Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.27□□□□□ -1.57
ATF4P18848 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
ATF4P18848 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC5.27□□□□□ -1.57
ATF4P18848 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC5.27□□□□□ -1.57
ATF4P18848 ZNF806-201ENST00000438300 1774 ntBASIC5.27□□□□□ -1.57
ATF4P18848 AC114774.1-201ENST00000507410 1770 ntBASIC5.27□□□□□ -1.57
ATF4P18848 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
ATF4P18848 ECT2-201ENST00000232458 4087 ntAPPRIS P2 TSL 1 (best) BASIC5.26□□□□□ -1.57
ATF4P18848 AQP4-205ENST00000581374 1586 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
ATF4P18848 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
ATF4P18848 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC5.26□□□□□ -1.57
ATF4P18848 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.26□□□□□ -1.57
ATF4P18848 OR5A1-201ENST00000302030 1051 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
ATF4P18848 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
ATF4P18848 AC073343.1-201ENST00000328239 651 ntBASIC5.26□□□□□ -1.57
ATF4P18848 Y_RNA.70-201ENST00000362886 110 ntBASIC5.26□□□□□ -1.57
ATF4P18848 RNU6-511P-201ENST00000363496 107 ntBASIC5.26□□□□□ -1.57
ATF4P18848 RNA5SP114-201ENST00000363780 113 ntBASIC5.26□□□□□ -1.57
ATF4P18848 RNU6-641P-201ENST00000384006 107 ntBASIC5.26□□□□□ -1.57
ATF4P18848 OR2H1-204ENST00000396792 1294 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
ATF4P18848 AL359715.1-201ENST00000404330 555 ntBASIC5.26□□□□□ -1.57
ATF4P18848 MTERF4-205ENST00000407095 799 ntTSL 2 BASIC5.26□□□□□ -1.57
ATF4P18848 RNU2-39P-201ENST00000410604 198 ntBASIC5.26□□□□□ -1.57
ATF4P18848 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC5.26□□□□□ -1.57
ATF4P18848 AL157932.1-201ENST00000413246 363 ntTSL 3 BASIC5.26□□□□□ -1.57
ATF4P18848 UBE2FP1-201ENST00000416536 447 ntBASIC5.26□□□□□ -1.57
ATF4P18848 MTCO3P12-201ENST00000416718 547 ntBASIC5.26□□□□□ -1.57
ATF4P18848 RPL21P111-201ENST00000418453 477 ntBASIC5.26□□□□□ -1.57
ATF4P18848 RPS12P23-201ENST00000419579 400 ntBASIC5.26□□□□□ -1.57
ATF4P18848 RBM6-203ENST00000421682 684 ntTSL 2 BASIC5.26□□□□□ -1.57
ATF4P18848 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC5.26□□□□□ -1.57
ATF4P18848 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC5.26□□□□□ -1.57
ATF4P18848 AC010148.1-201ENST00000427619 707 ntTSL 3 BASIC5.26□□□□□ -1.57
ATF4P18848 OR2AS1P-201ENST00000427827 319 ntBASIC5.26□□□□□ -1.57
ATF4P18848 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC5.26□□□□□ -1.57
ATF4P18848 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC5.26□□□□□ -1.57
ATF4P18848 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC5.26□□□□□ -1.57
ATF4P18848 PA2G4P1-201ENST00000442248 1197 ntBASIC5.26□□□□□ -1.57
ATF4P18848 GAPDHP20-201ENST00000444107 1007 ntBASIC5.26□□□□□ -1.57
ATF4P18848 AC108463.2-201ENST00000451230 412 ntTSL 5 BASIC5.26□□□□□ -1.57
ATF4P18848 LINC01839-201ENST00000451348 727 ntTSL 3 BASIC5.26□□□□□ -1.57
ATF4P18848 OR52E7P-201ENST00000452394 933 ntBASIC5.26□□□□□ -1.57
ATF4P18848 AL391863.1-202ENST00000457427 612 ntTSL 5 BASIC5.26□□□□□ -1.57
ATF4P18848 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC5.26□□□□□ -1.57
ATF4P18848 DAP3-209ENST00000465375 729 ntTSL 2 BASIC5.26□□□□□ -1.57
ATF4P18848 AC006512.1-201ENST00000468816 291 ntBASIC5.26□□□□□ -1.57
ATF4P18848 AC091982.1-202ENST00000473923 343 ntBASIC5.26□□□□□ -1.57
ATF4P18848 AC106872.4-201ENST00000510050 523 ntBASIC5.26□□□□□ -1.57
ATF4P18848 PRMT5P1-201ENST00000514351 598 ntBASIC5.26□□□□□ -1.57
ATF4P18848 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC5.26□□□□□ -1.57
ATF4P18848 RNU6-835P-201ENST00000516974 104 ntBASIC5.26□□□□□ -1.57
ATF4P18848 HMGB1P41-201ENST00000520234 440 ntBASIC5.26□□□□□ -1.57
ATF4P18848 IGLVV-66-201ENST00000523818 341 ntBASIC5.26□□□□□ -1.57
ATF4P18848 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC5.26□□□□□ -1.57
ATF4P18848 SSU72P6-201ENST00000532644 488 ntBASIC5.26□□□□□ -1.57
ATF4P18848 LSM3P2-201ENST00000551246 273 ntBASIC5.26□□□□□ -1.57
ATF4P18848 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC5.26□□□□□ -1.57
ATF4P18848 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC5.26□□□□□ -1.57
ATF4P18848 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC5.26□□□□□ -1.57
ATF4P18848 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC5.26□□□□□ -1.57
ATF4P18848 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC5.26□□□□□ -1.57
ATF4P18848 IDH3A-223ENST00000561366 389 ntTSL 3 BASIC5.26□□□□□ -1.57
ATF4P18848 AL390718.1-201ENST00000566904 506 ntTSL 3 BASIC5.26□□□□□ -1.57
ATF4P18848 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC5.26□□□□□ -1.57
ATF4P18848 AC011193.2-201ENST00000582638 367 ntBASIC5.26□□□□□ -1.57
ATF4P18848 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.26□□□□□ -1.57
ATF4P18848 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC5.26□□□□□ -1.57
ATF4P18848 FKBP1AP1-201ENST00000594588 318 ntBASIC5.26□□□□□ -1.57
ATF4P18848 AC069234.5-201ENST00000611056 416 ntBASIC5.26□□□□□ -1.57
ATF4P18848 AL031777.2-201ENST00000611953 196 ntBASIC5.26□□□□□ -1.57
ATF4P18848 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC5.26□□□□□ -1.57
ATF4P18848 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC5.26□□□□□ -1.57
ATF4P18848 AC024940.5-201ENST00000622889 474 ntBASIC5.26□□□□□ -1.57
ATF4P18848 AC006065.5-201ENST00000623427 349 ntBASIC5.26□□□□□ -1.57
ATF4P18848 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC5.26□□□□□ -1.57
ATF4P18848 AC090337.1-201ENST00000579651 2074 ntBASIC5.26□□□□□ -1.57
ATF4P18848 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
ATF4P18848 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
ATF4P18848 CDY18P-201ENST00000438294 1609 ntBASIC5.26□□□□□ -1.57
ATF4P18848 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC5.26□□□□□ -1.57
ATF4P18848 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
ATF4P18848 AL356489.2-201ENST00000566968 3528 ntBASIC5.26□□□□□ -1.57
ATF4P18848 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC5.25□□□□□ -1.57
ATF4P18848 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
ATF4P18848 OR52B1P-201ENST00000316506 909 ntBASIC5.25□□□□□ -1.57
ATF4P18848 RPL7-201ENST00000352983 1101 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
ATF4P18848 RNU4-81P-201ENST00000363561 144 ntBASIC5.25□□□□□ -1.57
ATF4P18848 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
ATF4P18848 AL136372.1-201ENST00000403060 228 ntBASIC5.25□□□□□ -1.57
ATF4P18848 AL591416.1-201ENST00000404015 867 ntBASIC5.25□□□□□ -1.57
ATF4P18848 AL356776.1-201ENST00000406574 447 ntBASIC5.25□□□□□ -1.57
ATF4P18848 RNU6-373P-201ENST00000411247 98 ntBASIC5.25□□□□□ -1.57
ATF4P18848 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC5.25□□□□□ -1.57
ATF4P18848 AC079809.1-201ENST00000415468 276 ntBASIC5.25□□□□□ -1.57
ATF4P18848 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC5.25□□□□□ -1.57
ATF4P18848 AC016745.1-201ENST00000422178 508 ntTSL 5 BASIC5.25□□□□□ -1.57
ATF4P18848 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
ATF4P18848 EIF1P3-201ENST00000423841 334 ntBASIC5.25□□□□□ -1.57
ATF4P18848 AL513185.2-201ENST00000425543 193 ntBASIC5.25□□□□□ -1.57
ATF4P18848 GAPDHP59-201ENST00000435908 267 ntBASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms