Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 AC093815.1-201ENST00000508637 280 ntBASIC6.57□□□□□ -1.36
RXRBP28702 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
RXRBP28702 IMPA1P1-201ENST00000510718 842 ntBASIC6.57□□□□□ -1.36
RXRBP28702 TBCA-203ENST00000517679 545 ntTSL 3 BASIC6.57□□□□□ -1.36
RXRBP28702 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC6.57□□□□□ -1.36
RXRBP28702 PSMB7P1-201ENST00000556349 514 ntBASIC6.57□□□□□ -1.36
RXRBP28702 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC6.57□□□□□ -1.36
RXRBP28702 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
RXRBP28702 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC6.57□□□□□ -1.36
RXRBP28702 AC244107.2-201ENST00000611773 76 ntBASIC6.57□□□□□ -1.36
RXRBP28702 AL353726.1-201ENST00000614041 1000 ntBASIC6.57□□□□□ -1.36
RXRBP28702 AL158209.2-201ENST00000619266 216 ntBASIC6.57□□□□□ -1.36
RXRBP28702 AC112487.2-201ENST00000637950 304 ntBASIC6.57□□□□□ -1.36
RXRBP28702 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
RXRBP28702 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC6.57□□□□□ -1.36
RXRBP28702 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
RXRBP28702 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC6.56□□□□□ -1.36
RXRBP28702 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
RXRBP28702 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
RXRBP28702 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
RXRBP28702 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC6.56□□□□□ -1.36
RXRBP28702 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
RXRBP28702 RNU4-73P-201ENST00000363164 141 ntBASIC6.56□□□□□ -1.36
RXRBP28702 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
RXRBP28702 RNU1-74P-201ENST00000384108 171 ntBASIC6.56□□□□□ -1.36
RXRBP28702 ATP5HP3-201ENST00000396994 486 ntBASIC6.56□□□□□ -1.36
RXRBP28702 HMGB3P18-201ENST00000406327 590 ntBASIC6.56□□□□□ -1.36
RXRBP28702 AC114755.2-201ENST00000413520 361 ntBASIC6.56□□□□□ -1.36
RXRBP28702 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC6.56□□□□□ -1.36
RXRBP28702 RPL21P111-201ENST00000418453 477 ntBASIC6.56□□□□□ -1.36
RXRBP28702 MTND4LP10-201ENST00000435146 291 ntBASIC6.56□□□□□ -1.36
RXRBP28702 AC234064.1-201ENST00000436312 247 ntBASIC6.56□□□□□ -1.36
RXRBP28702 HSFY6P-201ENST00000445573 403 ntBASIC6.56□□□□□ -1.36
RXRBP28702 HMGB1P16-201ENST00000447155 540 ntBASIC6.56□□□□□ -1.36
RXRBP28702 AC005002.1-201ENST00000447458 540 ntBASIC6.56□□□□□ -1.36
RXRBP28702 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC6.56□□□□□ -1.36
RXRBP28702 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC6.56□□□□□ -1.36
RXRBP28702 RPL12P39-201ENST00000455456 496 ntBASIC6.56□□□□□ -1.36
RXRBP28702 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC6.56□□□□□ -1.36
RXRBP28702 RPS20P24-201ENST00000457473 361 ntBASIC6.56□□□□□ -1.36
RXRBP28702 SNORD42A-201ENST00000459584 64 ntBASIC6.56□□□□□ -1.36
RXRBP28702 RPS17P5-201ENST00000498293 408 ntBASIC6.56□□□□□ -1.36
RXRBP28702 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC6.56□□□□□ -1.36
RXRBP28702 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC6.56□□□□□ -1.36
RXRBP28702 OR5AQ1P-201ENST00000527596 927 ntBASIC6.56□□□□□ -1.36
RXRBP28702 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC6.56□□□□□ -1.36
RXRBP28702 AL442663.2-201ENST00000554385 511 ntBASIC6.56□□□□□ -1.36
RXRBP28702 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC6.56□□□□□ -1.36
RXRBP28702 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC6.56□□□□□ -1.36
RXRBP28702 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC6.56□□□□□ -1.36
RXRBP28702 VN1R79P-201ENST00000593540 513 ntBASIC6.56□□□□□ -1.36
RXRBP28702 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC6.56□□□□□ -1.36
RXRBP28702 FAM27B-201ENST00000610601 213 ntBASIC6.56□□□□□ -1.36
RXRBP28702 Xist_exon4.1-201ENST00000615964 126 ntBASIC6.56□□□□□ -1.36
RXRBP28702 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC6.56□□□□□ -1.36
RXRBP28702 AP003122.6-201ENST00000623831 495 ntBASIC6.56□□□□□ -1.36
RXRBP28702 AC009033.1-201ENST00000624279 431 ntBASIC6.56□□□□□ -1.36
RXRBP28702 AC135352.1-201ENST00000506173 1418 ntBASIC6.56□□□□□ -1.36
RXRBP28702 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
RXRBP28702 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
RXRBP28702 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
RXRBP28702 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
RXRBP28702 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
RXRBP28702 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
RXRBP28702 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC6.56□□□□□ -1.36
RXRBP28702 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC6.55□□□□□ -1.36
RXRBP28702 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
RXRBP28702 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC6.55□□□□□ -1.36
RXRBP28702 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
RXRBP28702 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
RXRBP28702 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
RXRBP28702 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
RXRBP28702 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
RXRBP28702 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC6.55□□□□□ -1.36
RXRBP28702 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
RXRBP28702 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
RXRBP28702 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC6.55□□□□□ -1.36
RXRBP28702 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC6.55□□□□□ -1.36
RXRBP28702 RPL23AP17-201ENST00000401064 499 ntBASIC6.55□□□□□ -1.36
RXRBP28702 RNA5SP317-201ENST00000410176 116 ntBASIC6.55□□□□□ -1.36
RXRBP28702 RNA5SP311-201ENST00000411290 116 ntBASIC6.55□□□□□ -1.36
RXRBP28702 BTF3L4P3-201ENST00000418879 476 ntBASIC6.55□□□□□ -1.36
RXRBP28702 RPL7AP25-201ENST00000423357 805 ntBASIC6.55□□□□□ -1.36
RXRBP28702 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC6.55□□□□□ -1.36
RXRBP28702 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC6.55□□□□□ -1.36
RXRBP28702 RPS25P9-201ENST00000435591 252 ntBASIC6.55□□□□□ -1.36
RXRBP28702 AC104850.1-201ENST00000435940 476 ntBASIC6.55□□□□□ -1.36
RXRBP28702 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
RXRBP28702 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC6.55□□□□□ -1.36
RXRBP28702 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC6.55□□□□□ -1.36
RXRBP28702 RPL7AP52-201ENST00000458096 790 ntBASIC6.55□□□□□ -1.36
RXRBP28702 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
RXRBP28702 AC015795.1-201ENST00000513669 327 ntBASIC6.55□□□□□ -1.36
RXRBP28702 RNA5SP315-201ENST00000516340 116 ntBASIC6.55□□□□□ -1.36
RXRBP28702 RNA5SP312-201ENST00000517068 116 ntBASIC6.55□□□□□ -1.36
RXRBP28702 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
RXRBP28702 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC6.55□□□□□ -1.36
RXRBP28702 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC6.55□□□□□ -1.36
RXRBP28702 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC6.55□□□□□ -1.36
RXRBP28702 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC6.55□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 130.4 ms