Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.81□□□□□ -1.8
TNFSF9P41273 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.81□□□□□ -1.8
TNFSF9P41273 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.81□□□□□ -1.8
TNFSF9P41273 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC3.81□□□□□ -1.8
TNFSF9P41273 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC3.81□□□□□ -1.8
TNFSF9P41273 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.81□□□□□ -1.8
TNFSF9P41273 AL355816.1-201ENST00000607951 118 ntBASIC3.81□□□□□ -1.8
TNFSF9P41273 AP003355.3-201ENST00000623465 114 ntBASIC3.81□□□□□ -1.8
TNFSF9P41273 U6.105-201ENST00000637379 88 ntBASIC3.81□□□□□ -1.8
TNFSF9P41273 AC119674.1-220ENST00000641502 1048 ntBASIC3.81□□□□□ -1.8
TNFSF9P41273 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
TNFSF9P41273 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
TNFSF9P41273 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.81□□□□□ -1.8
TNFSF9P41273 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
TNFSF9P41273 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
TNFSF9P41273 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
TNFSF9P41273 AC093311.1-201ENST00000506586 2021 ntBASIC3.8□□□□□ -1.8
TNFSF9P41273 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.8□□□□□ -1.8
TNFSF9P41273 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
TNFSF9P41273 OR6K3-202ENST00000368146 996 ntBASIC3.8□□□□□ -1.8
TNFSF9P41273 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
TNFSF9P41273 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
TNFSF9P41273 RPL7P4-203ENST00000430239 730 ntBASIC3.8□□□□□ -1.8
TNFSF9P41273 AL159987.2-201ENST00000432754 307 ntBASIC3.8□□□□□ -1.8
TNFSF9P41273 CBX1P4-201ENST00000439415 457 ntBASIC3.8□□□□□ -1.8
TNFSF9P41273 AC104978.1-201ENST00000449387 391 ntBASIC3.8□□□□□ -1.8
TNFSF9P41273 NDUFS5P3-201ENST00000450668 321 ntBASIC3.8□□□□□ -1.8
TNFSF9P41273 AC008155.2-201ENST00000464337 397 ntBASIC3.8□□□□□ -1.8
TNFSF9P41273 HMGB3P14-201ENST00000494195 599 ntBASIC3.8□□□□□ -1.8
TNFSF9P41273 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC3.8□□□□□ -1.8
TNFSF9P41273 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
TNFSF9P41273 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC3.8□□□□□ -1.8
TNFSF9P41273 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC3.8□□□□□ -1.8
TNFSF9P41273 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
TNFSF9P41273 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC3.8□□□□□ -1.8
TNFSF9P41273 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC3.8□□□□□ -1.8
TNFSF9P41273 AC023158.1-201ENST00000561632 1025 ntBASIC3.8□□□□□ -1.8
TNFSF9P41273 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.8□□□□□ -1.8
TNFSF9P41273 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC3.8□□□□□ -1.8
TNFSF9P41273 AC067852.3-201ENST00000589177 561 ntBASIC3.8□□□□□ -1.8
TNFSF9P41273 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.8□□□□□ -1.8
TNFSF9P41273 AC010680.3-201ENST00000604215 520 ntBASIC3.8□□□□□ -1.8
TNFSF9P41273 BNIP3P7-201ENST00000605641 516 ntBASIC3.8□□□□□ -1.8
TNFSF9P41273 AC092354.2-201ENST00000607786 514 ntBASIC3.8□□□□□ -1.8
TNFSF9P41273 AC135803.1-201ENST00000608748 565 ntBASIC3.8□□□□□ -1.8
TNFSF9P41273 AC096577.2-201ENST00000611455 153 ntBASIC3.8□□□□□ -1.8
TNFSF9P41273 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.8□□□□□ -1.8
TNFSF9P41273 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
TNFSF9P41273 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.8□□□□□ -1.8
TNFSF9P41273 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
TNFSF9P41273 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.8□□□□□ -1.8
TNFSF9P41273 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
TNFSF9P41273 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
TNFSF9P41273 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC3.8□□□□□ -1.8
TNFSF9P41273 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
TNFSF9P41273 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC3.8□□□□□ -1.8
TNFSF9P41273 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC3.8□□□□□ -1.8
TNFSF9P41273 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC3.8□□□□□ -1.8
TNFSF9P41273 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
TNFSF9P41273 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC3.79□□□□□ -1.8
TNFSF9P41273 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.79□□□□□ -1.8
TNFSF9P41273 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.79□□□□□ -1.8
TNFSF9P41273 AL645937.1-201ENST00000641739 1652 ntBASIC3.79□□□□□ -1.8
TNFSF9P41273 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
TNFSF9P41273 AC105402.1-201ENST00000413336 545 ntBASIC3.79□□□□□ -1.8
TNFSF9P41273 OSTCP5-201ENST00000425293 453 ntBASIC3.79□□□□□ -1.8
TNFSF9P41273 AC006989.1-201ENST00000427212 131 ntBASIC3.79□□□□□ -1.8
TNFSF9P41273 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC3.79□□□□□ -1.8
TNFSF9P41273 UBE2V2P3-201ENST00000433562 437 ntBASIC3.79□□□□□ -1.8
TNFSF9P41273 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.79□□□□□ -1.8
TNFSF9P41273 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.79□□□□□ -1.8
TNFSF9P41273 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.79□□□□□ -1.8
TNFSF9P41273 RN7SL594P-201ENST00000470590 287 ntBASIC3.79□□□□□ -1.8
TNFSF9P41273 RPS6P4-201ENST00000494693 758 ntBASIC3.79□□□□□ -1.8
TNFSF9P41273 AC074250.1-201ENST00000511117 192 ntBASIC3.79□□□□□ -1.8
TNFSF9P41273 RNU6-1004P-201ENST00000516584 111 ntBASIC3.79□□□□□ -1.8
TNFSF9P41273 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.79□□□□□ -1.8
TNFSF9P41273 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC3.79□□□□□ -1.8
TNFSF9P41273 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC3.79□□□□□ -1.8
TNFSF9P41273 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC3.79□□□□□ -1.8
TNFSF9P41273 MIR548Y-201ENST00000582739 110 ntBASIC3.79□□□□□ -1.8
TNFSF9P41273 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.79□□□□□ -1.8
TNFSF9P41273 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.79□□□□□ -1.8
TNFSF9P41273 VN1R84P-201ENST00000593697 235 ntBASIC3.79□□□□□ -1.8
TNFSF9P41273 AP003117.1-201ENST00000602771 554 ntBASIC3.79□□□□□ -1.8
TNFSF9P41273 AC084036.1-201ENST00000609190 508 ntBASIC3.79□□□□□ -1.8
TNFSF9P41273 AC091953.5-201ENST00000622919 233 ntBASIC3.79□□□□□ -1.8
TNFSF9P41273 AP003072.4-201ENST00000624580 310 ntBASIC3.79□□□□□ -1.8
TNFSF9P41273 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.79□□□□□ -1.8
TNFSF9P41273 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
TNFSF9P41273 AC083899.2-201ENST00000423285 1376 ntBASIC3.78□□□□□ -1.8
TNFSF9P41273 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.78□□□□□ -1.8
TNFSF9P41273 FAM35DP-201ENST00000323387 2712 ntBASIC3.78□□□□□ -1.8
TNFSF9P41273 RNA5SP235-201ENST00000365411 114 ntBASIC3.78□□□□□ -1.8
TNFSF9P41273 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC3.78□□□□□ -1.8
TNFSF9P41273 RNU6-317P-201ENST00000384031 107 ntBASIC3.78□□□□□ -1.8
TNFSF9P41273 RPL17P50-201ENST00000396131 546 ntBASIC3.78□□□□□ -1.8
TNFSF9P41273 BX842559.1-201ENST00000419615 532 ntBASIC3.78□□□□□ -1.8
TNFSF9P41273 RWDD4P2-201ENST00000426392 563 ntBASIC3.78□□□□□ -1.8
TNFSF9P41273 MRPS18BP2-201ENST00000434310 759 ntBASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 123.1 ms