Protein–RNA interactions for Protein: P16410

CTLA4, Cytotoxic T-lymphocyte protein 4, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4P16410 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.1□□□□□ -1.91
CTLA4P16410 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CTLA4P16410 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.1□□□□□ -1.91
CTLA4P16410 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CTLA4P16410 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.1□□□□□ -1.91
CTLA4P16410 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.1□□□□□ -1.91
CTLA4P16410 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.09□□□□□ -1.91
CTLA4P16410 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
CTLA4P16410 AL353743.4-201ENST00000422653 1547 ntBASIC3.09□□□□□ -1.91
CTLA4P16410 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CTLA4P16410 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.09□□□□□ -1.91
CTLA4P16410 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.09□□□□□ -1.91
CTLA4P16410 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.91
CTLA4P16410 PWAR6-201ENST00000552334 4618 ntBASIC3.09□□□□□ -1.91
CTLA4P16410 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.91
CTLA4P16410 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CTLA4P16410 MIR30E-201ENST00000362104 92 ntBASIC3.09□□□□□ -1.91
CTLA4P16410 RNU4-23P-201ENST00000362839 140 ntBASIC3.09□□□□□ -1.91
CTLA4P16410 CCNB2P1-201ENST00000399411 1150 ntBASIC3.09□□□□□ -1.91
CTLA4P16410 CYCSP19-201ENST00000411715 316 ntBASIC3.09□□□□□ -1.91
CTLA4P16410 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.09□□□□□ -1.91
CTLA4P16410 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC3.09□□□□□ -1.91
CTLA4P16410 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CTLA4P16410 MTCYBP21-201ENST00000443300 1113 ntBASIC3.09□□□□□ -1.91
CTLA4P16410 AL353898.1-201ENST00000444055 238 ntBASIC3.09□□□□□ -1.91
CTLA4P16410 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC3.09□□□□□ -1.91
CTLA4P16410 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.09□□□□□ -1.91
CTLA4P16410 AC004801.2-202ENST00000463559 283 ntBASIC3.09□□□□□ -1.91
CTLA4P16410 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
CTLA4P16410 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.09□□□□□ -1.91
CTLA4P16410 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC3.09□□□□□ -1.91
CTLA4P16410 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC3.09□□□□□ -1.91
CTLA4P16410 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.09□□□□□ -1.91
CTLA4P16410 SNORA70.19-201ENST00000516717 90 ntBASIC3.09□□□□□ -1.91
CTLA4P16410 RN7SKP60-201ENST00000516985 239 ntBASIC3.09□□□□□ -1.91
CTLA4P16410 IGKV2D-23-201ENST00000518179 286 ntBASIC3.09□□□□□ -1.91
CTLA4P16410 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC3.09□□□□□ -1.91
CTLA4P16410 NDUFB9P3-201ENST00000521269 501 ntBASIC3.09□□□□□ -1.91
CTLA4P16410 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.09□□□□□ -1.91
CTLA4P16410 OR4C2P-201ENST00000530855 1064 ntBASIC3.09□□□□□ -1.91
CTLA4P16410 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.09□□□□□ -1.91
CTLA4P16410 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC3.09□□□□□ -1.91
CTLA4P16410 AC106785.1-201ENST00000565935 262 ntBASIC3.09□□□□□ -1.91
CTLA4P16410 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.09□□□□□ -1.91
CTLA4P16410 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC3.09□□□□□ -1.91
CTLA4P16410 AC006116.10-201ENST00000591836 581 ntBASIC3.09□□□□□ -1.91
CTLA4P16410 AC010591.1-201ENST00000603941 649 ntBASIC3.09□□□□□ -1.91
CTLA4P16410 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC3.09□□□□□ -1.91
CTLA4P16410 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC3.09□□□□□ -1.91
CTLA4P16410 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.09□□□□□ -1.91
CTLA4P16410 AL592295.2-201ENST00000612578 206 ntBASIC3.09□□□□□ -1.91
CTLA4P16410 AL121772.2-201ENST00000614331 297 ntBASIC3.09□□□□□ -1.91
CTLA4P16410 AL731566.2-201ENST00000618971 317 ntBASIC3.09□□□□□ -1.91
CTLA4P16410 U7.8-201ENST00000619968 63 ntBASIC3.09□□□□□ -1.91
CTLA4P16410 AC007342.8-201ENST00000623278 678 ntBASIC3.09□□□□□ -1.91
CTLA4P16410 AC019080.5-201ENST00000624891 757 ntBASIC3.09□□□□□ -1.91
CTLA4P16410 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.09□□□□□ -1.91
CTLA4P16410 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CTLA4P16410 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
CTLA4P16410 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
CTLA4P16410 AL513302.2-201ENST00000562313 1842 ntBASIC3.09□□□□□ -1.92
CTLA4P16410 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.09□□□□□ -1.92
CTLA4P16410 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.92
CTLA4P16410 AL359715.4-201ENST00000606629 1436 ntBASIC3.09□□□□□ -1.92
CTLA4P16410 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CTLA4P16410 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.08□□□□□ -1.92
CTLA4P16410 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CTLA4P16410 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CTLA4P16410 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.08□□□□□ -1.92
CTLA4P16410 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.08□□□□□ -1.92
CTLA4P16410 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
CTLA4P16410 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
CTLA4P16410 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CTLA4P16410 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
CTLA4P16410 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC3.08□□□□□ -1.92
CTLA4P16410 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
CTLA4P16410 AP002088.1-201ENST00000382740 395 ntBASIC3.08□□□□□ -1.92
CTLA4P16410 RNU6-55P-201ENST00000411092 107 ntBASIC3.08□□□□□ -1.92
CTLA4P16410 RNU6-954P-201ENST00000411355 107 ntBASIC3.08□□□□□ -1.92
CTLA4P16410 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.08□□□□□ -1.92
CTLA4P16410 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.08□□□□□ -1.92
CTLA4P16410 RPL31P45-201ENST00000419532 356 ntBASIC3.08□□□□□ -1.92
CTLA4P16410 CBX1P4-201ENST00000439415 457 ntBASIC3.08□□□□□ -1.92
CTLA4P16410 AL157827.1-201ENST00000447622 132 ntBASIC3.08□□□□□ -1.92
CTLA4P16410 PPIAP3-201ENST00000450588 505 ntBASIC3.08□□□□□ -1.92
CTLA4P16410 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC3.08□□□□□ -1.92
CTLA4P16410 RPS4XP2-201ENST00000458402 793 ntBASIC3.08□□□□□ -1.92
CTLA4P16410 SNORD105B-201ENST00000458770 79 ntBASIC3.08□□□□□ -1.92
CTLA4P16410 ACTR3P3-201ENST00000480448 893 ntBASIC3.08□□□□□ -1.92
CTLA4P16410 RPL30P11-201ENST00000495304 339 ntBASIC3.08□□□□□ -1.92
CTLA4P16410 AC068305.1-201ENST00000497406 726 ntBASIC3.08□□□□□ -1.92
CTLA4P16410 MTATP6P22-201ENST00000507369 598 ntBASIC3.08□□□□□ -1.92
CTLA4P16410 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC3.08□□□□□ -1.92
CTLA4P16410 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.08□□□□□ -1.92
CTLA4P16410 RN7SKP18-201ENST00000516005 275 ntBASIC3.08□□□□□ -1.92
CTLA4P16410 AC067904.2-201ENST00000517322 1283 ntBASIC3.08□□□□□ -1.92
CTLA4P16410 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.08□□□□□ -1.92
CTLA4P16410 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC3.08□□□□□ -1.92
CTLA4P16410 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.08□□□□□ -1.92
CTLA4P16410 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms