU6-575P-201ENST00000411326 105 ntBASIC5.63□□□□□ -1.51
MRE11P49959 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC5.63□□□□□ -1.51
MRE11P49959 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC5.63□□□□□ -1.51
MRE11P49959 RPL7P8-201ENST00000411964 730 ntBASIC5.63□□□□□ -1.51
MRE11P49959 CDK8P2-201ENST00000415020 547 ntBASIC5.63□□□□□ -1.51
MRE11P49959 RPL30P16-201ENST00000419341 429 ntBASIC5.63□□□□□ -1.51
MRE11P49959 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC5.63□□□□□ -1.51
MRE11P49959 GCA-203ENST00000429691 824 ntTSL 3 BASIC5.63□□□□□ -1.51
MRE11P49959 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC5.63□□□□□ -1.51
MRE11P49959 AL353093.1-201ENST00000441292 436 ntBASIC5.63□□□□□ -1.51
MRE11P49959 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC5.63□□□□□ -1.51
MRE11P49959 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
MRE11P49959 RPL5P32-201ENST00000454085 879 ntBASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms