Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.71□□□□□ -1.82
RORAP35398 OR4A15-201ENST00000314706 1035 ntBASIC3.71□□□□□ -1.82
RORAP35398 RNA5SP97-201ENST00000365006 84 ntBASIC3.71□□□□□ -1.82
RORAP35398 AL590704.1-201ENST00000402856 794 ntBASIC3.71□□□□□ -1.82
RORAP35398 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC3.71□□□□□ -1.82
RORAP35398 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
RORAP35398 MTND4LP14-201ENST00000429447 288 ntBASIC3.71□□□□□ -1.82
RORAP35398 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.71□□□□□ -1.82
RORAP35398 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.71□□□□□ -1.82
RORAP35398 AL356535.1-201ENST00000440335 398 ntBASIC3.71□□□□□ -1.82
RORAP35398 VN1R25P-201ENST00000443385 738 ntBASIC3.71□□□□□ -1.82
RORAP35398 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC3.71□□□□□ -1.82
RORAP35398 RPS15AP29-201ENST00000445539 400 ntBASIC3.71□□□□□ -1.82
RORAP35398 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC3.71□□□□□ -1.82
RORAP35398 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC3.71□□□□□ -1.82
RORAP35398 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC3.71□□□□□ -1.82
RORAP35398 VN1R40P-201ENST00000455196 941 ntBASIC3.71□□□□□ -1.82
RORAP35398 CYCSP53-201ENST00000455540 265 ntBASIC3.71□□□□□ -1.82
RORAP35398 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC3.71□□□□□ -1.82
RORAP35398 HESX1-202ENST00000473921 757 ntTSL 5 BASIC3.71□□□□□ -1.82
RORAP35398 AC078817.1-201ENST00000492623 435 ntBASIC3.71□□□□□ -1.82
RORAP35398 OR9N1P-202ENST00000494289 481 ntBASIC3.71□□□□□ -1.82
RORAP35398 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC3.71□□□□□ -1.82
RORAP35398 PTGES3P3-201ENST00000511479 482 ntBASIC3.71□□□□□ -1.82
RORAP35398 RN7SKP234-201ENST00000517173 224 ntBASIC3.71□□□□□ -1.82
RORAP35398 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3.71□□□□□ -1.82
RORAP35398 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.71□□□□□ -1.82
RORAP35398 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.71□□□□□ -1.82
RORAP35398 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.71□□□□□ -1.82
RORAP35398 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.71□□□□□ -1.82
RORAP35398 GNRHR2P1-201ENST00000555315 631 ntBASIC3.71□□□□□ -1.82
RORAP35398 CENPUP2-201ENST00000555897 1186 ntBASIC3.71□□□□□ -1.82
RORAP35398 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC3.71□□□□□ -1.82
RORAP35398 AC087499.8-201ENST00000578406 226 ntBASIC3.71□□□□□ -1.82
RORAP35398 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC3.71□□□□□ -1.82
RORAP35398 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC3.71□□□□□ -1.82
RORAP35398 AC012603.1-201ENST00000606424 528 ntBASIC3.71□□□□□ -1.82
RORAP35398 AC128687.2-201ENST00000609657 566 ntBASIC3.71□□□□□ -1.82
RORAP35398 MIR486-1-201ENST00000612171 68 ntBASIC3.71□□□□□ -1.82
RORAP35398 AC025016.1-201ENST00000616746 682 ntBASIC3.71□□□□□ -1.82
RORAP35398 AL591424.2-201ENST00000617023 128 ntBASIC3.71□□□□□ -1.82
RORAP35398 AC243756.2-201ENST00000618406 463 ntBASIC3.71□□□□□ -1.82
RORAP35398 U7.8-201ENST00000619968 63 ntBASIC3.71□□□□□ -1.82
RORAP35398 AC073530.2-201ENST00000623987 261 ntBASIC3.71□□□□□ -1.82
RORAP35398 AF001550.2-201ENST00000636643 217 ntBASIC3.71□□□□□ -1.82
RORAP35398 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
RORAP35398 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
RORAP35398 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
RORAP35398 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.7□□□□□ -1.82
RORAP35398 U1.1-201ENST00000384101 164 ntBASIC3.7□□□□□ -1.82
RORAP35398 HNRNPDP2-201ENST00000406475 478 ntBASIC3.7□□□□□ -1.82
RORAP35398 SNORA3.3-201ENST00000408712 125 ntBASIC3.7□□□□□ -1.82
RORAP35398 SNORA57.3-201ENST00000411095 141 ntBASIC3.7□□□□□ -1.82
RORAP35398 RAB9AP3-201ENST00000412737 573 ntBASIC3.7□□□□□ -1.82
RORAP35398 CR848007.2-201ENST00000424918 787 ntBASIC3.7□□□□□ -1.82
RORAP35398 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC3.7□□□□□ -1.82
RORAP35398 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.7□□□□□ -1.82
RORAP35398 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC3.7□□□□□ -1.82
RORAP35398 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.7□□□□□ -1.82
RORAP35398 RAB9AP1-201ENST00000449393 573 ntBASIC3.7□□□□□ -1.82
RORAP35398 MTND5P8-201ENST00000449817 1083 ntBASIC3.7□□□□□ -1.82
RORAP35398 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC3.7□□□□□ -1.82
RORAP35398 RPL23AP62-201ENST00000463396 453 ntBASIC3.7□□□□□ -1.82
RORAP35398 AC091153.1-201ENST00000466297 402 ntBASIC3.7□□□□□ -1.82
RORAP35398 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC3.7□□□□□ -1.82
RORAP35398 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.7□□□□□ -1.82
RORAP35398 AC109458.1-201ENST00000508858 316 ntBASIC3.7□□□□□ -1.82
RORAP35398 AC093853.1-201ENST00000515689 483 ntBASIC3.7□□□□□ -1.82
RORAP35398 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC3.7□□□□□ -1.82
RORAP35398 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.7□□□□□ -1.82
RORAP35398 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
RORAP35398 AC018754.1-201ENST00000607486 925 ntBASIC3.7□□□□□ -1.82
RORAP35398 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
RORAP35398 AC104307.1-201ENST00000616142 196 ntBASIC3.7□□□□□ -1.82
RORAP35398 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
RORAP35398 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
RORAP35398 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
RORAP35398 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.7□□□□□ -1.82
RORAP35398 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
RORAP35398 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.69□□□□□ -1.82
RORAP35398 AC009501.3-201ENST00000605001 1352 ntBASIC3.69□□□□□ -1.82
RORAP35398 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
RORAP35398 SNORA70E-201ENST00000384492 135 ntBASIC3.69□□□□□ -1.82
RORAP35398 U8.11-201ENST00000384699 133 ntBASIC3.69□□□□□ -1.82
RORAP35398 U8.12-201ENST00000384701 133 ntBASIC3.69□□□□□ -1.82
RORAP35398 MIR199A2-201ENST00000385289 110 ntBASIC3.69□□□□□ -1.82
RORAP35398 MIR670-201ENST00000390142 98 ntBASIC3.69□□□□□ -1.82
RORAP35398 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
RORAP35398 RNU2-37P-201ENST00000410695 177 ntBASIC3.69□□□□□ -1.82
RORAP35398 LINC01881-201ENST00000416103 412 ntBASIC3.69□□□□□ -1.82
RORAP35398 AC234782.4-201ENST00000417646 1048 ntBASIC3.69□□□□□ -1.82
RORAP35398 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.69□□□□□ -1.82
RORAP35398 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.69□□□□□ -1.82
RORAP35398 USP12PY-201ENST00000427677 1064 ntBASIC3.69□□□□□ -1.82
RORAP35398 GCA-203ENST00000429691 824 ntTSL 3 BASIC3.69□□□□□ -1.82
RORAP35398 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
RORAP35398 HMGB1P37-201ENST00000439613 609 ntBASIC3.69□□□□□ -1.82
RORAP35398 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC3.69□□□□□ -1.82
RORAP35398 VN1R34P-201ENST00000447387 883 ntBASIC3.69□□□□□ -1.82
RORAP35398 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms