Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 AP003072.5-201ENST00000623872 773 ntBASIC4.05□□□□□ -1.76
SCN4AP35499 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SCN4AP35499 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SCN4AP35499 CEP170P1-201ENST00000502249 4587 ntBASIC4.05□□□□□ -1.76
SCN4AP35499 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SCN4AP35499 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC4.05□□□□□ -1.76
SCN4AP35499 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SCN4AP35499 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SCN4AP35499 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC4.05□□□□□ -1.76
SCN4AP35499 AC239809.1-201ENST00000450470 217 ntBASIC4.05□□□□□ -1.76
SCN4AP35499 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.05□□□□□ -1.76
SCN4AP35499 AC023598.1-201ENST00000472521 361 ntBASIC4.05□□□□□ -1.76
SCN4AP35499 TRBV12-2-201ENST00000489763 344 ntBASIC4.05□□□□□ -1.76
SCN4AP35499 AC091826.1-201ENST00000514065 313 ntBASIC4.05□□□□□ -1.76
SCN4AP35499 AC105036.1-201ENST00000566222 271 ntBASIC4.05□□□□□ -1.76
SCN4AP35499 ZNF826P-207ENST00000622273 1910 ntBASIC4.04□□□□□ -1.76
SCN4AP35499 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SCN4AP35499 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC4.04□□□□□ -1.76
SCN4AP35499 SNORA68.2-201ENST00000391263 128 ntBASIC4.04□□□□□ -1.76
SCN4AP35499 AL138878.1-201ENST00000405131 347 ntBASIC4.04□□□□□ -1.76
SCN4AP35499 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.04□□□□□ -1.76
SCN4AP35499 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC4.04□□□□□ -1.76
SCN4AP35499 AL353705.1-201ENST00000433468 480 ntBASIC4.04□□□□□ -1.76
SCN4AP35499 RPL32P28-201ENST00000443577 397 ntBASIC4.04□□□□□ -1.76
SCN4AP35499 BTF3L4P4-201ENST00000506381 449 ntBASIC4.04□□□□□ -1.76
SCN4AP35499 AC008885.1-201ENST00000514930 301 ntBASIC4.04□□□□□ -1.76
SCN4AP35499 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.04□□□□□ -1.76
SCN4AP35499 AC022080.3-201ENST00000544433 482 ntBASIC4.04□□□□□ -1.76
SCN4AP35499 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC4.04□□□□□ -1.76
SCN4AP35499 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC4.04□□□□□ -1.76
SCN4AP35499 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SCN4AP35499 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.04□□□□□ -1.76
SCN4AP35499 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.03□□□□□ -1.76
SCN4AP35499 NMD3P1-201ENST00000439704 1488 ntBASIC4.03□□□□□ -1.76
SCN4AP35499 OR5H2-201ENST00000355273 945 ntBASIC4.03□□□□□ -1.76
SCN4AP35499 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
SCN4AP35499 RNU1-89P-201ENST00000384592 164 ntBASIC4.03□□□□□ -1.76
SCN4AP35499 AC002075.2-201ENST00000425207 252 ntBASIC4.03□□□□□ -1.76
SCN4AP35499 MTND2P25-201ENST00000449028 610 ntBASIC4.03□□□□□ -1.76
SCN4AP35499 AC099560.2-201ENST00000457554 255 ntBASIC4.03□□□□□ -1.76
SCN4AP35499 VN1R104P-201ENST00000505115 1009 ntBASIC4.03□□□□□ -1.76
SCN4AP35499 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC4.03□□□□□ -1.76
SCN4AP35499 MRPS35P3-201ENST00000603189 709 ntBASIC4.03□□□□□ -1.76
SCN4AP35499 AC110741.2-201ENST00000605278 268 ntBASIC4.03□□□□□ -1.76
SCN4AP35499 AL137246.1-201ENST00000607072 977 ntBASIC4.03□□□□□ -1.76
SCN4AP35499 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC4.03□□□□□ -1.76
SCN4AP35499 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SCN4AP35499 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.03□□□□□ -1.76
SCN4AP35499 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
SCN4AP35499 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.02□□□□□ -1.77
SCN4AP35499 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
SCN4AP35499 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SCN4AP35499 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC4.02□□□□□ -1.77
SCN4AP35499 NAP1L1P2-201ENST00000414182 1089 ntBASIC4.02□□□□□ -1.77
SCN4AP35499 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC4.02□□□□□ -1.77
SCN4AP35499 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC4.02□□□□□ -1.77
SCN4AP35499 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC4.02□□□□□ -1.77
SCN4AP35499 AC140076.1-201ENST00000449897 361 ntBASIC4.02□□□□□ -1.77
SCN4AP35499 AC004924.1-201ENST00000480160 781 ntBASIC4.02□□□□□ -1.77
SCN4AP35499 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC4.02□□□□□ -1.77
SCN4AP35499 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC4.02□□□□□ -1.77
SCN4AP35499 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC4.02□□□□□ -1.77
SCN4AP35499 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC4.02□□□□□ -1.77
SCN4AP35499 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC4.02□□□□□ -1.77
SCN4AP35499 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC4.02□□□□□ -1.77
SCN4AP35499 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC4.02□□□□□ -1.77
SCN4AP35499 SNORD39.4-201ENST00000620099 78 ntBASIC4.02□□□□□ -1.77
SCN4AP35499 AC018692.3-201ENST00000623929 123 ntBASIC4.02□□□□□ -1.77
SCN4AP35499 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.02□□□□□ -1.77
SCN4AP35499 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SCN4AP35499 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SCN4AP35499 RNA5SP42-201ENST00000364278 115 ntBASIC4.02□□□□□ -1.77
SCN4AP35499 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
SCN4AP35499 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC4.02□□□□□ -1.77
SCN4AP35499 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC4.02□□□□□ -1.77
SCN4AP35499 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC4.02□□□□□ -1.77
SCN4AP35499 AL139132.1-201ENST00000431587 344 ntBASIC4.02□□□□□ -1.77
SCN4AP35499 NDUFB1P1-201ENST00000435191 180 ntBASIC4.02□□□□□ -1.77
SCN4AP35499 AC021678.1-201ENST00000505195 936 ntBASIC4.02□□□□□ -1.77
SCN4AP35499 RNA5SP356-201ENST00000515972 94 ntBASIC4.02□□□□□ -1.77
SCN4AP35499 KCTD9P6-201ENST00000522306 950 ntBASIC4.02□□□□□ -1.77
SCN4AP35499 AP000926.4-201ENST00000527351 454 ntBASIC4.02□□□□□ -1.77
SCN4AP35499 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC4.02□□□□□ -1.77
SCN4AP35499 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC4.02□□□□□ -1.77
SCN4AP35499 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC4.02□□□□□ -1.77
SCN4AP35499 AL049844.2-201ENST00000604280 628 ntBASIC4.02□□□□□ -1.77
SCN4AP35499 AL034351.1-201ENST00000605288 668 ntBASIC4.02□□□□□ -1.77
SCN4AP35499 AC132825.8-201ENST00000640783 297 ntBASIC4.02□□□□□ -1.77
SCN4AP35499 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SCN4AP35499 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC4.02□□□□□ -1.77
SCN4AP35499 AC007656.2-201ENST00000624902 4547 ntBASIC4.02□□□□□ -1.77
SCN4AP35499 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.02□□□□□ -1.77
SCN4AP35499 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC4.01□□□□□ -1.77
SCN4AP35499 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
SCN4AP35499 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
SCN4AP35499 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
SCN4AP35499 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
SCN4AP35499 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.01□□□□□ -1.77
SCN4AP35499 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC4.01□□□□□ -1.77
SCN4AP35499 AL121890.1-201ENST00000435457 205 ntBASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 94.8 ms