Protein–RNA interactions for Protein: P28068

HLA-DMB, HLA class II histocompatibility antigen, DM beta chain, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMBP28068 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC2.8□□□□□ -1.96
HLA-DMBP28068 AC007656.2-201ENST00000624902 4547 ntBASIC2.8□□□□□ -1.96
HLA-DMBP28068 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
HLA-DMBP28068 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC2.79□□□□□ -1.96
HLA-DMBP28068 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC2.79□□□□□ -1.96
HLA-DMBP28068 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
HLA-DMBP28068 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
HLA-DMBP28068 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC2.79□□□□□ -1.96
HLA-DMBP28068 DCAF13P1-201ENST00000495256 1330 ntBASIC2.79□□□□□ -1.96
HLA-DMBP28068 MIR200C-201ENST00000384980 68 ntBASIC2.79□□□□□ -1.96
HLA-DMBP28068 RNA5SP424-201ENST00000390988 115 ntBASIC2.79□□□□□ -1.96
HLA-DMBP28068 ATP5F1P3-201ENST00000397213 657 ntBASIC2.79□□□□□ -1.96
HLA-DMBP28068 SNORA3.3-201ENST00000408712 125 ntBASIC2.79□□□□□ -1.96
HLA-DMBP28068 RN7SKP156-201ENST00000410308 342 ntBASIC2.79□□□□□ -1.96
HLA-DMBP28068 AC007390.1-201ENST00000415722 356 ntBASIC2.79□□□□□ -1.96
HLA-DMBP28068 MTND2P15-201ENST00000418575 892 ntBASIC2.79□□□□□ -1.96
HLA-DMBP28068 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
HLA-DMBP28068 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC2.79□□□□□ -1.96
HLA-DMBP28068 AC002075.2-201ENST00000425207 252 ntBASIC2.79□□□□□ -1.96
HLA-DMBP28068 AL445584.1-201ENST00000431451 330 ntBASIC2.79□□□□□ -1.96
HLA-DMBP28068 AL035246.1-201ENST00000433554 1255 ntBASIC2.79□□□□□ -1.96
HLA-DMBP28068 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC2.79□□□□□ -1.96
HLA-DMBP28068 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC2.79□□□□□ -1.96
HLA-DMBP28068 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC2.79□□□□□ -1.96
HLA-DMBP28068 RPS29P31-201ENST00000446147 164 ntBASIC2.79□□□□□ -1.96
HLA-DMBP28068 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC2.79□□□□□ -1.96
HLA-DMBP28068 NANOGP10-201ENST00000453325 895 ntBASIC2.79□□□□□ -1.96
HLA-DMBP28068 UBDP1-202ENST00000457888 382 ntBASIC2.79□□□□□ -1.96
HLA-DMBP28068 NPM1P17-201ENST00000479221 602 ntBASIC2.79□□□□□ -1.96
HLA-DMBP28068 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC2.79□□□□□ -1.96
HLA-DMBP28068 AP002812.1-201ENST00000495378 474 ntBASIC2.79□□□□□ -1.96
HLA-DMBP28068 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC2.79□□□□□ -1.96
HLA-DMBP28068 SNX5P1-201ENST00000505757 1041 ntBASIC2.79□□□□□ -1.96
HLA-DMBP28068 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC2.79□□□□□ -1.96
HLA-DMBP28068 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC2.79□□□□□ -1.96
HLA-DMBP28068 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC2.79□□□□□ -1.96
HLA-DMBP28068 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC2.79□□□□□ -1.96
HLA-DMBP28068 AC117525.1-201ENST00000515228 503 ntBASIC2.79□□□□□ -1.96
HLA-DMBP28068 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC2.79□□□□□ -1.96
HLA-DMBP28068 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC2.79□□□□□ -1.96
HLA-DMBP28068 OR7E13P-201ENST00000526052 910 ntBASIC2.79□□□□□ -1.96
HLA-DMBP28068 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC2.79□□□□□ -1.96
HLA-DMBP28068 AC023161.2-201ENST00000551218 780 ntBASIC2.79□□□□□ -1.96
HLA-DMBP28068 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC2.79□□□□□ -1.96
HLA-DMBP28068 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC2.79□□□□□ -1.96
HLA-DMBP28068 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC2.79□□□□□ -1.96
HLA-DMBP28068 MIR3158-1-201ENST00000583596 81 ntBASIC2.79□□□□□ -1.96
HLA-DMBP28068 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC2.79□□□□□ -1.96
HLA-DMBP28068 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC2.79□□□□□ -1.96
HLA-DMBP28068 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC2.79□□□□□ -1.96
HLA-DMBP28068 AC011492.1-201ENST00000600023 315 ntBASIC2.79□□□□□ -1.96
HLA-DMBP28068 AP003117.1-201ENST00000602771 554 ntBASIC2.79□□□□□ -1.96
HLA-DMBP28068 AL163642.2-201ENST00000604722 1019 ntBASIC2.79□□□□□ -1.96
HLA-DMBP28068 MIR92B-201ENST00000607575 96 ntBASIC2.79□□□□□ -1.96
HLA-DMBP28068 AC099778.2-201ENST00000610904 211 ntBASIC2.79□□□□□ -1.96
HLA-DMBP28068 NF1P10-201ENST00000613227 742 ntBASIC2.79□□□□□ -1.96
HLA-DMBP28068 AC005344.1-201ENST00000613391 459 ntBASIC2.79□□□□□ -1.96
HLA-DMBP28068 AC007342.8-201ENST00000623278 678 ntBASIC2.79□□□□□ -1.96
HLA-DMBP28068 AC019080.5-201ENST00000624891 757 ntBASIC2.79□□□□□ -1.96
HLA-DMBP28068 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC2.79□□□□□ -1.96
HLA-DMBP28068 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC2.79□□□□□ -1.96
HLA-DMBP28068 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
HLA-DMBP28068 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
HLA-DMBP28068 AC000367.1-201ENST00000452711 1766 ntBASIC2.79□□□□□ -1.96
HLA-DMBP28068 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
HLA-DMBP28068 CD36-221ENST00000534394 1741 ntTSL 2 BASIC2.79□□□□□ -1.96
HLA-DMBP28068 AF127577.6-201ENST00000623352 2191 ntBASIC2.78□□□□□ -1.96
HLA-DMBP28068 AP004289.2-201ENST00000444413 1457 ntBASIC2.78□□□□□ -1.96
HLA-DMBP28068 AC024560.2-201ENST00000507981 1497 ntBASIC2.78□□□□□ -1.96
HLA-DMBP28068 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC2.78□□□□□ -1.96
HLA-DMBP28068 ZNF826P-207ENST00000622273 1910 ntBASIC2.78□□□□□ -1.96
HLA-DMBP28068 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
HLA-DMBP28068 SEPT7P7-201ENST00000420492 1301 ntBASIC2.78□□□□□ -1.96
HLA-DMBP28068 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
HLA-DMBP28068 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
HLA-DMBP28068 RAD1P1-201ENST00000231383 813 ntBASIC2.78□□□□□ -1.96
HLA-DMBP28068 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
HLA-DMBP28068 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
HLA-DMBP28068 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
HLA-DMBP28068 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
HLA-DMBP28068 RNU6-618P-201ENST00000363518 112 ntBASIC2.78□□□□□ -1.96
HLA-DMBP28068 MIR124-3-201ENST00000384866 87 ntBASIC2.78□□□□□ -1.96
HLA-DMBP28068 MIR184-201ENST00000384962 84 ntBASIC2.78□□□□□ -1.96
HLA-DMBP28068 RPL7P60-201ENST00000397636 735 ntBASIC2.78□□□□□ -1.96
HLA-DMBP28068 ZNF602P-201ENST00000405929 924 ntBASIC2.78□□□□□ -1.96
HLA-DMBP28068 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC2.78□□□□□ -1.96
HLA-DMBP28068 AL139247.1-201ENST00000422768 325 ntBASIC2.78□□□□□ -1.96
HLA-DMBP28068 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC2.78□□□□□ -1.96
HLA-DMBP28068 OR4F13P-201ENST00000428478 931 ntBASIC2.78□□□□□ -1.96
HLA-DMBP28068 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC2.78□□□□□ -1.96
HLA-DMBP28068 AL157827.1-201ENST00000447622 132 ntBASIC2.78□□□□□ -1.96
HLA-DMBP28068 AC006480.1-201ENST00000449887 378 ntBASIC2.78□□□□□ -1.96
HLA-DMBP28068 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC2.78□□□□□ -1.96
HLA-DMBP28068 TVP23BP2-201ENST00000455082 615 ntBASIC2.78□□□□□ -1.96
HLA-DMBP28068 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC2.78□□□□□ -1.96
HLA-DMBP28068 SNRPGP3-201ENST00000469405 227 ntBASIC2.78□□□□□ -1.96
HLA-DMBP28068 AC012170.1-201ENST00000495139 359 ntBASIC2.78□□□□□ -1.96
HLA-DMBP28068 SNORA67.7-201ENST00000516664 135 ntBASIC2.78□□□□□ -1.96
HLA-DMBP28068 RN7SKP82-201ENST00000516786 223 ntBASIC2.78□□□□□ -1.96
HLA-DMBP28068 RN7SKP60-201ENST00000516985 239 ntBASIC2.78□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms