Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 RNU1-68P-201ENST00000615382 146 ntBASIC3.69□□□□□ -1.82
COL11A1P12107 U1.39-201ENST00000621562 146 ntBASIC3.69□□□□□ -1.82
COL11A1P12107 AC099654.11-201ENST00000638857 294 ntBASIC3.69□□□□□ -1.82
COL11A1P12107 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
COL11A1P12107 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
COL11A1P12107 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
COL11A1P12107 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
COL11A1P12107 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.68□□□□□ -1.82
COL11A1P12107 AC027287.1-201ENST00000553115 1453 ntBASIC3.68□□□□□ -1.82
COL11A1P12107 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
COL11A1P12107 AC009263.1-201ENST00000441193 1239 ntBASIC3.68□□□□□ -1.82
COL11A1P12107 PCBP2P3-201ENST00000509726 843 ntBASIC3.68□□□□□ -1.82
COL11A1P12107 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.68□□□□□ -1.82
COL11A1P12107 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC3.68□□□□□ -1.82
COL11A1P12107 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.68□□□□□ -1.82
COL11A1P12107 AL162574.2-201ENST00000614618 657 ntBASIC3.68□□□□□ -1.82
COL11A1P12107 XKRY2-202ENST00000623874 1581 ntBASIC3.68□□□□□ -1.82
COL11A1P12107 XKRY-202ENST00000624960 1581 ntBASIC3.68□□□□□ -1.82
COL11A1P12107 AC244205.2-202ENST00000635781 342 ntBASIC3.68□□□□□ -1.82
COL11A1P12107 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC3.68□□□□□ -1.82
COL11A1P12107 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
COL11A1P12107 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.68□□□□□ -1.82
COL11A1P12107 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
COL11A1P12107 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.68□□□□□ -1.82
COL11A1P12107 AL132656.3-201ENST00000606384 1595 ntBASIC3.68□□□□□ -1.82
COL11A1P12107 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
COL11A1P12107 AC073325.2-201ENST00000339545 159 ntBASIC3.67□□□□□ -1.82
COL11A1P12107 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.67□□□□□ -1.82
COL11A1P12107 LAP3P1-201ENST00000403648 294 ntBASIC3.67□□□□□ -1.82
COL11A1P12107 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC3.67□□□□□ -1.82
COL11A1P12107 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
COL11A1P12107 TRGV5P-201ENST00000419915 354 ntBASIC3.67□□□□□ -1.82
COL11A1P12107 RPL35AP12-201ENST00000425362 338 ntBASIC3.67□□□□□ -1.82
COL11A1P12107 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC3.67□□□□□ -1.82
COL11A1P12107 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.67□□□□□ -1.82
COL11A1P12107 RNF148-202ENST00000447240 839 ntTSL 2 BASIC3.67□□□□□ -1.82
COL11A1P12107 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.67□□□□□ -1.82
COL11A1P12107 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.67□□□□□ -1.82
COL11A1P12107 AC138409.2-202ENST00000507274 458 ntBASIC3.67□□□□□ -1.82
COL11A1P12107 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.67□□□□□ -1.82
COL11A1P12107 OR10D4P-201ENST00000525892 951 ntBASIC3.67□□□□□ -1.82
COL11A1P12107 PSMA2P1-201ENST00000526365 646 ntBASIC3.67□□□□□ -1.82
COL11A1P12107 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
COL11A1P12107 HSPA8P17-201ENST00000427029 1382 ntBASIC3.67□□□□□ -1.82
COL11A1P12107 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
COL11A1P12107 ZNF807-201ENST00000328088 1707 ntBASIC3.67□□□□□ -1.82
COL11A1P12107 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
COL11A1P12107 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.67□□□□□ -1.82
COL11A1P12107 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC3.67□□□□□ -1.82
COL11A1P12107 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
COL11A1P12107 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
COL11A1P12107 MTCO1P7-201ENST00000419523 1542 ntBASIC3.67□□□□□ -1.82
COL11A1P12107 ZDHHC20P2-201ENST00000424108 429 ntBASIC3.67□□□□□ -1.82
COL11A1P12107 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC3.67□□□□□ -1.82
COL11A1P12107 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.67□□□□□ -1.82
COL11A1P12107 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.67□□□□□ -1.82
COL11A1P12107 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC3.67□□□□□ -1.82
COL11A1P12107 AC011825.1-201ENST00000484967 388 ntBASIC3.67□□□□□ -1.82
COL11A1P12107 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.67□□□□□ -1.82
COL11A1P12107 AC026801.2-201ENST00000515352 425 ntBASIC3.67□□□□□ -1.82
COL11A1P12107 IGLVIV-53-201ENST00000520107 367 ntBASIC3.67□□□□□ -1.82
COL11A1P12107 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC3.67□□□□□ -1.82
COL11A1P12107 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.67□□□□□ -1.82
COL11A1P12107 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC3.67□□□□□ -1.82
COL11A1P12107 LARP7P3-201ENST00000579888 337 ntBASIC3.67□□□□□ -1.82
COL11A1P12107 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC3.67□□□□□ -1.82
COL11A1P12107 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
COL11A1P12107 AC007496.3-201ENST00000624987 3443 ntBASIC3.67□□□□□ -1.82
COL11A1P12107 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC3.67□□□□□ -1.82
COL11A1P12107 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
COL11A1P12107 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.66□□□□□ -1.82
COL11A1P12107 AC026523.2-201ENST00000625039 7739 ntBASIC3.66□□□□□ -1.82
COL11A1P12107 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
COL11A1P12107 MTND4LP20-201ENST00000402379 270 ntBASIC3.66□□□□□ -1.82
COL11A1P12107 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
COL11A1P12107 USP9YP36-201ENST00000424581 829 ntBASIC3.66□□□□□ -1.82
COL11A1P12107 USP9YP31-201ENST00000431405 881 ntBASIC3.66□□□□□ -1.82
COL11A1P12107 AL513175.1-201ENST00000431492 780 ntBASIC3.66□□□□□ -1.82
COL11A1P12107 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC3.66□□□□□ -1.82
COL11A1P12107 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.66□□□□□ -1.82
COL11A1P12107 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
COL11A1P12107 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.66□□□□□ -1.82
COL11A1P12107 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.66□□□□□ -1.82
COL11A1P12107 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.66□□□□□ -1.82
COL11A1P12107 CEP170P1-201ENST00000502249 4587 ntBASIC3.66□□□□□ -1.82
COL11A1P12107 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
COL11A1P12107 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
COL11A1P12107 PROS2P-201ENST00000474651 1951 ntBASIC3.66□□□□□ -1.82
COL11A1P12107 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.66□□□□□ -1.82
COL11A1P12107 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
COL11A1P12107 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
COL11A1P12107 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
COL11A1P12107 AC062016.1-201ENST00000355719 319 ntBASIC3.65□□□□□ -1.82
COL11A1P12107 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC3.65□□□□□ -1.82
COL11A1P12107 AC008264.1-201ENST00000447612 367 ntBASIC3.65□□□□□ -1.82
COL11A1P12107 DNAJC19P1-201ENST00000455312 319 ntBASIC3.65□□□□□ -1.82
COL11A1P12107 RPL23AP67-201ENST00000465341 474 ntBASIC3.65□□□□□ -1.82
COL11A1P12107 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC3.65□□□□□ -1.82
COL11A1P12107 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.65□□□□□ -1.82
COL11A1P12107 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.65□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms