Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC6.35□□□□□ -1.39
ERCC3P19447 RPL30P3-201ENST00000424262 333 ntBASIC6.35□□□□□ -1.39
ERCC3P19447 AC108075.1-201ENST00000424692 529 ntBASIC6.35□□□□□ -1.39
ERCC3P19447 ISCA1P1-201ENST00000426679 387 ntBASIC6.35□□□□□ -1.39
ERCC3P19447 CRIP1P1-201ENST00000427567 185 ntBASIC6.35□□□□□ -1.39
ERCC3P19447 RPEP2-201ENST00000432149 701 ntBASIC6.35□□□□□ -1.39
ERCC3P19447 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC6.35□□□□□ -1.39
ERCC3P19447 RABEPKP1-201ENST00000440529 1026 ntBASIC6.35□□□□□ -1.39
ERCC3P19447 RPL5P25-201ENST00000441148 775 ntBASIC6.35□□□□□ -1.39
ERCC3P19447 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC6.35□□□□□ -1.39
ERCC3P19447 MTCO3P20-201ENST00000454926 688 ntBASIC6.35□□□□□ -1.39
ERCC3P19447 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC6.35□□□□□ -1.39
ERCC3P19447 RNU6-718P-201ENST00000516166 105 ntBASIC6.35□□□□□ -1.39
ERCC3P19447 RN7SKP244-201ENST00000516513 307 ntBASIC6.35□□□□□ -1.39
ERCC3P19447 RNU6-714P-201ENST00000516963 103 ntBASIC6.35□□□□□ -1.39
ERCC3P19447 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC6.35□□□□□ -1.39
ERCC3P19447 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC6.35□□□□□ -1.39
ERCC3P19447 AC022832.1-201ENST00000530718 645 ntBASIC6.35□□□□□ -1.39
ERCC3P19447 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC6.35□□□□□ -1.39
ERCC3P19447 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC6.35□□□□□ -1.39
ERCC3P19447 AC127381.1-201ENST00000555979 939 ntBASIC6.35□□□□□ -1.39
ERCC3P19447 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
ERCC3P19447 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC6.35□□□□□ -1.39
ERCC3P19447 AP005119.2-201ENST00000579735 1105 ntBASIC6.35□□□□□ -1.39
ERCC3P19447 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC6.35□□□□□ -1.39
ERCC3P19447 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC6.35□□□□□ -1.39
ERCC3P19447 VN1R79P-201ENST00000593540 513 ntBASIC6.35□□□□□ -1.39
ERCC3P19447 AC008782.1-201ENST00000603386 430 ntBASIC6.35□□□□□ -1.39
ERCC3P19447 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC6.35□□□□□ -1.39
ERCC3P19447 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
ERCC3P19447 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
ERCC3P19447 OR9K1P-202ENST00000641111 3217 ntBASIC6.35□□□□□ -1.39
ERCC3P19447 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
ERCC3P19447 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC6.35□□□□□ -1.39
ERCC3P19447 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
ERCC3P19447 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC6.35□□□□□ -1.39
ERCC3P19447 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
ERCC3P19447 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC6.35□□□□□ -1.39
ERCC3P19447 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC6.35□□□□□ -1.39
ERCC3P19447 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC6.34□□□□□ -1.39
ERCC3P19447 AL137141.1-201ENST00000624622 4836 ntBASIC6.34□□□□□ -1.39
ERCC3P19447 AC068870.1-201ENST00000563737 2455 ntBASIC6.34□□□□□ -1.39
ERCC3P19447 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC6.34□□□□□ -1.39
ERCC3P19447 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC6.34□□□□□ -1.39
ERCC3P19447 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.39
ERCC3P19447 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
ERCC3P19447 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC6.34□□□□□ -1.39
ERCC3P19447 SNORA16A-201ENST00000384342 137 ntBASIC6.34□□□□□ -1.39
ERCC3P19447 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
ERCC3P19447 AL049697.2-201ENST00000403708 294 ntBASIC6.34□□□□□ -1.39
ERCC3P19447 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC6.34□□□□□ -1.39
ERCC3P19447 RPL36AP36-201ENST00000418616 301 ntBASIC6.34□□□□□ -1.39
ERCC3P19447 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC6.34□□□□□ -1.39
ERCC3P19447 AL590762.4-201ENST00000425885 253 ntBASIC6.34□□□□□ -1.39
ERCC3P19447 BX890604.2-201ENST00000427883 474 ntBASIC6.34□□□□□ -1.39
ERCC3P19447 MTND6P13-201ENST00000443510 523 ntBASIC6.34□□□□□ -1.39
ERCC3P19447 GAPDHP17-201ENST00000449858 1001 ntBASIC6.34□□□□□ -1.39
ERCC3P19447 AC093392.2-201ENST00000450682 337 ntBASIC6.34□□□□□ -1.39
ERCC3P19447 BX276092.4-201ENST00000452056 248 ntBASIC6.34□□□□□ -1.39
ERCC3P19447 AC098824.1-201ENST00000453565 980 ntBASIC6.34□□□□□ -1.39
ERCC3P19447 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC6.34□□□□□ -1.39
ERCC3P19447 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC6.34□□□□□ -1.39
ERCC3P19447 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC6.34□□□□□ -1.39
ERCC3P19447 RN7SKP277-201ENST00000516895 283 ntBASIC6.34□□□□□ -1.39
ERCC3P19447 RNU4ATAC10P-201ENST00000516967 122 ntBASIC6.34□□□□□ -1.39
ERCC3P19447 AC134698.4-201ENST00000523451 826 ntBASIC6.34□□□□□ -1.39
ERCC3P19447 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC6.34□□□□□ -1.39
ERCC3P19447 CENPUP2-201ENST00000555897 1186 ntBASIC6.34□□□□□ -1.39
ERCC3P19447 MEG8-218ENST00000556720 456 ntTSL 3 BASIC6.34□□□□□ -1.39
ERCC3P19447 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC6.34□□□□□ -1.39
ERCC3P19447 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC6.34□□□□□ -1.39
ERCC3P19447 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC6.34□□□□□ -1.39
ERCC3P19447 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC6.34□□□□□ -1.39
ERCC3P19447 AL513327.3-201ENST00000602618 469 ntBASIC6.34□□□□□ -1.39
ERCC3P19447 AC087763.1-201ENST00000603391 286 ntBASIC6.34□□□□□ -1.39
ERCC3P19447 AL161729.4-201ENST00000604650 476 ntBASIC6.34□□□□□ -1.39
ERCC3P19447 AL109618.2-201ENST00000605527 211 ntBASIC6.34□□□□□ -1.39
ERCC3P19447 AL133481.2-203ENST00000607558 139 ntBASIC6.34□□□□□ -1.39
ERCC3P19447 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC6.34□□□□□ -1.39
ERCC3P19447 AC068880.5-201ENST00000624331 290 ntBASIC6.34□□□□□ -1.39
ERCC3P19447 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC6.34□□□□□ -1.39
ERCC3P19447 AL596275.2-204ENST00000641628 552 ntBASIC6.34□□□□□ -1.39
ERCC3P19447 AL596275.2-206ENST00000641957 626 ntBASIC6.34□□□□□ -1.39
ERCC3P19447 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
ERCC3P19447 AC011493.1-201ENST00000596753 1632 ntBASIC6.34□□□□□ -1.39
ERCC3P19447 AC092125.1-201ENST00000562568 1995 ntBASIC6.34□□□□□ -1.39
ERCC3P19447 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC6.34□□□□□ -1.39
ERCC3P19447 Z95327.2-201ENST00000414579 1873 ntBASIC6.34□□□□□ -1.39
ERCC3P19447 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC6.34□□□□□ -1.39
ERCC3P19447 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
ERCC3P19447 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC6.34□□□□□ -1.39
ERCC3P19447 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC6.34□□□□□ -1.4
ERCC3P19447 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC6.34□□□□□ -1.4
ERCC3P19447 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
ERCC3P19447 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
ERCC3P19447 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC6.33□□□□□ -1.4
ERCC3P19447 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
ERCC3P19447 AC097714.1-201ENST00000511272 1647 ntBASIC6.33□□□□□ -1.4
ERCC3P19447 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
ERCC3P19447 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC6.33□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms